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CmoCh15G009400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G009400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionconserved peptide upstream open reading frame 53
Genome locationCmo_Chr15:4814418..4815186
RNA-Seq ExpressionCmoCh15G009400
SyntenyCmoCh15G009400
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2664121.1 hypothetical protein I3760_16G064500 [Carya illinoinensis]2.2e-1969.32Show/hide
Query:  MSAGFDLAVIGALLQL-CFSSSSSSLLLS---CCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
        MSAGFDL +IGALL+L  FS+++ S L +   CCM+LC F+Q LNLV+ SVSMR RPKRTCSGVKCFGAFHIKRF F L LF RGG T
Subjt:  MSAGFDLAVIGALLQL-CFSSSSSSLLLS---CCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
KAG6579195.1 hypothetical protein SDJN03_23643, partial [Cucurbita argyrosperma subsp. sororia]7.6e-3698.82Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRF-SFILLLFRRGGFT
        MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRF SFILLLFRRGGFT
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRF-SFILLLFRRGGFT
KAG6672509.1 hypothetical protein I3842_16G060900 [Carya illinoinensis]5.0e-1969.32Show/hide
Query:  MSAGFDLAVIGALLQL-CFSSSSSSLLLS---CCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
        MSAGFDL +IGALL+L  FS ++ S L +   CCM+LC F+Q LNLV+ SVSMR RPKRTCSGVKCFGAFHIKRF F L LF RGG T
Subjt:  MSAGFDLAVIGALLQL-CFSSSSSSLLLS---CCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
KGN45959.1 hypothetical protein Csa_005610 [Cucumis sativus]3.0e-2482.14Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
        MSAGFDLAVIGALLQLCF    SSLLL    IL  FKQSLNL+F SVSMR RPKRTCSGVKCFGAFHIKRFSF+LLLFR+GGFT
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
OAY31310.1 hypothetical protein MANES_14G101800v8 [Manihot esculenta]2.2e-1965.17Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCC-----MILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
        MSA FDLA+IGALL+LCF  S+SS L  CC     M+LCCF+QSL+L FP++SMR R KRTCSGV+CFG FHIKRF F L L+ RG  T
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCC-----MILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
TrEMBL top hitse value%identityAlignment
A0A0A0KAV1 Uncharacterized protein1.5e-2482.14Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
        MSAGFDLAVIGALLQLCF    SSLLL    IL  FKQSLNL+F SVSMR RPKRTCSGVKCFGAFHIKRFSF+LLLFR+GGFT
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
A0A0D2W3V4 Uncharacterized protein2.3e-1762.07Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
        MS  FDLA+IGA LQLCFSSS+   S L +   + LC ++Q LNLV P VSMR RPK+TCSGV CFG FHIK+  F LLLF RG +T
Subjt:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
A0A2C9UKK3 Uncharacterized protein1.1e-1965.17Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCC-----MILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
        MSA FDLA+IGALL+LCF  S+SS L  CC     M+LCCF+QSL+L FP++SMR R KRTCSGV+CFG FHIKRF F L L+ RG  T
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCC-----MILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
A0A7J8T161 Uncharacterized protein4.5e-1863.22Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
        MS  FDLA+IGA LQLCFSSS+   S L +   + LC ++Q LNLV PSVSMR RPK+TCSGV CFG FHIK+  F LLLF RG +T
Subjt:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
A0A7J8VXR7 Uncharacterized protein4.5e-1863.22Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
        MS  FDLA+IGA LQLCFSSS+   S L +   + LC ++Q LNLV PSVSMR RPK+TCSGV CFG FHIK+  F LLLF RG +T
Subjt:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25472.1 conserved peptide upstream open reading frame 542.5e-0546.34Show/hide
Query:  MSAGFDLAVIGALLQLCF-----SSSSSSLL---LSCCMIL----CCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKR
        MSA  + A I +L  + F     SSSSSS+L   LS   +L     C +Q L L  PS+SM  R KRTCSGV+ FG FH K+
Subjt:  MSAGFDLAVIGALLQLCF-----SSSSSSLL---LSCCMIL----CCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKR
AT1G68552.1 conserved peptide upstream open reading frame 536.9e-1151.16Show/hide
Query:  MSAGFDLAVIGALLQL-----CFSSSSSSLLLSC---CMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIK--RFSFILL
        MSAGF+  VI +L+ +       SS SSS L SC    +  CC KQ L L  PS+SMR RPKRTCS V+ FG FHIK  +FSF ++
Subjt:  MSAGFDLAVIGALLQL-----CFSSSSSSLLLSC---CMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIK--RFSFILL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCTGT
TTCAAGCAGAGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAACGA
TTCTCCTTCATTCTCTTGCTCTTCAGAAGAGGGGGTTTCACATAA
mRNA sequenceShow/hide mRNA sequence
TTTTTATATACCCAATTCTCGCCTTCTTCCTCTGTTGTCTGTGAATGGAGATTTAGGGAAATTTAGGGTTTGAAAGGCTTCTTCTGTCTGTTTCTCTTGCTCTGC
AACTTGAGCGCCTTTCTGAGCTTCATTTCGCTGTTTTCCTGCACACGCCGTAGGCATACATTGATAAGTTTAACGCTTCCTTTGTCACGTTTTAAGCAAAGCCCA
ACCATAGCCATTGATTTCTCATCCTATCTCTTCAATCCTTCCCTTTTCTGTACTCCCTTCCCTTTTATTTATTATCTTCGTTTTGCTTATTCTTCCGCTGTTTCA
AAGGCAGACGGAGGGAGGGCTTCTTTTTTCCTGTTTTGTTTTCTGATTTTCTCTGAGGTTTGAGGAAGAGGAAGGCAGAGTTCTAGGAGTTGAGGAGCTGCAGAT
TTATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCT
GTTTCAAGCAGAGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAAC
GATTCTCCTTCATTCTCTTGCTCTTCAGAAGAGGGGGTTTCACATAA
Protein sequenceShow/hide protein sequence
MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT