; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G010370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G010370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPhotosystem II CP43 reaction center protein
Genome locationCmo_Chr15:6496813..6504061
RNA-Seq ExpressionCmoCh15G010370
SyntenyCmoCh15G010370
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR000932 - Photosystem antenna protein-like
IPR036001 - Photosystem antenna protein-like superfamily
IPR044900 - Photosystem II CP43 reaction centre protein superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4274706.1 unnamed protein product [Prunus armeniaca]4.3e-15473.44Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-------------------------------------------------------------GVND
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                             GV D
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-------------------------------------------------------------GVND

Query:  TWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFSFIAC
        TWAPGGGDVRKITNLTLSPS++FGYLLKSPFGGEGWI+SVDDLEDI+G     GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL ALSVF FIAC
Subjt:  TWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFSFIAC

Query:  CFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPW
        CFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPW
Subjt:  CFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPW

Query:  QERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPLRRVRP
        QER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+  + P
Subjt:  QERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPLRRVRP

KYP37312.1 Photosystem II CP43 chlorophyll apoprotein [Cajanus cajan]3.9e-15574.8Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP------------------------------------------------------GVNDTWAPGGG
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                      G+ DTWAPGGG
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP------------------------------------------------------GVNDTWAPGGG

Query:  DVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFSFIACCFVWFNN
        DVRKITNLTLSPS+IFGYLLKSPFGGEGWI+SVDDLEDI+G     GSICI GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVF FIACCFVWFNN
Subjt:  DVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFSFIACCFVWFNN

Query:  TAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERHSVE
        TAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQER S E
Subjt:  TAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERHSVE

Query:  YMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPLRRVRP
        YMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+  + P
Subjt:  YMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPLRRVRP

YP_004563863.1 photosystem II CP43 chlorophyll apoprotein [Nelumbo lutea]1.4e-15270.37Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDI+G     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

YP_009307040.1 photosystem II 43 kDa protein (CP43) [Ludwigia octovalvis]1.1e-15270.62Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDIVG     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

YP_009493416.1 PsbC [Banisteriopsis caapi]1.1e-15270.62Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDIVG     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

TrEMBL top hitse value%identityAlignment
A0A151R498 Photosystem II CP43 chlorophyll apoprotein1.9e-15574.8Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP------------------------------------------------------GVNDTWAPGGG
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                      G+ DTWAPGGG
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP------------------------------------------------------GVNDTWAPGGG

Query:  DVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFSFIACCFVWFNN
        DVRKITNLTLSPS+IFGYLLKSPFGGEGWI+SVDDLEDI+G     GSICI GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVF FIACCFVWFNN
Subjt:  DVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFSFIACCFVWFNN

Query:  TAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERHSVE
        TAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQER S E
Subjt:  TAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERHSVE

Query:  YMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPLRRVRP
        YMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+  + P
Subjt:  YMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPLRRVRP

A0A2U8U5S0 Photosystem II CP43 reaction center protein5.1e-15370.62Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDIVG     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

A0A481X573 Photosystem II CP43 reaction center protein5.1e-15370.62Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDIVG     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

A0A4P8VQR4 Photosystem II CP43 reaction center protein5.1e-15370.62Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDIVG     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

A0A6J5UE46 Uncharacterized protein2.1e-15473.44Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-------------------------------------------------------------GVND
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                             GV D
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-------------------------------------------------------------GVND

Query:  TWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFSFIAC
        TWAPGGGDVRKITNLTLSPS++FGYLLKSPFGGEGWI+SVDDLEDI+G     GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL ALSVF FIAC
Subjt:  TWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFSFIAC

Query:  CFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPW
        CFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPW
Subjt:  CFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPW

Query:  QERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPLRRVRP
        QER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+  + P
Subjt:  QERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPLRRVRP

SwissProt top hitse value%identityAlignment
B1NWE6 Photosystem II CP43 reaction center protein1.8e-15570.37Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDI+G     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

B2XWK1 Photosystem II CP43 reaction center protein3.1e-15569.88Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         G+ DTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWI+SVDDLEDI+G     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

Q09G50 Photosystem II CP43 reaction center protein1.8e-15570.37Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDI+G     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

Q2QD93 Photosystem II CP43 reaction center protein3.1e-15570.37Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDIVG     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L AN+GSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

Q68S10 Photosystem II CP43 reaction center protein2.4e-15570.12Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWI+SVDDLEDI+G     GSICILGGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVF FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWLATSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP

Arabidopsis top hitse value%identityAlignment
ATCG00280.1 photosystem II reaction center protein C3.5e-15469.38Show/hide
Query:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------
        MNLFEV HFVPEKPMYEQGLI LP LATLGWGVGP                                                                 
Subjt:  MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGP-----------------------------------------------------------------

Query:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW
                         GV DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWI+SVDDLEDI+G     GSICI GGIWHILTKPFAWARRALVW
Subjt:  -----------------GVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVG-----GSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSL ALSV  FIACCFVWFNNTAYPS FY PT PEASQAQAFTFLVRDQ L ANVGSAQGPT LGKYLM SPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL
        EPLRGPNGLDLSRLKKDIQPWQER S EYMTHAP GSL+SVGGV TEINAVNYVSPRSWL+TSHFVLGFFLFV +     +ARAA AGFEKGIDRDFEP+
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQE-KARAAVAGFEKGIDRDFEPL

Query:  RRVRP
          + P
Subjt:  RRVRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTATTCGAAGTGGTTCATTTCGTACCTGAGAAGCCCATGTATGAACAAGGATTAATTTTCCTTCCCCCCCTAGCTACTCTAGGTTGGGGCGTAGGTCCTGGCGT
AAATGATACCTGGGCTCCGGGGGGAGGAGATGTAAGAAAAATTACCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTCAAATCTCCTTTTGGGGGAGAGG
GATGGATTCTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCGTTTGCATGGGCTCGCCGCGCA
CTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTAGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGG
CTTTTACAGGCCGACTAGACCCGAAGCTTCTCAAGCTCAAGCTTTTACATTTCTAGTTAGAGACCAATGTCTTATAGCTAACGTTGGATCCGCTCAAGGACCTACTTGTT
TAGGTAAATATCTAATGCATTCTCCGACCGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAAT
GGTTTGGACTTGAGTAGGCTGAAAAAAGATATACAACCTTGGCAAGAACGACATTCCGTGGAATATATGACCCATGCTCCTTTCGGTTCTTTAGACTCCGTGGGTGGTGT
AACTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTTGTCATTTATGGCATGCAGGAAAAGG
CTCGTGCAGCAGTCGCAGGATTTGAAAAGGGAATTGATCGTGATTTTGAACCTTTAAGAAGAGTCCGGCCTAGCCCTATTATAGGTCCTCAAAGCGGGGCAGGCAAAAAG
AGGAGTGGGCGAGGGGCTATTGCAAGCAAGCTGGAGCACCTTGGAGAGTCGGTCCCTCTCAATGTTGATTGCTTTCAAATTCAAATGGCTTTGGACTCGAAGAAGGGGAG
ATTGGGACACGGTGGTGAATGGATTCAGGGAGGAGGAGATGAAGAAGGAGAAGAAGGCGTTATTCACAATCTAGCAAGGAGTAGAGCCATGTTTAAGTGGATCGCCCCTG
CAAAGTCTTCTCAGGAAGCTTGGGAGGTATTGAAGAAAGCCTTTGAGGGTGTGGATAGAGTGAAGAAGATCCACTTGCAGTCTTTACGAGCAGATTTGAGGCCCTACAAC
AAGAAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCTATTCGAAGTGGTTCATTTCGTACCTGAGAAGCCCATGTATGAACAAGGATTAATTTTCCTTCCCCCCCTAGCTACTCTAGGTTGGGGCGTAGGTCCTGGCGT
AAATGATACCTGGGCTCCGGGGGGAGGAGATGTAAGAAAAATTACCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTCAAATCTCCTTTTGGGGGAGAGG
GATGGATTCTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCGTTTGCATGGGCTCGCCGCGCA
CTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTAGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGG
CTTTTACAGGCCGACTAGACCCGAAGCTTCTCAAGCTCAAGCTTTTACATTTCTAGTTAGAGACCAATGTCTTATAGCTAACGTTGGATCCGCTCAAGGACCTACTTGTT
TAGGTAAATATCTAATGCATTCTCCGACCGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAAT
GGTTTGGACTTGAGTAGGCTGAAAAAAGATATACAACCTTGGCAAGAACGACATTCCGTGGAATATATGACCCATGCTCCTTTCGGTTCTTTAGACTCCGTGGGTGGTGT
AACTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTTGTCATTTATGGCATGCAGGAAAAGG
CTCGTGCAGCAGTCGCAGGATTTGAAAAGGGAATTGATCGTGATTTTGAACCTTTAAGAAGAGTCCGGCCTAGCCCTATTATAGGTCCTCAAAGCGGGGCAGGCAAAAAG
AGGAGTGGGCGAGGGGCTATTGCAAGCAAGCTGGAGCACCTTGGAGAGTCGGTCCCTCTCAATGTTGATTGCTTTCAAATTCAAATGGCTTTGGACTCGAAGAAGGGGAG
ATTGGGACACGGTGGTGAATGGATTCAGGGAGGAGGAGATGAAGAAGGAGAAGAAGGCGTTATTCACAATCTAGCAAGGAGTAGAGCCATGTTTAAGTGGATCGCCCCTG
CAAAGTCTTCTCAGGAAGCTTGGGAGGTATTGAAGAAAGCCTTTGAGGGTGTGGATAGAGTGAAGAAGATCCACTTGCAGTCTTTACGAGCAGATTTGAGGCCCTACAAC
AAGAAG
Protein sequenceShow/hide protein sequence
MNLFEVVHFVPEKPMYEQGLIFLPPLATLGWGVGPGVNDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWILSVDDLEDIVGGSICILGGIWHILTKPFAWARRA
LVWSGEAYLSYSLGALSVFSFIACCFVWFNNTAYPSGFYRPTRPEASQAQAFTFLVRDQCLIANVGSAQGPTCLGKYLMHSPTGEVIFGGETMRFWDLRAPWLEPLRGPN
GLDLSRLKKDIQPWQERHSVEYMTHAPFGSLDSVGGVTTEINAVNYVSPRSWLATSHFVLGFFLFVIYGMQEKARAAVAGFEKGIDRDFEPLRRVRPSPIIGPQSGAGKK
RSGRGAIASKLEHLGESVPLNVDCFQIQMALDSKKGRLGHGGEWIQGGGDEEGEEGVIHNLARSRAMFKWIAPAKSSQEAWEVLKKAFEGVDRVKKIHLQSLRADLRPYN
KK