; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G008670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G008670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionflowering time control protein FY
Genome locationCmo_Chr15:4403690..4411957
RNA-Seq ExpressionCmoCh15G008670
SyntenyCmoCh15G008670
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579125.1 Flowering time control protein FY, partial [Cucurbita argyrosperma subsp. sororia]8.2e-13197.93Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
        MYGDPQQFQQ   Q QQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP PPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM

Query:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
        QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
Subjt:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM

Query:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

KAG7016649.1 Flowering time control protein FY [Cucurbita argyrosperma subsp. argyrosperma]2.8e-13192.69Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
        MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP PPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM

Query:  Q------------------IRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQ
        Q                  IRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQ
Subjt:  Q------------------IRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQ

Query:  SFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        SFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  SFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

XP_022938942.1 flowering time control protein FY-like isoform X1 [Cucurbita moschata]1.4e-135100Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
        MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM

Query:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
        QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
Subjt:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM

Query:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

XP_022993788.1 flowering time control protein FY isoform X1 [Cucurbita maxima]3.1e-13097.52Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
        MYGDPQQFQ    QQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP PPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM

Query:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
        QIRMWQRDS DRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
Subjt:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM

Query:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

XP_023550001.1 flowering time control protein FY-like isoform X1 [Cucurbita pepo subsp. pepo]8.2e-13197.93Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
        MYGDPQQFQQ   Q QQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP PPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM

Query:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
        QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
Subjt:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM

Query:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

TrEMBL top hitse value%identityAlignment
A0A1S3CQ38 flowering time control protein FY9.1e-12895.88Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP-PPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRY
        MYGDPQQFQQQ   QQ PNQHPLGGDF RGPPP GPPMMRQPSASSTTLAPEFQQHHHPRHPSGP PPPYEAHGDSF AKRMRKLTQRRAVDYTSTVVRY
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP-PPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRY

Query:  MQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRS
        MQ+RMWQRDSKDRTVLQSTPAA+IDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRS
Subjt:  MQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRS

Query:  MVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        MVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  MVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

A0A5A7U778 Flowering time control protein FY2.6e-12795.47Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP-PPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRY
        MYGDPQQFQQQ   QQ PNQHPLGGDF RGPPP GPPMMRQPSASSTTLAPEFQQHHHPRHPSGP PPPYEAHGDSF AKRMRKLTQRRAVDYTSTVVR+
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP-PPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRY

Query:  MQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRS
        MQ+RMWQRDSKDRTVLQSTPAA+IDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRS
Subjt:  MQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRS

Query:  MVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        MVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  MVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

A0A6J1CX97 flowering time control protein FY2.6e-12795.06Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP-PPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRY
        MYGDPQQFQQ Q  QQQPNQHPLGGDF RGPPP GPPMMRQPSASSTTLAPEFQQHHHPRHPSGP PPPY+AHGD+F AKRMRKLTQRRAVDYTSTVVRY
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP-PPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRY

Query:  MQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRS
        MQ+RM QRDSKDRTVLQSTPAA+IDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRS
Subjt:  MQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRS

Query:  MVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        MVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  MVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

A0A6J1FFG6 flowering time control protein FY-like isoform X17.0e-136100Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
        MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM

Query:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
        QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
Subjt:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM

Query:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

A0A6J1K3B2 flowering time control protein FY isoform X11.5e-13097.52Show/hide
Query:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
        MYGDPQQFQ    QQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGP PPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM
Subjt:  MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYM

Query:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
        QIRMWQRDS DRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM
Subjt:  QIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM

Query:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Subjt:  VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

SwissProt top hitse value%identityAlignment
Q6NLV4 Flowering time control protein FY3.5e-9277.63Show/hide
Query:  GGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASI
        GGD  RG     PPMMRQ SASST + P++       HPSG   P++ + DSFGAKRMRK TQRRAVDYTSTVVRY+Q R WQRDS+DRT LQ TPAA++
Subjt:  GGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASI

Query:  DMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQN
        DMLP  AYSDNPSTSFAAKFVH S+NKNRCSINRVLWTP+GRRLITGSQSGEFTLWNGQSFNFEMILQAHDQ IRSMVWSHN+N+MVSGDDGG++KYWQN
Subjt:  DMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQN

Query:  NMNNVKANKSAHKESVRDL
        NMNNVKANK+AHKES+RDL
Subjt:  NMNNVKANKSAHKESVRDL

Q7RY68 Polyadenylation factor subunit 27.1e-3750Show/hide
Query:  RKLTQRRAVDYTSTVVRYMQIRMWQ-RDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWN
        R   +R   DY ++VV YM+ R  + R S    V + +P+  +DMLPP A   NP+ S  ++ +H+S+NK +  IN V WTP GRRL+T S SGEFTLWN
Subjt:  RKLTQRRAVDYTSTVVRYMQIRMWQ-RDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWN

Query:  GQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        G  FNFE I+QAHD AIR++V+SH+D+W+VS D  G IKYWQ N NNV++ +  H + +RDL
Subjt:  GQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

Q8K4P0 pre-mRNA 3' end processing protein WDR331.3e-4648.21Show/hide
Query:  PEFQQHHHPRHPSGPPPPYEAHGD----SFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHT
        P F QH  PR      P +         +F  KRMRK   R+ +DY  +V++Y++ R+WQRD +D   +Q       D++PP    +NP  +   KFV T
Subjt:  PEFQQHHHPRHPSGPPPPYEAHGD----SFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHT

Query:  SINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRD
        S NK +C +  V WTP GRRL+TG+ SGEFTLWNG +FNFE ILQAHD  +R+M WSHND WM++ D GG +KYWQ+NMNNVK  + AHKE++R+
Subjt:  SINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRD

Q9C0J8 pre-mRNA 3' end processing protein WDR331.3e-4648.21Show/hide
Query:  PEFQQHHHPRHPSGPPPPYEAHGD----SFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHT
        P F QH  PR      P +         +F  KRMRK   R+ +DY  +V++Y++ R+WQRD +D   +Q       D++PP    +NP  +   KFV T
Subjt:  PEFQQHHHPRHPSGPPPPYEAHGD----SFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHT

Query:  SINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRD
        S NK +C +  V WTP GRRL+TG+ SGEFTLWNG +FNFE ILQAHD  +R+M WSHND WM++ D GG +KYWQ+NMNNVK  + AHKE++R+
Subjt:  SINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRD

Q9UTN4 Polyadenylation factor subunit 22.5e-3446.06Show/hide
Query:  AKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFT
        A+ ++K   RR VDY S + +Y+  R  + +     V +  P   I++ PP  Y  N ++S   K++HTS NK R  IN V WTP GRRL+TGS +GEFT
Subjt:  AKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFT

Query:  LWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
        LWNG +FNFE+I Q+HD A+R   WS +  W++SGD GG +KY++ N+NNVK    AH+  VRD+
Subjt:  LWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL

Arabidopsis top hitse value%identityAlignment
AT5G13480.1 Transducin/WD40 repeat-like superfamily protein2.5e-9377.63Show/hide
Query:  GGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASI
        GGD  RG     PPMMRQ SASST + P++       HPSG   P++ + DSFGAKRMRK TQRRAVDYTSTVVRY+Q R WQRDS+DRT LQ TPAA++
Subjt:  GGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSKDRTVLQSTPAASI

Query:  DMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQN
        DMLP  AYSDNPSTSFAAKFVH S+NKNRCSINRVLWTP+GRRLITGSQSGEFTLWNGQSFNFEMILQAHDQ IRSMVWSHN+N+MVSGDDGG++KYWQN
Subjt:  DMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQN

Query:  NMNNVKANKSAHKESVRDL
        NMNNVKANK+AHKES+RDL
Subjt:  NMNNVKANKSAHKESVRDL

AT5G13480.2 Transducin/WD40 repeat-like superfamily protein7.7e-8771.49Show/hide
Query:  MMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYMQI-----------------------RMWQRDSKDRTV
        MMRQ SASST + P++       HPSG   P++ + DSFGAKRMRK TQRRAVDYTSTVVRY+Q                        R WQRDS+DRT 
Subjt:  MMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYMQI-----------------------RMWQRDSKDRTV

Query:  LQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDD
        LQ TPAA++DMLP  AYSDNPSTSFAAKFVH S+NKNRCSINRVLWTP+GRRLITGSQSGEFTLWNGQSFNFEMILQAHDQ IRSMVWSHN+N+MVSGDD
Subjt:  LQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDD

Query:  GGSIKYWQNNMNNVKANKSAHKESVRDL
        GG++KYWQNNMNNVKANK+AHKES+RDL
Subjt:  GGSIKYWQNNMNNVKANKSAHKESVRDL

AT5G64630.1 Transducin/WD40 repeat-like superfamily protein6.7e-0626.17Show/hide
Query:  PSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLW------NGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNV
        PS S+      +S+  + C++N + ++P+G  L +G+  GE  +W        QS+     L  H + +  + WS +D +++SG    S   W  N  +V
Subjt:  PSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLW------NGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNV

Query:  KANKSAH
             AH
Subjt:  KANKSAH

AT5G64630.2 Transducin/WD40 repeat-like superfamily protein6.7e-0626.17Show/hide
Query:  PSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLW------NGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNV
        PS S+      +S+  + C++N + ++P+G  L +G+  GE  +W        QS+     L  H + +  + WS +D +++SG    S   W  N  +V
Subjt:  PSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLW------NGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNV

Query:  KANKSAH
             AH
Subjt:  KANKSAH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGTGATCCCCAGCAGTTTCAGCAGCAGCAGCATCAACAGCAGCAGCCGAATCAGCATCCTCTTGGTGGGGATTTCCCAAGAGGCCCGCCCCCGTCAGGG
CCACCCATGATGAGGCAGCCGTCTGCCTCTTCGACTACACTCGCTCCGGAGTTTCAACAGCACCATCATCCTCGACACCCATCTGGCCCTCCTCCTCCTTACGAA
GCCCATGGGGATAGTTTTGGTGCAAAAAGAATGAGGAAGCTTACTCAAAGGAGAGCAGTCGATTATACTAGTACTGTCGTGCGCTATATGCAGATCCGTATGTGG
CAACGAGATTCAAAGGATAGGACTGTGTTGCAATCAACTCCAGCAGCATCGATTGATATGTTGCCACCAGCTGCCTATTCAGATAATCCATCTACAAGCTTTGCC
GCTAAATTTGTCCATACATCAATCAACAAAAATCGTTGTTCCATCAATAGAGTGTTGTGGACTCCTACAGGGAGACGTCTGATTACAGGCTCACAAAGTGGTGAA
TTTACCCTTTGGAATGGACAGTCGTTCAATTTTGAAATGATTCTTCAGGCTCATGATCAAGCAATTAGGTCTATGGTATGGAGTCACAATGACAACTGGATGGTC
TCTGGTGATGATGGGGGCTCAATAAAGTATTGGCAAAATAACATGAATAATGTGAAGGCGAATAAATCAGCTCATAAAGAATCAGTTCGGGACTTGAGGTAG
mRNA sequenceShow/hide mRNA sequence
TTGGCCCCCGCCCTTCTGGAGGCCGAAAACTGAAAACCCTGACACAGCAGCTGAGATCGTTCAGAAGAACCAGGTTACAGATAAATTGTTTAGGGTTTAAGGGTC
TTCAACTCTTTATTCAATCCTCTTCTCTACATTTCTTCTCAATCTCCTCTCTTCTTCTACATACAACATTTCCCTTTCAATCGTTACCTTCAATCACGTTAGTTT
CAGCGTATACAACATGTACGGTGATCCCCAGCAGTTTCAGCAGCAGCAGCATCAACAGCAGCAGCCGAATCAGCATCCTCTTGGTGGGGATTTCCCAAGAGGCCC
GCCCCCGTCAGGGCCACCCATGATGAGGCAGCCGTCTGCCTCTTCGACTACACTCGCTCCGGAGTTTCAACAGCACCATCATCCTCGACACCCATCTGGCCCTCC
TCCTCCTTACGAAGCCCATGGGGATAGTTTTGGTGCAAAAAGAATGAGGAAGCTTACTCAAAGGAGAGCAGTCGATTATACTAGTACTGTCGTGCGCTATATGCA
GATCCGTATGTGGCAACGAGATTCAAAGGATAGGACTGTGTTGCAATCAACTCCAGCAGCATCGATTGATATGTTGCCACCAGCTGCCTATTCAGATAATCCATC
TACAAGCTTTGCCGCTAAATTTGTCCATACATCAATCAACAAAAATCGTTGTTCCATCAATAGAGTGTTGTGGACTCCTACAGGGAGACGTCTGATTACAGGCTC
ACAAAGTGGTGAATTTACCCTTTGGAATGGACAGTCGTTCAATTTTGAAATGATTCTTCAGGCTCATGATCAAGCAATTAGGTCTATGGTATGGAGTCACAATGA
CAACTGGATGGTCTCTGGTGATGATGGGGGCTCAATAAAGTATTGGCAAAATAACATGAATAATGTGAAGGCGAATAAATCAGCTCATAAAGAATCAGTTCGGGA
CTTGAGGTAG
Protein sequenceShow/hide protein sequence
MYGDPQQFQQQQHQQQQPNQHPLGGDFPRGPPPSGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPPPPYEAHGDSFGAKRMRKLTQRRAVDYTSTVVRYMQIRMW
QRDSKDRTVLQSTPAASIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMV
SGDDGGSIKYWQNNMNNVKANKSAHKESVRDLR