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CmoCh15G008740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G008740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr15:4434225..4434575
RNA-Seq ExpressionCmoCh15G008740
SyntenyCmoCh15G008740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050243.1 hypothetical protein E6C27_scaffold355G00870 [Cucumis melo var. makuwa]3.5e-2384Show/hide
Query:  GSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGLYHSSILGKA
        GSA G V+FH L SS IDAFVISI FAFSGALSALLVPQRHNLA FCA+YSL SMASALLLLIWGLYH+ ILGKA
Subjt:  GSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGLYHSSILGKA

KAG6579131.1 hypothetical protein SDJN03_23579, partial [Cucurbita argyrosperma subsp. sororia]8.0e-5298.28Show/hide
Query:  MRLSDQFAVTKLSTFTPPTVILQSILFLSWNSLTILVLFAGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALL
        MRLSDQFAVTKLSTFTPPTVILQSILFLSWNSLTILVLFAGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALL
Subjt:  MRLSDQFAVTKLSTFTPPTVILQSILFLSWNSLTILVLFAGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALL

Query:  LLIWGLYHSSILGKAR
        LLIWGLYHS +LGKAR
Subjt:  LLIWGLYHSSILGKAR

KAG6601931.1 hypothetical protein SDJN03_07164, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1857.41Show/hide
Query:  STFTPP-TVILQSILFLSWNSLTILVLFAGSAAG---NVIFHDL--PSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGL
        + F PP T++L+ IL+LS N+L+IL++ +G + G    +IF  L  PSS  DAFV+SI FAF GAL ALL+P + NLATF  LYS+ASMASALLLLIWGL
Subjt:  STFTPP-TVILQSILFLSWNSLTILVLFAGSAAG---NVIFHDL--PSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGL

Query:  YHSSILGK
        Y+S + G+
Subjt:  YHSSILGK

KGN49807.1 hypothetical protein Csa_004664 [Cucumis sativus]4.9e-0951.58Show/hide
Query:  TVILQSILFLSWNSLTILVLFAGSA---AGNVIFHDL--PSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGLYH
        T +L SILF+S+N+LTIL+  +  +      VIF+ L  PS   DAFV+SI F+FS AL ALL+P +  LA + A YS+A MA AL LLI GLY+
Subjt:  TVILQSILFLSWNSLTILVLFAGSA---AGNVIFHDL--PSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGLYH

KGN49809.1 hypothetical protein Csa_004648 [Cucumis sativus]2.5e-3778.63Show/hide
Query:  MRLSDQFAVTKLST-FTPPTVILQSILFLSWNSLTILVLFAGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASAL
        M+LS+Q A+ KL T FT PT+IL+SILFLS NSLTIL+LFAGSA G VIFH  PSS IDAF+ISI FAFSGALSALLVPQRH LA FCALYSLAS+ASAL
Subjt:  MRLSDQFAVTKLST-FTPPTVILQSILFLSWNSLTILVLFAGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASAL

Query:  LLLIWGLYHSSILGKAR
        LLLIWGLYH+ ILGKA+
Subjt:  LLLIWGLYHSSILGKAR

TrEMBL top hitse value%identityAlignment
A0A061E956 Uncharacterized protein9.1e-0946Show/hide
Query:  LSTFTPPTVILQSILFLSWNSLTILVLF-----AGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGL
        LS+    T IL+SILF+S+   TIL+L       GS    ++F   P +T  AF I I FAFSGA  AL+ P    +A+ C  YS+ASMASA+ LLIW +
Subjt:  LSTFTPPTVILQSILFLSWNSLTILVLF-----AGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGL

A0A0A0KLQ9 Uncharacterized protein1.2e-3778.63Show/hide
Query:  MRLSDQFAVTKLST-FTPPTVILQSILFLSWNSLTILVLFAGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASAL
        M+LS+Q A+ KL T FT PT+IL+SILFLS NSLTIL+LFAGSA G VIFH  PSS IDAF+ISI FAFSGALSALLVPQRH LA FCALYSLAS+ASAL
Subjt:  MRLSDQFAVTKLST-FTPPTVILQSILFLSWNSLTILVLFAGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASAL

Query:  LLLIWGLYHSSILGKAR
        LLLIWGLYH+ ILGKA+
Subjt:  LLLIWGLYHSSILGKAR

A0A0A0KN11 Uncharacterized protein2.4e-0951.58Show/hide
Query:  TVILQSILFLSWNSLTILVLFAGSA---AGNVIFHDL--PSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGLYH
        T +L SILF+S+N+LTIL+  +  +      VIF+ L  PS   DAFV+SI F+FS AL ALL+P +  LA + A YS+A MA AL LLI GLY+
Subjt:  TVILQSILFLSWNSLTILVLFAGSA---AGNVIFHDL--PSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGLYH

A0A5A7U2V8 Uncharacterized protein1.7e-2384Show/hide
Query:  GSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGLYHSSILGKA
        GSA G V+FH L SS IDAFVISI FAFSGALSALLVPQRHNLA FCA+YSL SMASALLLLIWGLYH+ ILGKA
Subjt:  GSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGLYHSSILGKA

A0A5B7B2W8 Uncharacterized protein (Fragment)6.5e-0747.25Show/hide
Query:  VILQSILFLSWNSLTILVLFA-----GSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSAL-LVPQRHNLATFCALYSLASMASALLLLIW
        +IL+SILF S+ +  IL+        G+    +IF  LPS+   AF+I I FAFSGA   L ++P +  LATFC   S+ASMASA+ LLIW
Subjt:  VILQSILFLSWNSLTILVLFA-----GSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSAL-LVPQRHNLATFCALYSLASMASALLLLIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTATCAGACCAATTTGCAGTGACCAAACTCTCCACTTTCACACCTCCAACAGTAATCTTACAATCAATTTTGTTTTTGTCTTGGAACAGTCTCACAATC
CTTGTGTTATTTGCAGGCAGTGCAGCGGGGAATGTGATCTTCCATGATCTTCCCTCCTCTACCATTGATGCCTTTGTTATCTCAATTTTCTTTGCCTTTTCAGGT
GCTTTGAGTGCTCTTTTGGTCCCTCAAAGGCACAACTTAGCTACATTTTGTGCCTTGTATTCTCTGGCTTCCATGGCTTCTGCTCTGCTTCTGCTGATTTGGGGA
TTGTATCACTCATCCATTCTCGGCAAAGCTCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATTATCAGACCAATTTGCAGTGACCAAACTCTCCACTTTCACACCTCCAACAGTAATCTTACAATCAATTTTGTTTTTGTCTTGGAACAGTCTCACAATC
CTTGTGTTATTTGCAGGCAGTGCAGCGGGGAATGTGATCTTCCATGATCTTCCCTCCTCTACCATTGATGCCTTTGTTATCTCAATTTTCTTTGCCTTTTCAGGT
GCTTTGAGTGCTCTTTTGGTCCCTCAAAGGCACAACTTAGCTACATTTTGTGCCTTGTATTCTCTGGCTTCCATGGCTTCTGCTCTGCTTCTGCTGATTTGGGGA
TTGTATCACTCATCCATTCTCGGCAAAGCTCGCTAG
Protein sequenceShow/hide protein sequence
MRLSDQFAVTKLSTFTPPTVILQSILFLSWNSLTILVLFAGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWG
LYHSSILGKAR