; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G009090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G009090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGlutamate decarboxylase
Genome locationCmo_Chr15:4596587..4598160
RNA-Seq ExpressionCmoCh15G009090
SyntenyCmoCh15G009090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CNV68992.1 Uncharacterised protein [Mycobacterium tuberculosis]2.5e-0735.8Show/hide
Query:  EVKSEGRLMSSKIINMKNELLRQVLSSSPNDPPNPSIHKPILVPTHIDTLHQRKPEVPFQLWIQERRYEPTTSRIHMNRRI
        EV+ EGR +++++++ +N++LRQVL  +P+D P+  I +PILV   +D  H  +P++P+Q+ +Q+R ++  T R+ + R +
Subjt:  EVKSEGRLMSSKIINMKNELLRQVLSSSPNDPPNPSIHKPILVPTHIDTLHQRKPEVPFQLWIQERRYEPTTSRIHMNRRI
MCI60952.1 hypothetical protein [Trifolium medium]5.9e-0958.57Show/hide
Query:  ISTKSRSARAREKSSLTTTRRTDTCLAPLGIRYAGTIHPNRRNISDTSNSSWVLRSLRQNATTGTPMSFD
        +S+  RSA  RE S+L TTR T  C AP GI YAGT  P RRNI D  NSS+   S R+NATTGTP+SF+
Subjt:  ISTKSRSARAREKSSLTTTRRTDTCLAPLGIRYAGTIHPNRRNISDTSNSSWVLRSLRQNATTGTPMSFD
TXG57022.1 hypothetical protein EZV62_018335 [Acer yangbiense]6.1e-0661.82Show/hide
Query:  ARAREKSSLTTTRRTDTCLAPLGIRYAGTIHPNRRNISDTSNSSWVLRSLRQNAT
        ++   K SL TTR T TC A   I YAGTIHP RR+IS TSN SW L SLR+NAT
Subjt:  ARAREKSSLTTTRRTDTCLAPLGIRYAGTIHPNRRNISDTSNSSWVLRSLRQNAT
TrEMBL top hitse value%identityAlignment
A0A0A9KAZ5 Glutamate decarboxylase4.3e-0554.72Show/hide
Query:  EVKSEGRLMSSKIINMKNELLRQVLSSSPNDPPNPSIHKPILVPTHIDTLHQR
        EV+ E RL+  +I+ M+NE  RQ+L + P DP N SI K I VPT ID LHQR
Subjt:  EVKSEGRLMSSKIINMKNELLRQVLSSSPNDPPNPSIHKPILVPTHIDTLHQR
A0A392TJ15 Uncharacterized protein (Fragment)2.9e-0958.57Show/hide
Query:  ISTKSRSARAREKSSLTTTRRTDTCLAPLGIRYAGTIHPNRRNISDTSNSSWVLRSLRQNATTGTPMSFD
        +S+  RSA  RE S+L TTR T  C AP GI YAGT  P RRNI D  NSS+   S R+NATTGTP+SF+
Subjt:  ISTKSRSARAREKSSLTTTRRTDTCLAPLGIRYAGTIHPNRRNISDTSNSSWVLRSLRQNATTGTPMSFD
A0A5C7HL19 Uncharacterized protein3.0e-0661.82Show/hide
Query:  ARAREKSSLTTTRRTDTCLAPLGIRYAGTIHPNRRNISDTSNSSWVLRSLRQNAT
        ++   K SL TTR T TC A   I YAGTIHP RR+IS TSN SW L SLR+NAT
Subjt:  ARAREKSSLTTTRRTDTCLAPLGIRYAGTIHPNRRNISDTSNSSWVLRSLRQNAT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCCAAGCATTCACAATTTCCATTTCTGTCTCCTCTGCCGTCTTCTTCACTGCGCTATCATTCGCTGCATCCTCGTCCTTCGCCAAGGCGATGGCTTTCGCAGC
ACTTTTGGGTGGAAGAGTATCAAGCTCCGCCAACACCTTAATGATATCAACCAAAAGCCGCTCTGCAAGGGCGCGGGAGAAATCTTCTCTAACCACAACACGAAGAACGG
ATACATGCTTGGCTCCCTTAGGCATTCGATACGCGGGCACAATCCACCCGAACCGCCGCAACATCTCCGACACCTCAAACTCGTCGTGGGTACTTCGGTCTTTGAGGCAA
AATGCCACCACTGGCACGCCGATGTCCTTTGACACTATTGTGAATCGCCCCGTAGAAGTTAAGAGTGAAGGTAGACTGATGAGCTCCAAGATAATCAATATGAAAAATGA
GTTGTTGAGGCAAGTCTTGTCTAGTTCTCCAAATGACCCACCCAATCCCAGCATACACAAGCCCATACTTGTGCCCACTCACATTGATACTCTTCACCAAAGGAAGCCGG
AAGTCCCATTCCAGCTCTGGATACAAGAACGGCGCTATGAACCCACCACTAGCCGCATCCACATGAATAGGCGTATCCCATCCACTTTCCTTATTCTTCTTCATCAACAA
ATCATTCAACACCTTCACATCTTCAAATTCCCCATTGTAAGTGGAACCAAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATCCAAGCATTCACAATTTCCATTTCTGTCTCCTCTGCCGTCTTCTTCACTGCGCTATCATTCGCTGCATCCTCGTCCTTCGCCAAGGCGATGGCTTTCGCAGC
ACTTTTGGGTGGAAGAGTATCAAGCTCCGCCAACACCTTAATGATATCAACCAAAAGCCGCTCTGCAAGGGCGCGGGAGAAATCTTCTCTAACCACAACACGAAGAACGG
ATACATGCTTGGCTCCCTTAGGCATTCGATACGCGGGCACAATCCACCCGAACCGCCGCAACATCTCCGACACCTCAAACTCGTCGTGGGTACTTCGGTCTTTGAGGCAA
AATGCCACCACTGGCACGCCGATGTCCTTTGACACTATTGTGAATCGCCCCGTAGAAGTTAAGAGTGAAGGTAGACTGATGAGCTCCAAGATAATCAATATGAAAAATGA
GTTGTTGAGGCAAGTCTTGTCTAGTTCTCCAAATGACCCACCCAATCCCAGCATACACAAGCCCATACTTGTGCCCACTCACATTGATACTCTTCACCAAAGGAAGCCGG
AAGTCCCATTCCAGCTCTGGATACAAGAACGGCGCTATGAACCCACCACTAGCCGCATCCACATGAATAGGCGTATCCCATCCACTTTCCTTATTCTTCTTCATCAACAA
ATCATTCAACACCTTCACATCTTCAAATTCCCCATTGTAAGTGGAACCAAAAATTGA
Protein sequenceShow/hide protein sequence
MSIQAFTISISVSSAVFFTALSFAASSSFAKAMAFAALLGGRVSSSANTLMISTKSRSARAREKSSLTTTRRTDTCLAPLGIRYAGTIHPNRRNISDTSNSSWVLRSLRQ
NATTGTPMSFDTIVNRPVEVKSEGRLMSSKIINMKNELLRQVLSSSPNDPPNPSIHKPILVPTHIDTLHQRKPEVPFQLWIQERRYEPTTSRIHMNRRIPSTFLILLHQQ
IIQHLHIFKFPIVSGTKN