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CmoCh15G008800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G008800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationCmo_Chr15:4450537..4451167
RNA-Seq ExpressionCmoCh15G008800
SyntenyCmoCh15G008800
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]2.6e-3162.02Show/hide
Query:  DGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTIT
        + LP    M R P P +SS+T NN+GK + GLTFQAVLALFI+ P S PPLL H+FAAA+LISFA+S A +FLQ  +PRIAL   KIGAL+AAIG C + 
Subjt:  DGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTIT

Query:  SVLLKHQHFSWIPWLACGFALMAFILSFK
        S+L+ HQ+F+WI WLA GF+LMAF+LSF+
Subjt:  SVLLKHQHFSWIPWLACGFALMAFILSFK

KAG6579136.1 hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5178.15Show/hide
Query:  MGSTPQHVSIDMNQFCPIQGASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYP
        MGSTPQHVSIDMNQF  IQGASDGL       R P      Q RNNLGKIVFGLTFQAVLALFIS PTS PPLL+++FAAAMLIS ALSLAALFLQ A+P
Subjt:  MGSTPQHVSIDMNQFCPIQGASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYP

Query:  RIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK
        RIALS GKIGA+LAA+GAC + S+LLKHQ+FSWIPWLACGFALMAFILSFK
Subjt:  RIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK

KAG6579137.1 hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]1.2e-76100Show/hide
Query:  MGSTPQHVSIDMNQFCPIQGASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYP
        MGSTPQHVSIDMNQFCPIQGASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYP
Subjt:  MGSTPQHVSIDMNQFCPIQGASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYP

Query:  RIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK
        RIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK
Subjt:  RIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK

KAG6579139.1 hypothetical protein SDJN03_23587, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4974.17Show/hide
Query:  MGSTPQHVSIDMNQFCPIQGASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYP
        MGSTPQHVSI+MNQF   QGASDGL       R P      Q RNNLGKIVFGLTFQAVLALFIS PTS PPL +++FAAA+LIS ALSLAALFLQ A+P
Subjt:  MGSTPQHVSIDMNQFCPIQGASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYP

Query:  RIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK
        RIALS GKIGA+LAA+GAC + S+LLKHQ+FSWIPWLACGFA MAF+LSFK
Subjt:  RIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]1.2e-3153.5Show/hide
Query:  MGSTPQHVSIDMNQ-FCPIQGASDGLPPTTAMP-----RPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALF
        M S+ Q +SIDMN  +  I   ++  P    +P     +   P +SS+T NN+G  + GLTFQAVLALFI+  TS PPLL H+F AA+LISFA+S   +F
Subjt:  MGSTPQHVSIDMNQ-FCPIQGASDGLPPTTAMP-----RPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALF

Query:  LQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK
        LQ  +PRIAL   KIGAL+AAIG C + S+L+ HQ+F+WI WLACGF+LMAF+LSF+
Subjt:  LQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein5.6e-3253.5Show/hide
Query:  MGSTPQHVSIDMNQ-FCPIQGASDGLPPTTAMP-----RPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALF
        M S+ Q +SIDMN  +  I   ++  P    +P     +   P +SS+T NN+G  + GLTFQAVLALFI+  TS PPLL H+F AA+LISFA+S   +F
Subjt:  MGSTPQHVSIDMNQ-FCPIQGASDGLPPTTAMP-----RPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALF

Query:  LQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK
        LQ  +PRIAL   KIGAL+AAIG C + S+L+ HQ+F+WI WLACGF+LMAF+LSF+
Subjt:  LQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK

A0A0A0KJP2 Uncharacterized protein1.3e-2549.7Show/hide
Query:  MGSTPQHVSIDMNQFC----PIQGASDGL----PPTTAMP-------RPPPPPDSSQTRNNLGKIVFGLTFQAVLALFI-SPPTSCPPLLMHIFAAAMLI
        M ST    S+DM+ F      I   + GL     P+  +P        P    DSSQ    LGKI+  L+FQAVLALFI SPPTS PPLL+H FAAA+ I
Subjt:  MGSTPQHVSIDMNQFC----PIQGASDGL----PPTTAMP-------RPPPPPDSSQTRNNLGKIVFGLTFQAVLALFI-SPPTSCPPLLMHIFAAAMLI

Query:  SFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK
        SFA+S AALFL  ++PR A    K+GAL +A G C I S LL HQ+F+WI W+AC F+++ F LSFK
Subjt:  SFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK

A0A0A0KQ03 Uncharacterized protein4.0e-1442.35Show/hide
Query:  MGSTPQH-VSIDMNQF----------------CPIQG-ASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFIS-PPTSCPPLLMHIFAAA
        M  TP H +S+DMN+                 C   G ASD LP    M R P P +S Q     G     LTFQA++ LF+S  P+S  PL   +FAA 
Subjt:  MGSTPQH-VSIDMNQF----------------CPIQG-ASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFIS-PPTSCPPLLMHIFAAA

Query:  MLISFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK
        ML SF  S   + LQ  +P+ A      GAL AAIG C I S+LL + +F+WI WLA G  L AFI+SFK
Subjt:  MLISFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.2e-3162.02Show/hide
Query:  DGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTIT
        + LP    M R P P +SS+T NN+GK + GLTFQAVLALFI+ P S PPLL H+FAAA+LISFA+S A +FLQ  +PRIAL   KIGAL+AAIG C + 
Subjt:  DGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTIT

Query:  SVLLKHQHFSWIPWLACGFALMAFILSFK
        S+L+ HQ+F+WI WLA GF+LMAF+LSF+
Subjt:  SVLLKHQHFSWIPWLACGFALMAFILSFK

A0A6J1CY58 uncharacterized protein LOC1110156582.6e-1347.58Show/hide
Query:  MGSTPQHVSIDMNQFCPIQGA--------------------SDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAA
        M STPQ  S+DMN       A                    SD LP    M RPPP    +++  +LGK + GLTFQAVLALFIS P+S P L   +F A
Subjt:  MGSTPQHVSIDMNQFCPIQGA--------------------SDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAA

Query:  AMLISFALSLAALFLQIAYPRIAL
        A+LISFA+S A LFLQ AYPR+AL
Subjt:  AMLISFALSLAALFLQIAYPRIAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGGTGTTGACCAAGAGTAGCTTGGGCAATGTTTATAAATTCTACGACGCCCGCAAAGACTCGATCATAAACCATTTGAGATATTCAGAGATTTCCTTT
CTCTGGTTCTCAATGGGATCAACACCACAGCATGTTTCCATCGACATGAATCAATTCTGTCCCATCCAGGGAGCCTCAGATGGCTTACCACCTACCACCGCCATG
CCCAGGCCGCCTCCGCCACCCGACAGCTCTCAGACTCGCAACAATCTTGGAAAGATAGTTTTCGGGCTTACTTTCCAGGCAGTTTTGGCTCTGTTCATCAGCCCA
CCCACCTCATGTCCTCCACTTTTGATGCATATCTTTGCGGCGGCTATGTTGATCAGCTTTGCACTTTCACTTGCTGCGCTTTTCCTTCAAATTGCATACCCAAGA
ATTGCGCTTTCCTCCGGCAAGATCGGTGCTCTGCTAGCTGCCATTGGTGCGTGCACCATTACTAGTGTTCTTCTTAAGCATCAGCATTTCAGTTGGATTCCTTGG
CTGGCATGCGGCTTCGCCTTGATGGCCTTCATTCTATCATTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGGTGTTGACCAAGAGTAGCTTGGGCAATGTTTATAAATTCTACGACGCCCGCAAAGACTCGATCATAAACCATTTGAGATATTCAGAGATTTCCTTT
CTCTGGTTCTCAATGGGATCAACACCACAGCATGTTTCCATCGACATGAATCAATTCTGTCCCATCCAGGGAGCCTCAGATGGCTTACCACCTACCACCGCCATG
CCCAGGCCGCCTCCGCCACCCGACAGCTCTCAGACTCGCAACAATCTTGGAAAGATAGTTTTCGGGCTTACTTTCCAGGCAGTTTTGGCTCTGTTCATCAGCCCA
CCCACCTCATGTCCTCCACTTTTGATGCATATCTTTGCGGCGGCTATGTTGATCAGCTTTGCACTTTCACTTGCTGCGCTTTTCCTTCAAATTGCATACCCAAGA
ATTGCGCTTTCCTCCGGCAAGATCGGTGCTCTGCTAGCTGCCATTGGTGCGTGCACCATTACTAGTGTTCTTCTTAAGCATCAGCATTTCAGTTGGATTCCTTGG
CTGGCATGCGGCTTCGCCTTGATGGCCTTCATTCTATCATTCAAGTGA
Protein sequenceShow/hide protein sequence
MSAVLTKSSLGNVYKFYDARKDSIINHLRYSEISFLWFSMGSTPQHVSIDMNQFCPIQGASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVLALFISP
PTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRIALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK