| GenBank top hits | e value | %identity | Alignment |
|---|
| AAX96193.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] | 1.1e-68 | 30.74 | Show/hide |
Query: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
G+L G P + + + NPA+ W DQQVL LLSS++ E+L V T+ E W +++M+S+ TRA R L +KK + S
Subjt: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
Query: YFRKIKGLATELAAAGS-ALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLM---------------------------------------
YF K+K L E+A AG + ++++I Y++ GLG Y V+++ + E +++ D+++ ++
Subjt: YFRKIKGLATELAAAGS-ALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLM---------------------------------------
Query: TRGGQQKNHGRRDRGRGRSQGYAPSCPVGDRRGPSARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLD
+RGG HGR + G GR +G P G R CQ+C K GHTA CW+R DE Y + A AA +SY +D NWY DTGATDH+T +LD
Subjt: TRGGQQKNHGRRDRGRGRSQGYAPSCPVGDRRGPSARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLD
Query: RLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSL
+L ++E+Y+GGEQ+ +GAG+ +Y+SRDV+FDEN+FPF N+S ++S ++ T L ++ N+ M TN L
Subjt: RLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSL
Query: DAEI--LVSTSASELPQQSSALLP--CESALVVPPMIEASAPPPADDIVQCPVESSAAGQPTTVATVVP-------------------------------
A++ +S A+E P + A+ P E PP+ + P P + P +S+ P VP
Subjt: DAEI--LVSTSASELPQQSSALLP--CESALVVPPMIEASAPPPADDIVQCPVESSAAGQPTTVATVVP-------------------------------
Query: ----------------------SNVDPASTTHPYG--TRLKHNIKKLKVCTDETVTYLVARSSAS-EPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLV
++V + P G TRL+ ++K KV TD T+ Y + +AS EPT+ + A++ W+ AM+ E+ AL KNKTWHLV
Subjt: ----------------------SNVDPASTTHPYG--TRLKHNIKKLKVCTDETVTYLVARSSAS-EPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLV
Query: PPRAGLNVIDCKWVFKLK
PP+ G N+I CKWV+K+K
Subjt: PPRAGLNVIDCKWVFKLK
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| KAG8084596.1 hypothetical protein GUJ93_ZPchr0010g7974 [Zizania palustris] | 1.1e-87 | 58.97 | Show/hide |
Query: MGYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAA
+G+LDG++ A +K + +ST AGA ++NPAY +WY DQQ+LSGLLSSM+EE+L DV ATT+KEAWD LQR F+SSTRA QIRVELAT KKRD SA
Subjt: MGYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAA
Query: NYFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMTRGGQQKNH-----------------GR---RDRGRGRS
+YF K++GLA +LA AG+ L+DD+++AYL AGL +YDPFVTSMTT T+DDVFAHL+ +Q H GR R RGRG
Subjt: NYFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMTRGGQQKNH-----------------GR---RDRGRGRS
Query: QGY-APS----CPV--GDRRGPSARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVRERYHGGE
+G+ APS P G RG + R +CQIC+K GHTA+RCW+RMDESYQ+E AP +A+TSSYKID NWY DTGATDHITSDLDRLA+RERY+GG+
Subjt: QGY-APS----CPV--GDRRGPSARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVRERYHGGE
Query: QVQVGNGAGYSS
QVQVGNGAG S+
Subjt: QVQVGNGAGYSS
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| XP_012700051.1 uncharacterized protein LOC105914032 [Setaria italica] | 2.6e-73 | 33.79 | Show/hide |
Query: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
G+LD T P K + E NP ++ W +DQQVLS LLS++S++IL A T+ EAW ++ +F+S TRA +R+ LAT+KK QS
Subjt: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
Query: YFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMTRGGQQKNHGRRDRGRGRSQGYAPSCPVGDRRGPSARLSC
YF K+KG E+ AG AL DD+++ Y+LAGLGP+++ VTS+TT+ E++++D++++ L+T + + L+
Subjt: YFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMTRGGQQKNHGRRDRGRGRSQGYAPSCPVGDRRGPSARLSC
Query: QICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVY
+C+K GH+A++CW+R DE Y E A AA++SY +D NWY+D+G+TDHITS+L +LA RE+Y+GG+Q+ NG SG VY
Subjt: QICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVY
Query: MSRDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHM-----LMSGPTNSLDAEILV-----------STSASELPQQSSALLPC-
+SRDV+FDE+VFPF+ PN+ ++ P + L S S +D M L + S+ +++L A++ P ++ PC
Subjt: MSRDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHM-----LMSGPTNSLDAEILV-----------STSASELPQQSSALLPC-
Query: ------ESALVVPPMIE--------------ASAPP--------PADDIVQCPVESSA--AGQPTTVA------------------------TVVPSNVD
L P E A PP P D SA A + T A T V ++
Subjt: ------ESALVVPPMIE--------------ASAPP--------PADDIVQCPVESSA--AGQPTTVA------------------------TVVPSNVD
Query: PASTTHPYGTRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
PA+ T TRL+ I+K K TD TV Y + +S EP+S A+ W QAM E++AL KN+TWHLVPP+ G NVI CKWV+K+K
Subjt: PASTTHPYGTRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
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| XP_012701436.1 uncharacterized protein LOC105914402 [Setaria italica] | 3.6e-75 | 34.56 | Show/hide |
Query: GYLDGTNAAPAKLVPSSTAAGAEL-VSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAA
GYL+G APA+ + A G + V NP Y W+ +DQ+VL +LSS+ +E+ VVAA T+ EAW ++ MFS+ TRA T +R+ LAT++K +Q+ A
Subjt: GYLDGTNAAPAKLVPSSTAAGAEL-VSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAA
Query: NYFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMT-------------------RGGQ---------------
YF K+KG A E+AAAG + D+D+ A++ GL +++P VTS+T ++E L++ ++++ L++ RGG+
Subjt: NYFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMT-------------------RGGQ---------------
Query: ---QKNHGRRDRGRGRSQGYAPSCPVGDRRGPSA----------RLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGAT
+ GR D GRG S+G +P+ G +RG A R CQ+C K GHTA++CWHR DESY E A +SY +D NWY+DTGAT
Subjt: ---QKNHGRRDRGRGRSQGYAPSCPVGDRRGPSA----------RLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGAT
Query: DHITSDLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKRAPPNSSPIMQSTH-NAPNLCTLHLSNSSTNLENDHM
DH+TS+L++L+ RERYHG +Q+ +GAG + L L ++ + + + VF NS+ +TH N + C +S+ +++
Subjt: DHITSDLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKRAPPNSSPIMQSTH-NAPNLCTLHLSNSSTNLENDHM
Query: LMSGPTNSLDAEILVSTSASELPQQSSALLPCESALVVP-PMIEASAPP------------------PADDIVQCPVESSAAGQPTTVATV-VPSN----
P S L S S Q++SA A +P P APP PA D P S A T VP
Subjt: LMSGPTNSLDAEILVSTSASELPQQSSALLPCESALVVP-PMIEASAPP------------------PADDIVQCPVESSAAGQPTTVATV-VPSN----
Query: --VDPASTTHP------YGTRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
VD +S P + TRL I+K K+ TD TV Y +++ EP + A+ + W+ AM+ E++AL +N+TWHLVPPR G+N+IDCKWV+K+K
Subjt: --VDPASTTHP------YGTRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
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| XP_022931693.1 uncharacterized protein LOC111437852 [Cucurbita moschata] | 1.8e-71 | 74.16 | Show/hide |
Query: MDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKR
MDES QDEP S P LAATSS KIDPNWYSDT ATDHITSDLDRLAVRERYHGG+QVQVGNGA GYKCLDT+SG V +SRDVIFDENVFPFKR
Subjt: MDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKR
Query: APPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQQSSALLPCESALVVPPMIEASAPPPADDIVQCPVESSAAGQ
AP NSSP + THNA +LCTLHL +SSTNL+NDH +S PTNSLDA+ LV TS S+LPQQSSA L C+SAL V PMI AS P PADDI QCPV S AAGQ
Subjt: APPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQQSSALLPCESALVVPPMIEASAPPPADDIVQCPVESSAAGQ
Query: PTTVATVVP
PT VA P
Subjt: PTTVATVVP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FGM0 Reverse transcriptase Ty1/copia-type domain-containing protein | 3.3e-74 | 35.64 | Show/hide |
Query: PAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAANYFRKIKGLA
P ++ +S+ + + NP + QW QDQ VLS L+SS+SE+++ VV TTS++ W TL+RMF++ ++A QI +L+T +K S +++F+ GLA
Subjt: PAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAANYFRKIKGLA
Query: TELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMT-------------------------------RGGQQKNHGRRDRGRGR
LAA L + ++++LLAGLGP+YD FVTS+ ++E +TLD ++ HL+T RGG+ ++ RG+
Subjt: TELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMT-------------------------------RGGQQKNHGRRDRGRGR
Query: SQGYAPSCPVG-DRRGP-SARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVR-ERYHGGEQVQ
S + + G R P +AR CQ+C++ H A+ C+HR D SY E SA +T DPNWY+DTGAT+H+TSDL L V E Y G +Q++
Subjt: SQGYAPSCPVG-DRRGP-SARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVR-ERYHGGEQVQ
Query: VGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQ
VGNG G S H +G +Y+SRDVIF+E FPF PP + + Q+ +P L L+ PT LP
Subjt: VGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQ
Query: QSSALLPCESALVVPPMIEASAPPPADDIVQCPVESSAAGQPTTVATVVPSNVDPASTTHPYGTRLKHNIKKLKVCTDETVTY-----LVARSSAS--EP
Q+ P + L P + S PA + S A QPT + + P + +HP TR K NI K K D TV Y L+A ++ S EP
Subjt: QSSALLPCESALVVPPMIEASAPPPADDIVQCPVESSAAGQPTTVATVVPSNVDPASTTHPYGTRLKHNIKKLKVCTDETVTY-----LVARSSAS--EP
Query: TSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
T + +A++ P WR AMN EF AL KN+TW LVP N++ CKWVF++K
Subjt: TSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
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| A0A2N9FW27 Uncharacterized protein | 3.8e-75 | 35.48 | Show/hide |
Query: YLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAANY
++DG+ P ++ +S+ + + NP + QW QDQ VLS L+SS+SE+++ VV TTS++ W TL+RMF++ ++A QI +L+T +K S +++
Subjt: YLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAANY
Query: FRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMT-------------------------------RGGQQKNHG
F+ GLA LAA L + ++++LLAGLGP+YD FVTS+ ++E +TLD ++ HL+T RGG+ ++
Subjt: FRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMT-------------------------------RGGQQKNHG
Query: RRDRGRGRSQGYAPSCPVG-DRRGP-SARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVR-ER
RG+ S + + G R P +AR CQ+C++ H A+ C+HR D SY E SA +T DPNWY+DTGAT+H+TSDL L V E
Subjt: RRDRGRGRSQGYAPSCPVG-DRRGP-SARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVR-ER
Query: YHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVS
Y G +Q++VGNG G S H +G +Y+SRDVIF+E FPF PP + Q+ +P L L+ PT
Subjt: YHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVS
Query: TSASELPQQSSALLPCESALVVPPMIEASAPPPADDIVQCPVESSAAGQPTTVATVVPSNVDPASTTHPYGTRLKHNIKKLKVCTDETVTY-----LVAR
LP Q+ P + L P + S PA + S A QPT + + P + +HP TR K NI K K D TV Y L+A
Subjt: TSASELPQQSSALLPCESALVVPPMIEASAPPPADDIVQCPVESSAAGQPTTVATVVPSNVDPASTTHPYGTRLKHNIKKLKVCTDETVTY-----LVAR
Query: SSAS--EPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
++ S EPT + +A++ P WR AMN EF AL KN+TW LVP N++ CKWVF++K
Subjt: SSAS--EPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
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| A0A2N9GWM4 Uncharacterized protein | 4.3e-74 | 34.57 | Show/hide |
Query: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
G++DGT AP + S + + NP + W+ QDQ +LS L+SS+SE IL VV TTS++ W L+RMF+S +RA + Q+ +L+T KK D S A+
Subjt: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
Query: YFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMT-------------------------------RGGQ----
++ K LA LAA L+D D++++ LAGLG DYD VT++ + +TLD+++ ++ RGG+
Subjt: YFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLMT-------------------------------RGGQ----
Query: -------QKNHGRRDRGRGRSQGYAPSCPVGDRRGPSARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPT--TLAATSSYKIDPNWYSDTGATDHIT
N R+ RGRGR + CP S+R +CQ+C K GHTA+ C+HR D SY E PP L AT +Y DPNWYSD+GAT HIT
Subjt: -------QKNHGRRDRGRGRSQGYAPSCPVGDRRGPSARLSCQICDKVGHTAIRCWHRMDESYQDEPSSAPPT--TLAATSSYKIDPNWYSDTGATDHIT
Query: SDLDRLAVR-ERYHGGEQVQVGNG-------------------------------AGYSSLHE-----GYKCLDTNSGCVYMSRDVIFDENVFPFKRAPP
SDL L VR + YHG +Q++ + +S+H+ GYKC +G Y+SRDVIF E FPF++ P
Subjt: SDLDRLAVR-ERYHGGEQVQVGNG-------------------------------AGYSSLHE-----GYKCLDTNSGCVYMSRDVIFDENVFPFKRAPP
Query: NSSPIMQSTHN--APNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQQSS---ALLPCESALVVPPMIEASAPPPADDIVQCPVESSAA
+P+ QST + P + L L + GP N+ + + T + P+ SS A P ++L V P S+ P D V P +A
Subjt: NSSPIMQSTHN--APNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQQSS---ALLPCESALVVPPMIEASAPPPADDIVQCPVESSAA
Query: GQPTTVATVVPSNVDPASTT---------HPYGTRLKHNIKKLKVCTDETVTYLVAR---------SSASEPTSHITAMEHPLWRQAMNDEFQALQKNKT
+ +T TV +N + +STT HP TR ++ I K K TD T+ Y + + + +EPT H A + P WR+AMN EF AL KN T
Subjt: GQPTTVATVVPSNVDPASTT---------HPYGTRLKHNIKKLKVCTDETVTYLVAR---------SSASEPTSHITAMEHPLWRQAMNDEFQALQKNKT
Query: WHLVPPRAGLNVIDCKWVFKLK
W LVP + N+I CKWVF++K
Subjt: WHLVPPRAGLNVIDCKWVFKLK
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| A0A2N9HRE1 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.8e-72 | 36.64 | Show/hide |
Query: DQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAANYFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDY
DQ +LS L+SS+SE+++ VV TTS++ W TL+RMF++ ++A QI +L+T +K S A++F GLA LAA L + ++++LLAGLGP+Y
Subjt: DQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAANYFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDY
Query: DPFVTSMTTKSEALTLDDVFAHLMTRGGQQK-------------NHGRRD----RGRGRSQGYAPSCPVGDRRGPS----------------ARLSCQIC
D FVTS+ ++E +TLD ++ HL+ + K N+ R GRG +PS G+ PS AR CQ+C
Subjt: DPFVTSMTTKSEALTLDDVFAHLMTRGGQQK-------------NHGRRD----RGRGRSQGYAPSCPVGDRRGPS----------------ARLSCQIC
Query: DKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVR-ERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMS
+++GH A+ C+HR D +Y E S+A +T DPNWY+DTGAT+H+TSDL+ L + E Y G +Q++VGNG G S H G +Y+S
Subjt: DKVGHTAIRCWHRMDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVR-ERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMS
Query: RDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQQSSALLPCESAL-VVPPMIEASAPPPA
DVIF+EN+FPF+ PP +Q P L L+ PT S A+ + S +P SS + P S + P S+ PA
Subjt: RDVIFDENVFPFKRAPPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQQSSALLPCESAL-VVPPMIEASAPPPA
Query: DDIVQCPVESSAAGQPTTVATVVPSNVDPASTTHPYGTRLKHNIKKLKVCTDETVTY-----LVARS--SASEPTSHITAMEHPLWRQAMNDEFQALQKN
+ +A PT+ ++ P + P +++HP TR K NI K K D TV Y L+A + S SEPT + +A++ P WR+AMN EF AL KN
Subjt: DDIVQCPVESSAAGQPTTVATVVPSNVDPASTTHPYGTRLKHNIKKLKVCTDETVTY-----LVARS--SASEPTSHITAMEHPLWRQAMNDEFQALQKN
Query: KTWHLVPPRAGLNVIDCKWVFKLK
+TW LVP N++ CKWVF++K
Subjt: KTWHLVPPRAGLNVIDCKWVFKLK
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| A0A6J1EZF8 uncharacterized protein LOC111437852 | 8.9e-72 | 74.16 | Show/hide |
Query: MDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKR
MDES QDEP S P LAATSS KIDPNWYSDT ATDHITSDLDRLAVRERYHGG+QVQVGNGA GYKCLDT+SG V +SRDVIFDENVFPFKR
Subjt: MDESYQDEPSSAPPTTLAATSSYKIDPNWYSDTGATDHITSDLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKR
Query: APPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQQSSALLPCESALVVPPMIEASAPPPADDIVQCPVESSAAGQ
AP NSSP + THNA +LCTLHL +SSTNL+NDH +S PTNSLDA+ LV TS S+LPQQSSA L C+SAL V PMI AS P PADDI QCPV S AAGQ
Subjt: APPNSSPIMQSTHNAPNLCTLHLSNSSTNLENDHMLMSGPTNSLDAEILVSTSASELPQQSSALLPCESALVVPPMIEASAPPPADDIVQCPVESSAAGQ
Query: PTTVATVVP
PT VA P
Subjt: PTTVATVVP
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-04 | 43.08 | Show/hide |
Query: TYLVARSSASEPTSHITAMEHPLWRQ---AMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
T V S EP S + HP Q AM +E ++LQKN T+ LV G + CKWVFKLK
Subjt: TYLVARSSASEPTSHITAMEHPLWRQ---AMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.9e-11 | 46.25 | Show/hide |
Query: TRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
TR K I KL T+T + + EP S I A++ P W QAM +E AL +NKTW LVPP N++ CKWVFK K
Subjt: TRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.9e-24 | 26.25 | Show/hide |
Query: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
G+LDG+ P P++ A NP Y +W QD+ + S +L ++S + V ATT+ + W+TL++++++ + H TQ+R +L K ++ +
Subjt: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
Query: YFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLM-----------------------------TRGGQQKNHGR
Y + + +LA G + D+ + +L L +Y P + + K TL ++ L+ T N
Subjt: YFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDDVFAHLM-----------------------------TRGGQQKNHGR
Query: RDRGRGRSQGYAPSCPVGDRRGPSARLS------CQICDKVGHTAIRC---WHRMDESYQDEPSS-----APPTTLAATSSYKIDPNWYSDTGATDHITS
R R + P P+ S CQIC GH+A RC H + +P S P LA S Y + NW D+GAT HITS
Subjt: RDRGRGRSQGYAPSCPVGDRRGPSARLS------CQICDKVGHTAIRC---WHRMDESYQDEPSS-----APPTTLAATSSYKIDPNWYSDTGATDHITS
Query: DLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNS
D + L++ + Y GG+ V V +G+ H G L T S
Subjt: DLDRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.7e-24 | 27.27 | Show/hide |
Query: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
G+LDG+ P P++ A NP Y +W QD+ + S +L ++S + V ATT+ + W+TL++++++ + H TQ+R + DQ
Subjt: GYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMSEEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSAAN
Query: YFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTK-----------------SEALTLDD-----VFAHLMTRGGQQKNHGRRDRG---
LA G + D+ + +L L DY P + + K S+ L L+ + A+++T N + +RG
Subjt: YFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTK-----------------SEALTLDD-----VFAHLMTRGGQQKNHGRRDRG---
Query: -----RGRSQGYAPSC--PVGDRRGPSARLS-CQICDKVGHTAIRC--WHRMDESYQDEPSSAPPT------TLAATSSYKIDPNWYSDTGATDHITSDL
RS + PS D R P L CQIC GH+A RC H+ + + S++P T LA S Y + NW D+GAT HITSD
Subjt: -----RGRSQGYAPSC--PVGDRRGPSARLS-CQICDKVGHTAIRC--WHRMDESYQDEPSSAPPT------TLAATSSYKIDPNWYSDTGATDHITSDL
Query: DRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENV
+ L+ + Y GG+ V + +G+ H G L T+S + +++ V++ N+
Subjt: DRLAVRERYHGGEQVQVGNGAGYSSLHEGYKCLDTNSGCVYMSRDVIFDENV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.9e-11 | 25.17 | Show/hide |
Query: GYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKR---------------------------------APPNSSPIMQSTHNAPN----LCTLHLSNSS
GYS Y CL +G +Y SR V FDE FPF APP P + ++ P+ LCT +S+S+
Subjt: GYSSLHEGYKCLDTNSGCVYMSRDVIFDENVFPFKR---------------------------------APPNSSPIMQSTHNAPN----LCTLHLSNSS
Query: TNLENDHMLMSGPTNSLDAEILVSTSASELPQQSSALLPC----------------ESALVVPPMIEASAPPPADDIVQCPVESSAAGQPTTVATVVPS-
+ S + T+ Q S++ P S L P+ P P+ I + SS++ + V+P+
Subjt: TNLENDHMLMSGPTNSLDAEILVSTSASELPQQSSALLPC----------------ESALVVPPMIEASAPPPADDIVQCPVESSAAGQPTTVATVVPS-
Query: -----NVDPASTTHPYGTRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLV-PPRAGLNVIDCKWVFKLK
N TH TR K I+K ++ +Y + ++ SEP + I AM+ WRQAM E A N TW LV PP + ++ C+W+F K
Subjt: -----NVDPASTTHPYGTRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLV-PPRAGLNVIDCKWVFKLK
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 2.2e-06 | 25 | Show/hide |
Query: MGYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMS-EEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSA
MG++DGT L+P +N W +D V L +++ ++ V ++TS++ W ++ F ++ A ++ EL T D
Subjt: MGYLDGTNAAPAKLVPSSTAAGAELVSNPAYNQWYGQDQQVLSGLLSSMS-EEILHDVVAATTSKEAWDTLQRMFSSSTRAHTTQIRVELATSKKRDQSA
Query: ANYFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
A+Y+RK+K LA L + D +++ Y+L GL P +D + + + + DD
Subjt: ANYFRKIKGLATELAAAGSALQDDDVIAYLLAGLGPDYDPFVTSMTTKSEALTLDD
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 4.9e-06 | 35.48 | Show/hide |
Query: TYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
++LV + A EP+++ A E +W AM+DE A++ TW + I CKWV+K+K
Subjt: TYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.1e-12 | 46.25 | Show/hide |
Query: TRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
TR K I KL T+T + + EP S I A++ P W QAM +E AL +NKTW LVPP N++ CKWVFK K
Subjt: TRLKHNIKKLKVCTDETVTYLVARSSASEPTSHITAMEHPLWRQAMNDEFQALQKNKTWHLVPPRAGLNVIDCKWVFKLK
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