; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G010180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G010180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box protein SKIP28
Genome locationCmo_Chr15:5957913..5959752
RNA-Seq ExpressionCmoCh15G010180
SyntenyCmoCh15G010180
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579265.1 F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. sororia]5.7e-17797.48Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSEN KFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAV HDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS-QQQQQQQQRRLYHHEHIEASK
        NCFKISDSALH+VVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS QQQQQQQQRRLYHHEHIEASK
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS-QQQQQQQQRRLYHHEHIEASK

Query:  LLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN
        LLRN+YVAMIDVEMCPKC+EIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN
Subjt:  LLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN

Query:  VGSSSAAGFVCEVCIET
        V SS+AAGFVCEVCIET
Subjt:  VGSSSAAGFVCEVCIET

KAG7016781.1 F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-16693.69Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSEN KFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAV HDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQR-RLYHHEHIEASK
        NCFKISDSALH+VVENNPLLTK            GVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNR QQQQQQQQ+ RLYHHEHIEASK
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQR-RLYHHEHIEASK

Query:  LLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN
        LLRN+YVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN
Subjt:  LLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN

Query:  VGSSSAAGFVCEVCIET
        V SSSAAGFVCEVCIET
Subjt:  VGSSSAAGFVCEVCIET

XP_022939676.1 F-box protein SKIP28 [Cucurbita moschata]3.5e-182100Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKL
        NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKL
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKL

Query:  LRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNV
        LRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNV
Subjt:  LRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNV

Query:  GSSSAAGFVCEVCIET
        GSSSAAGFVCEVCIET
Subjt:  GSSSAAGFVCEVCIET

XP_022973574.1 F-box protein SKIP28 [Cucurbita maxima]2.2e-16894.03Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSEN KFPNQVAVCGSSSPGV IAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAV HDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS--QQQQQQQQRRLYHHEHIEAS
        NCFKISDSALHEVV+NNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKY+LLKNRS  QQQQQQQQRRLYH + IEAS
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS--QQQQQQQQRRLYHHEHIEAS

Query:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ
        KLLRN+ VAMIDVEMCPKCQE+GRVYDCSRERCKIKQEQK GAECRGCSGCVPRCEECGGCVDGDETEEAVC G+LCTSCWLQLPKCNHCN+PYCTRH Q
Subjt:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ

Query:  NVGSSSAAGFVCEVCIET
        NV SSSAAGFVCEVCIET
Subjt:  NVGSSSAAGFVCEVCIET

XP_023551551.1 F-box protein SKIP28-like [Cucurbita pepo subsp. pepo]1.5e-16993.99Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSEN KFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFE+LSMGAVCVSLRDAV HDVLPWLHL VDRPLSSRLNDYIL RIARKADGRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKL
        NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKN SQQQQQQQQ+R  +H++IEA KL
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKL

Query:  LRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNV
        LRN+Y+AMIDVEMCPKCQEIG+VYDCSRERCKIKQEQ SGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRH QNV
Subjt:  LRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNV

Query:  GSSSAAGFVCEVCIET
         SSSAAGFVCEVCIET
Subjt:  GSSSAAGFVCEVCIET

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein2.5e-12571.7Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSEN + PN  +V           AGPPHEALF V++YLPLFELLS+ AVCVSLRDAV HDVLPWLH+VVD  LSSRL+DY LGRIARKA GRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS--QQQQQQQQRRLYHHEHIEAS
        NCFKISDS LHEVVENNPLLTKLYVPGCTSLTPEGV+RAV+TLSQ SHNL +LMIGGIYNIEN+HLEVL+ HLL+NRS  +QQ+ +Q   LY HEH++  
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS--QQQQQQQQRRLYHHEHIEAS

Query:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ
        +LL + ++ +IDV++CPKC +I  VYDCSRERCKIKQ +   A+CRGC  C+PRCEECGGCVD DE EEA+C+ ILC+SCW QLPKCNHCNRPYC RH  
Subjt:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ

Query:  NVGSSSAAGFVCEVCIET
        NV SSS AGFVCE+C+ET
Subjt:  NVGSSSAAGFVCEVCIET

A0A1S4E4Z1 F-box protein SKIP28 isoform X13.5e-11971.85Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSEN + PN  AV           AGPPHEALF V+SYL LFELLSM AVCVSLRDAV HDVLPWLH+VVD  LSSRL+DY LGRIARKA GRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYH--HEHIEAS
        +CFKISDS LHEVVENNPLLTKLYVPGCTSLTP GV+RAV+T SQHSHNL +LMIGGIYNIEN HLEVL+ HLL+NRS Q +QQ+ R+++H  HEH++  
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYH--HEHIEAS

Query:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ
         LL N ++ +IDV++CPKC +I  VYDCSRERCKIKQ +   A+CRGC  C+PRCEECGGCVD DE EEA+C GI+C+SCWLQLPKCNHCNRPYC RH  
Subjt:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ

Query:  NV
        N+
Subjt:  NV

A0A5A7TYB5 F-box protein SKIP28 isoform X15.0e-12672.33Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSEN + PN  AV           AGPPHEALF V+SYL LFELLSM AVCVSLRDAV HDVLPWLH+VVD  LSSRL+DY LGRIARKA GRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYH--HEHIEAS
        +CFKISDS LHEVVENNPLLTKLYVPGCTSLTP GV+RAV+T SQHSHNL +LMIGGIYNIEN HLEVL+ HLL+NRS Q +QQ+ R+++H  HEH++  
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYH--HEHIEAS

Query:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ
         LL N ++ +IDV++CPKC +I  VYDCSRERCKIKQ +   A+CRGC  C+PRCEECGGCVD DE EEA+C GI+C+SCWLQLPKCNHCNRPYC RH  
Subjt:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ

Query:  NVGSSSAAGFVCEVCIET
        NV SSS AGFVCE+C+ET
Subjt:  NVGSSSAAGFVCEVCIET

A0A6J1FGL5 F-box protein SKIP281.7e-182100Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKL
        NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKL
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKL

Query:  LRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNV
        LRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNV
Subjt:  LRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNV

Query:  GSSSAAGFVCEVCIET
        GSSSAAGFVCEVCIET
Subjt:  GSSSAAGFVCEVCIET

A0A6J1IEZ1 F-box protein SKIP281.1e-16894.03Show/hide
Query:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
        MSEN KFPNQVAVCGSSSPGV IAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAV HDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI
Subjt:  MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALI

Query:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS--QQQQQQQQRRLYHHEHIEAS
        NCFKISDSALHEVV+NNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKY+LLKNRS  QQQQQQQQRRLYH + IEAS
Subjt:  NCFKISDSALHEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS--QQQQQQQQRRLYHHEHIEAS

Query:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ
        KLLRN+ VAMIDVEMCPKCQE+GRVYDCSRERCKIKQEQK GAECRGCSGCVPRCEECGGCVDGDETEEAVC G+LCTSCWLQLPKCNHCN+PYCTRH Q
Subjt:  KLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQ

Query:  NVGSSSAAGFVCEVCIET
        NV SSSAAGFVCEVCIET
Subjt:  NVGSSSAAGFVCEVCIET

SwissProt top hitse value%identityAlignment
Q9LK24 F-box protein At3g272901.9e-2633.98Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHL-VVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  + + D  L  R+ D  L ++ R+A G +R L L  C  I+D  L +V+ +NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHL-VVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLY

Query:  VPGCTSLTPEGVIRAVETL-SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRV
        V GC  L+  G++  +  L S +   + SL+ GG      E  + L   LL   ++   Q++++R Y      +   L +  V   D+E+CP C++   V
Subjt:  VPGCTSLTPEGVIRAVETL-SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRV

Query:  YDCSRERCKIK-QEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSC
        +DC  + C +K Q   S + CR C  C+ RC ECG C++ D   +  C    C  C
Subjt:  YDCSRERCKIK-QEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSC

Q9LU91 F-box protein SKIP148.7e-3534.24Show/hide
Query:  HEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLYVPGC
        H A+   L +L   +LLS+  VC SL   V  D L W H+ + RPL+ ++ +  L  +  +A G ++ L +++C +I+D  L  VV  N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLYVPGC

Query:  TSLTPEGVIRAVETL-SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCS
        T +T +G++  +  L S     +  L + G++ +  +H + L   LL   ++ +Q  Q+ R YH         +       +D+EMCPKCQ    VYDC 
Subjt:  TSLTPEGVIRAVETL-SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCS

Query:  RERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPK
         E CK K  +K   ECR CS C+ RC  CG C+   E EE  C  +LC  C    PK
Subjt:  RERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPK

Q9ZU90 F-box protein SKIP281.4e-5641.22Show/hide
Query:  HEALFLVLSYL-PLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  LV++ PLSSRL D IL   + K+ G+L+TL L  C  +++  L  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLYVPG

Query:  CTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCS
        C+ LTPEG++  VE+LS+++H L +L I G+     +HL  L  +L                                   ID+E+CPKC E+  +  CS
Subjt:  CTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCS

Query:  RERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETE--EAVCAG--ILCTSCWLQLPKCNHCNRPYCTRHCQN------VGSSSAAGFVCEVC
        RE C  KQ      +CRGC  C+PRC EC  C+ G +TE  EA C    +LC  CWL LPKC  CN+PYCT H           ++S   F CE C
Subjt:  RERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETE--EAVCAG--ILCTSCWLQLPKCNHCNRPYCTRHCQN------VGSSSAAGFVCEVC

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein9.8e-5841.22Show/hide
Query:  HEALFLVLSYL-PLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  LV++ PLSSRL D IL   + K+ G+L+TL L  C  +++  L  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLYVPG

Query:  CTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCS
        C+ LTPEG++  VE+LS+++H L +L I G+     +HL  L  +L                                   ID+E+CPKC E+  +  CS
Subjt:  CTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCS

Query:  RERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETE--EAVCAG--ILCTSCWLQLPKCNHCNRPYCTRHCQN------VGSSSAAGFVCEVC
        RE C  KQ      +CRGC  C+PRC EC  C+ G +TE  EA C    +LC  CWL LPKC  CN+PYCT H           ++S   F CE C
Subjt:  RERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETE--EAVCAG--ILCTSCWLQLPKCNHCNRPYCTRHCQN------VGSSSAAGFVCEVC

AT3G26000.1 Ribonuclease inhibitor6.2e-3634.24Show/hide
Query:  HEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLYVPGC
        H A+   L +L   +LLS+  VC SL   V  D L W H+ + RPL+ ++ +  L  +  +A G ++ L +++C +I+D  L  VV  N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLYVPGC

Query:  TSLTPEGVIRAVETL-SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCS
        T +T +G++  +  L S     +  L + G++ +  +H + L   LL   ++ +Q  Q+ R YH         +       +D+EMCPKCQ    VYDC 
Subjt:  TSLTPEGVIRAVETL-SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCS

Query:  RERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPK
         E CK K  +K   ECR CS C+ RC  CG C+   E EE  C  +LC  C    PK
Subjt:  RERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPK

AT3G27290.1 RNI-like superfamily protein1.4e-2733.98Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHL-VVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  + + D  L  R+ D  L ++ R+A G +R L L  C  I+D  L +V+ +NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHL-VVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLLTKLY

Query:  VPGCTSLTPEGVIRAVETL-SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRV
        V GC  L+  G++  +  L S +   + SL+ GG      E  + L   LL   ++   Q++++R Y      +   L +  V   D+E+CP C++   V
Subjt:  VPGCTSLTPEGVIRAVETL-SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRV

Query:  YDCSRERCKIK-QEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSC
        +DC  + C +K Q   S + CR C  C+ RC ECG C++ D   +  C    C  C
Subjt:  YDCSRERCKIK-QEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGAACAATAAATTCCCAAATCAGGTGGCCGTCTGCGGCAGTTCCTCTCCCGGCGTTCGAATCGCGGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAG
TTATCTTCCTCTATTTGAGCTTCTTTCCATGGGCGCAGTCTGCGTATCGCTAAGAGACGCAGTGGCACACGATGTGTTGCCATGGCTTCATCTCGTCGTCGATCGGCCCT
TGAGCTCCCGGCTAAACGATTACATTCTGGGGCGAATTGCCCGAAAGGCCGATGGCCGCCTTCGAACCTTGGCTTTGATCAACTGCTTCAAGATTTCAGATTCTGCACTT
CACGAAGTCGTTGAGAACAATCCCCTTCTCACCAAGCTTTATGTACCTGGTTGCACGAGTTTGACTCCTGAGGGAGTGATTCGGGCAGTGGAGACTCTATCACAACATTC
TCACAATTTGAATAGCCTAATGATTGGTGGCATTTACAACATAGAGAATGAACACCTTGAAGTCCTCAAGTACCATCTTCTCAAAAACCGATCGCAGCAGCAACAGCAAC
AGCAACAACGTCGTCTGTACCACCACGAGCACATTGAGGCATCAAAGTTGTTGAGGAACAAATACGTGGCAATGATTGATGTAGAAATGTGCCCAAAATGCCAGGAGATA
GGGAGAGTTTATGACTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGCAGAAATCTGGGGCAGAGTGCCGAGGTTGCAGTGGCTGCGTGCCAAGGTGCGAAGAATGTGG
GGGATGCGTAGATGGTGATGAAACAGAGGAGGCTGTATGTGCGGGTATCTTGTGCACAAGTTGTTGGCTTCAGCTTCCCAAATGCAACCATTGTAATAGGCCATATTGCA
CGCGACACTGTCAGAATGTTGGAAGTAGCTCTGCTGCTGGGTTTGTTTGTGAAGTTTGCATTGAAACTTAG
mRNA sequenceShow/hide mRNA sequence
TCATTGACGTTCTGAGATAAGCAGACCAGAATCTTCCTCGCCCTTCATTCGAAGCTAAGAAATTGGGTATTTCACTGACATGTCTGAGAACAATAAATTCCCAAATCAGG
TGGCCGTCTGCGGCAGTTCCTCTCCCGGCGTTCGAATCGCGGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTATTTGAGCTTCTTTCCATG
GGCGCAGTCTGCGTATCGCTAAGAGACGCAGTGGCACACGATGTGTTGCCATGGCTTCATCTCGTCGTCGATCGGCCCTTGAGCTCCCGGCTAAACGATTACATTCTGGG
GCGAATTGCCCGAAAGGCCGATGGCCGCCTTCGAACCTTGGCTTTGATCAACTGCTTCAAGATTTCAGATTCTGCACTTCACGAAGTCGTTGAGAACAATCCCCTTCTCA
CCAAGCTTTATGTACCTGGTTGCACGAGTTTGACTCCTGAGGGAGTGATTCGGGCAGTGGAGACTCTATCACAACATTCTCACAATTTGAATAGCCTAATGATTGGTGGC
ATTTACAACATAGAGAATGAACACCTTGAAGTCCTCAAGTACCATCTTCTCAAAAACCGATCGCAGCAGCAACAGCAACAGCAACAACGTCGTCTGTACCACCACGAGCA
CATTGAGGCATCAAAGTTGTTGAGGAACAAATACGTGGCAATGATTGATGTAGAAATGTGCCCAAAATGCCAGGAGATAGGGAGAGTTTATGACTGCTCAAGGGAGAGAT
GCAAGATAAAGCAAGAGCAGAAATCTGGGGCAGAGTGCCGAGGTTGCAGTGGCTGCGTGCCAAGGTGCGAAGAATGTGGGGGATGCGTAGATGGTGATGAAACAGAGGAG
GCTGTATGTGCGGGTATCTTGTGCACAAGTTGTTGGCTTCAGCTTCCCAAATGCAACCATTGTAATAGGCCATATTGCACGCGACACTGTCAGAATGTTGGAAGTAGCTC
TGCTGCTGGGTTTGTTTGTGAAGTTTGCATTGAAACTTAGCATACTTAAATTGTGATCCAATATGTAGATGAGAGTAAAACAAATTATATGAAAATATGAAATACAAATA
TGGTTTAAACAAATTATATTAACATGTTGTAAAGATTAAAAAGGAAGGTGGAATCAAATGTGA
Protein sequenceShow/hide protein sequence
MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSAL
HEVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEI
GRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNVGSSSAAGFVCEVCIET