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CmoCh15G010310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G010310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 27
Genome locationCmo_Chr15:6245198..6245485
RNA-Seq ExpressionCmoCh15G010310
SyntenyCmoCh15G010310
Gene Ontology termsNA
InterPro domainsIPR040274 - CLAVATA3/ESR (CLE)-related protein 27/43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063931.1 putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]1.4e-1757.89Show/hide
Query:  MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        M   GAT P RRRR LS FF+++FFIWVV       A+A+ARP   ++ P+    G  GSKEK    YFNGRS GSR F+E KRTVPSCPDPLHN
Subjt:  MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

KAB1221059.1 CLAVATA3/ESR (CLE)-related protein 43 [Morella rubra]6.9e-0951.9Show/hide
Query:  IWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGS-----KEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN
        IWV  C +  QA A+ R  PGN + + +  G  GS     KE+LLR YFNGR+FG    + GF+E KR VPSCPDPLHN
Subjt:  IWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGS-----KEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN

KAG6579278.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4898.95Show/hide
Query:  MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        MSGGGATPPRRRRRFLSSFFL+IFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
Subjt:  MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

KAG6601785.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1958.7Show/hide
Query:  GATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQS-VSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        G   P R+RRFLS+  ++  FIWVVFCH        AR FP N  PE++ V GG GSKEKLLR YFN    G RGF++ KRTVPSCPDPLHN
Subjt:  GATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQS-VSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

KAG7016789.1 hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-4898.95Show/hide
Query:  MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        MSGGGATPPRRRRRFLSSFFL+IFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
Subjt:  MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

TrEMBL top hitse value%identityAlignment
A0A061E6F8 Clavata3/esr-related 43, putative1.0e-0545.78Show/hide
Query:  LVIFFIWV-VFCHHRHQATAVARPFPGNQKPEQSVSGGA---GSKEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN
        L+IFF+ + V C  R       R  PGN   + + S G      K  L + YFNGRSF      RGF+E KR VPSCPDPLHN
Subjt:  LVIFFIWV-VFCHHRHQATAVARPFPGNQKPEQSVSGGA---GSKEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN

A0A0A0KR66 Uncharacterized protein4.1e-0740.22Show/hide
Query:  SSFFLVIFFIWV----VFCHHRHQATAVARPFPGNQKP---EQSVSGGA--GSKEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN
        S+F ++I  +WV    V CH + +A+ +  P P    P   ++S+SG     +K  LL+ YFNGR+F       GF++ KR +PSCPDPLHN
Subjt:  SSFFLVIFFIWV----VFCHHRHQATAVARPFPGNQKP---EQSVSGGA--GSKEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN

A0A2N9G6I6 Uncharacterized protein7.7e-0645.78Show/hide
Query:  IFFIWVVFCHHRHQATAVARPFPGNQK----PEQSVSGGAGSKEKLLRTYFNGRSFG------SRGFQEKKRTVPSCPDPLHN
        +F IW+  C +  QA A+ R FPGN       E+S+     SKE+L   YF+GR+F         GF E KR VPSCPDPLHN
Subjt:  IFFIWVVFCHHRHQATAVARPFPGNQK----PEQSVSGGAGSKEKLLRTYFNGRSFG------SRGFQEKKRTVPSCPDPLHN

A0A5A7VDX3 Putative Clavata3/esr-related 436.7e-1857.89Show/hide
Query:  MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        M   GAT P RRRR LS FF+++FFIWVV       A+A+ARP   ++ P+    G  GSKEK    YFNGRS GSR F+E KRTVPSCPDPLHN
Subjt:  MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

A0A6A1W705 CLAVATA3/ESR (CLE)-related protein 433.3e-0951.9Show/hide
Query:  IWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGS-----KEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN
        IWV  C +  QA A+ R  PGN + + +  G  GS     KE+LLR YFNGR+FG    + GF+E KR VPSCPDPLHN
Subjt:  IWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGS-----KEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN

SwissProt top hitse value%identityAlignment
Q9LUA1 CLAVATA3/ESR (CLE)-related protein 275.3e-0430Show/hide
Query:  RRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNG------RSFGSRGFQEKKRTVPSCPDPLHN
        R    ++  +VI   +++     +      R FP      ++ + G   +E L++ YF         SF  +G  E KR VPSCPDPLHN
Subjt:  RRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNG------RSFGSRGFQEKKRTVPSCPDPLHN

Arabidopsis top hitse value%identityAlignment
AT3G25905.1 CLAVATA3/ESR-RELATED 273.8e-0530Show/hide
Query:  RRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNG------RSFGSRGFQEKKRTVPSCPDPLHN
        R    ++  +VI   +++     +      R FP      ++ + G   +E L++ YF         SF  +G  E KR VPSCPDPLHN
Subjt:  RRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNG------RSFGSRGFQEKKRTVPSCPDPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTAGTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGC
CACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTT
TCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTAGTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGC
CACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTT
TCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG
Protein sequenceShow/hide protein sequence
MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN