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CmoCh15G008610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G008610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein SIS2
Genome locationCmo_Chr15:4359760..4362200
RNA-Seq ExpressionCmoCh15G008610
SyntenyCmoCh15G008610
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579120.1 hypothetical protein SDJN03_23568, partial [Cucurbita argyrosperma subsp. sororia]6.0e-5995.56Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRAFFPHSTLPV+PARAFFRPSKLSPAVRF GD SAVK LRLVTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFL ELALNQAI
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
        MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV

KAG7016644.1 hypothetical protein SDJN02_21754 [Cucurbita argyrosperma subsp. argyrosperma]6.0e-5994.85Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEE-LALNQA
        MARLLISTRAFFPHSTLPV+PARAFFRPSKLSPAVRF GD SAVK LRLVTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFLEE LALNQA
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEE-LALNQA

Query:  IMEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
        IMEEDEENKDDGSGISFEEKP LPRTRNRPKREAEV
Subjt:  IMEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV

XP_022938548.1 uncharacterized protein LOC111444753 [Cucurbita moschata]1.4e-63100Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
        MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV

XP_022993784.1 uncharacterized protein LOC111489690 [Cucurbita maxima]1.6e-5994.81Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRAFFPHSTLPV PARA FRPSKLSPAVRF GD SAVKTLR+VTTRAGASTSSYIFAFSI FSL+LVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
        MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV

XP_023551003.1 uncharacterized protein LOC111808971 [Cucurbita pepo subsp. pepo]1.4e-6096.3Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRAFFPHSTLPVAPARAFFRPSK  PAVRF GD SAVKTLRLVTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
        MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV

TrEMBL top hitse value%identityAlignment
A0A1S3CQ37 uncharacterized protein LOC1035034022.7e-4477.04Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
        MAR LISTR  FP S+LP+AP RAFFRP   SP VRF    S  +TLR+V TRAGASTSSYIFAFSIP SL+L+T LTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
        MEEDE+ + DG+ ISFEEKP LPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV

A0A6J1FJ66 uncharacterized protein LOC1114447536.7e-64100Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
        MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV

A0A6J1HEK5 uncharacterized protein LOC1114623101.3e-5187.31Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRA FP   LP+ PARAFFRPSKLSPAVRF GD SA + LR+VTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAE
        MEEDEENKD  S I FEEKPALPRTRNRPKREAE
Subjt:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAE

A0A6J1JTZ0 uncharacterized protein LOC1114874918.5e-5187.22Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRAF      P+ PARAFFRPSKLSPAVRF GD SA +TLR+VTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREA
        MEEDEENKD  S ISFEEKPALPRTRNRPKREA
Subjt:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREA

A0A6J1K146 uncharacterized protein LOC1114896907.7e-6094.81Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRAFFPHSTLPV PARA FRPSKLSPAVRF GD SAVKTLR+VTTRAGASTSSYIFAFSI FSL+LVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
        MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSGISFEEKPALPRTRNRPKREAEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1533.0e-1641.38Show/hide
Query:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFP---------GDLSAVKTLR--LVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKK
        MARL +S         +P+ P +  F  S   P +  P         G L   + +R   V TRAG STSSY+ AF+IP +L+  T  T++KI D LD+ 
Subjt:  MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFP---------GDLSAVKTLR--LVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKK

Query:  FLEELALNQAI--MEEDEENKDDGSGISFEEKPALPRTRNRPKRE
        FLE++ALNQAI   E+ E  + D S     ++P L RTRNRPKRE
Subjt:  FLEELALNQAI--MEEDEENKDDGSGISFEEKPALPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGCTCCTTATCTCGACACGAGCCTTCTTCCCCCATTCCACTCTCCCCGTCGCTCCGGCGCGGGCATTCTTCAGACCTTCCAAATTGTCGCCGGCGGTC
AGATTCCCCGGCGATCTATCGGCGGTCAAAACCCTACGACTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCTATTCCGTTCTCT
CTCGTTCTCGTCACTGCCCTCACCGCTCTTAAGATCGGCGATAACCTCGACAAGAAATTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAG
GAAAACAAAGATGATGGTTCAGGAATATCTTTCGAAGAAAAACCAGCCCTTCCACGAACTCGCAACCGCCCTAAAAGGGAAGCCGAGGTATGA
mRNA sequenceShow/hide mRNA sequence
CACTTCAAGAGCTATGGCGAGGCTCCTTATCTCGACACGAGCCTTCTTCCCCCATTCCACTCTCCCCGTCGCTCCGGCGCGGGCATTCTTCAGACCTTCCAAATT
GTCGCCGGCGGTCAGATTCCCCGGCGATCTATCGGCGGTCAAAACCCTACGACTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTC
TATTCCGTTCTCTCTCGTTCTCGTCACTGCCCTCACCGCTCTTAAGATCGGCGATAACCTCGACAAGAAATTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCAT
GGAGGAAGATGAGGAAAACAAAGATGATGGTTCAGGAATATCTTTCGAAGAAAAACCAGCCCTTCCACGAACTCGCAACCGCCCTAAAAGGGAAGCCGAGGTATG
AATAATTGCTTTGTTTTTTTTGGAGGTGTTCATATGATTGGATTAGACGGCTGAGAAATGGGCAAGGAACTTGGAAACTTCCCTGTATATTGTAGATATACATTA
TCAATACAATAAAACTACCATACTGCATGTTCATTTGTTATCAAGTCTGTAACTGGTATATCATATCAATTAGAAATGACATACCAATGATATTTGAAATTGTCG
GTCTGAAGCATTGAGTGTTTTAGAAAAGTTTATTTACTTGGTAGAAATTCAGTTGGCTTTTAATGCAAGATATAATGTAGTCAAGATGTAGGTGTATTTCTTACC
ACCTAAGCTTCTACACTCTGCAAATAGGCAACAAACGTTGAATGACCTCTATGTTCTGCTGTAGTTGAAATTGTTTTTTATCCCTCTCTCTCATAAATATTTACA
TTTCCATTAACTTTTCACTTTCTACTTTCGAGACTATTTGTTGTTACCTTGTTGTTTCAAACTCTAAGGAGGTCATATTGGAAA
Protein sequenceShow/hide protein sequence
MARLLISTRAFFPHSTLPVAPARAFFRPSKLSPAVRFPGDLSAVKTLRLVTTRAGASTSSYIFAFSIPFSLVLVTALTALKIGDNLDKKFLEELALNQAIMEEDE
ENKDDGSGISFEEKPALPRTRNRPKREAEV