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CmoCh15G010480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G010480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosomal protein S7
Genome locationCmo_Chr15:6686566..6688028
RNA-Seq ExpressionCmoCh15G010480
SyntenyCmoCh15G010480
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0790852.1 hypothetical protein [Gossypium harknessii]2.8e-5070.89Show/hide
Query:  ASNCSEILSYMGGLD----------------------------------AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIR
        ASNCSEILSYMGGLD                                  A+ ERDVIKLMVDAV+NIKPICEV+KV +AGT+YDVP IVAKDRQQTLAIR
Subjt:  ASNCSEILSYMGGLD----------------------------------AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIR

Query:  WILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
        WILEA FKRRISYRISLEKCSFAEILDAYRKRGIAR+KRENLH L+STNRSFAHFRWW
Subjt:  WILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW

THU43499.1 hypothetical protein C4D60_Mb00t01000 [Musa balbisiana]9.7e-5164.86Show/hide
Query:  ERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQ------------------------------------IERDVIKLMVDAVDNIKPICE
        ERGELADK+GQ RLRN +F          CSEILSY+G LD +                                     ERDVIKLMVDAVDNIKPICE
Subjt:  ERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQ------------------------------------IERDVIKLMVDAVDNIKPICE

Query:  VKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRW
        V KVGVAGT YDVP IVA+DRQQTLAIRWIL A FKRRISYRISLEKCSFAEILDAYRKRGIAR K+ENLH LAS+NRSFAHFRW
Subjt:  VKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRW

XP_023521058.1 uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo]1.8e-6878.92Show/hide
Query:  MERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLD----------------------------------AQIERDVIKLMVDAVDNIKPICEV
        MERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLD                                  AQ ERDVIKLMVDAVDNIKPICEV
Subjt:  MERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLD----------------------------------AQIERDVIKLMVDAVDNIKPICEV

Query:  KKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
        +KVGVAGTLYDVP IVA+DRQQTLAIRWILEA FKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
Subjt:  KKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW

XP_038876459.1 ribosomal protein S7, mitochondrial [Benincasa hispida]1.0e-6072.97Show/hide
Query:  MERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLD----------------------------------AQIERDVIKLMVDAVDNIKPICEV
        MERGELADKDGQ RL NIN SASSSKAASNCSEILSYMGGLD                                  AQ ERDVIKLMVDAV+NIKPICEV
Subjt:  MERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLD----------------------------------AQIERDVIKLMVDAVDNIKPICEV

Query:  KKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
        +KVGVAGT+YD+P IVA+DRQQTLAI  ILEA FKRRISYRISLEK SF EILDAYRKRGIAR+KRENLHRLASTNRSFAHFRWW
Subjt:  KKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW

YP_003587368.1 ribosomal protein S7 [Cucurbita pepo]3.1e-4975Show/hide
Query:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR
        G L  +  QL  + +NF     K     + +      L AQ ERDVIKLMVDAVDNIKPICEV+KVGVAGTLYDVP IVA+DRQQTLAIRWILEA FKRR
Subjt:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR

Query:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
        ISYRISLEKC FAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW

TrEMBL top hitse value%identityAlignment
A0A4S8I7E6 Ribosomal_S7 domain-containing protein4.7e-5164.86Show/hide
Query:  ERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQ------------------------------------IERDVIKLMVDAVDNIKPICE
        ERGELADK+GQ RLRN +F          CSEILSY+G LD +                                     ERDVIKLMVDAVDNIKPICE
Subjt:  ERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQ------------------------------------IERDVIKLMVDAVDNIKPICE

Query:  VKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRW
        V KVGVAGT YDVP IVA+DRQQTLAIRWIL A FKRRISYRISLEKCSFAEILDAYRKRGIAR K+ENLH LAS+NRSFAHFRW
Subjt:  VKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRW

A0A6B9MKJ0 Ribosomal protein S72.6e-4973.65Show/hide
Query:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR
        G L  +  QL  + +NF     K  +    I+       AQ ERDVIKLMVDAVDNIKPICEV+KVGVAGT+YDVP IVA+DRQQTLAIRWILEA FKRR
Subjt:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR

Query:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILDAYRKRGIAR+KREN+HRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW

A0A6N2LA06 Ribosomal_S7 domain-containing protein1.5e-4972.19Show/hide
Query:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR
        G L  +  QL  + +NF     K  +    I+       A+ ERDVIKLMVDA++NIKPICEV+KVGVAGT+YDVP IVA+DRQQTLAIRWILEA FKRR
Subjt:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR

Query:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWWSNE
        ISYRISLEKCSFAEILDAYRKRGIAR+KRENLH LASTNRSFAHFRWWSNE
Subjt:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWWSNE

A0A7J9FZT5 Ribosomal_S7 domain-containing protein1.4e-5070.89Show/hide
Query:  ASNCSEILSYMGGLD----------------------------------AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIR
        ASNCSEILSYMGGLD                                  A+ ERDVIKLMVDAV+NIKPICEV+KV +AGT+YDVP IVAKDRQQTLAIR
Subjt:  ASNCSEILSYMGGLD----------------------------------AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIR

Query:  WILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
        WILEA FKRRISYRISLEKCSFAEILDAYRKRGIAR+KRENLH L+STNRSFAHFRWW
Subjt:  WILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW

D5I3F4 Ribosomal protein S71.5e-4975Show/hide
Query:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR
        G L  +  QL  + +NF     K     + +      L AQ ERDVIKLMVDAVDNIKPICEV+KVGVAGTLYDVP IVA+DRQQTLAIRWILEA FKRR
Subjt:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR

Query:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
        ISYRISLEKC FAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW

SwissProt top hitse value%identityAlignment
P26867 Ribosomal protein S7, mitochondrial1.2e-3060.95Show/hide
Query:  DVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYR-ISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFA
        DVIKL+V+A++N+KPICEVKKV ++GT   VP I+A +RQ+TLAIRW+LE+  KRR+  + ISL++C +AEIL+A +K GIAR+KR++LH+LA  NRSF+
Subjt:  DVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYR-ISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFA

Query:  HFRWW
        H+RWW
Subjt:  HFRWW

P92557 Ribosomal protein S7, mitochondrial4.2e-4988.99Show/hide
Query:  AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTN
        A+ ERDVIKLMVDAV+NIKPICEV KVGVAGT+YDVP IVA+DRQQTLAIRWILEA FKRRISYRISLEKCSFAEILDAY+KRG AR+KRENLH LASTN
Subjt:  AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTN

Query:  RSFAHFRWW
        RSFAHFRWW
Subjt:  RSFAHFRWW

Q01902 Ribosomal protein S7, mitochondrial4.2e-4988.99Show/hide
Query:  AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTN
        A+ ERDVIKLMVDAVDNIKPICEV KVGVAGT+YDVP IVA+DRQQTLAIRWIL A FKRRISYRISLEKCSFAEILDAYRKRGI+R++RENLH LASTN
Subjt:  AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTN

Query:  RSFAHFRWW
        RSFAHFRWW
Subjt:  RSFAHFRWW

Q0BUQ3 30S ribosomal protein S75.6e-1741.53Show/hide
Query:  EILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKR
        ++L   GG  A    D +++  +A+DN+KP  EV+   V G  Y VP  V  DR+Q LAIRWI++A+ KR      ++E+    E+LDA   RG A +KR
Subjt:  EILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKR

Query:  ENLHRLASTNRSFAHFRW
        E+ HR+A  N++F+H+RW
Subjt:  ENLHRLASTNRSFAHFRW

Q9MF82 Ribosomal protein S7, mitochondrial5.7e-4666.89Show/hide
Query:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR
        G L  +  QL  + +NF     K     + +      L A+ E DVIKLM+DAV+NIKPIC+V+KV VAGT+YDVP IVA+DRQQTLAIRWILEA FKRR
Subjt:  GELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRR

Query:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
        ISYRISLEKC F EILDAYRKRGI+R+KRENLH LAS NRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein3.0e-5088.99Show/hide
Query:  AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTN
        A+ ERDVIKLMVDAV+NIKPICEV KVGVAGT+YDVP IVA+DRQQTLAIRWILEA FKRRISYRISLEKCSFAEILDAY+KRG AR+KRENLH LASTN
Subjt:  AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTN

Query:  RSFAHFRWW
        RSFAHFRWW
Subjt:  RSFAHFRWW

ATCG00900.1 Ribosomal protein S7p/S5e family protein6.8e-1032.14Show/hide
Query:  LDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFK---RRISYRISLEKCSFAEILDAYRKRGIARQKRENLHR
        +  + E + + ++  A+  + P   VK   V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A +K+E  HR
Subjt:  LDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFK---RRISYRISLEKCSFAEILDAYRKRGIARQKRENLHR

Query:  LASTNRSFAHFR
        +A  NR+FAHFR
Subjt:  LASTNRSFAHFR

ATCG01240.1 ribosomal protein S76.8e-1032.14Show/hide
Query:  LDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFK---RRISYRISLEKCSFAEILDAYRKRGIARQKRENLHR
        +  + E + + ++  A+  + P   VK   V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A +K+E  HR
Subjt:  LDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFK---RRISYRISLEKCSFAEILDAYRKRGIARQKRENLHR

Query:  LASTNRSFAHFR
        +A  NR+FAHFR
Subjt:  LASTNRSFAHFR

ATMG01270.1 mitochondrial ribosomal protein S73.0e-5088.99Show/hide
Query:  AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTN
        A+ ERDVIKLMVDAV+NIKPICEV KVGVAGT+YDVP IVA+DRQQTLAIRWILEA FKRRISYRISLEKCSFAEILDAY+KRG AR+KRENLH LASTN
Subjt:  AQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTN

Query:  RSFAHFRWW
        RSFAHFRWW
Subjt:  RSFAHFRWW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAGGGGAGTTGGCTGATAAAGATGGACAGTTACGATTGCGTAATATCAATTTCTCGGCCTCGTCATCGAAAGCGGCTTCCAATTGCTCGGAAATTCTCAGCTA
TATGGGGGGCTTGGATGCTCAAATTGAACGCGATGTAATCAAACTAATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCAAAAAAGTAGGAGTAGCAGGTA
CTCTTTATGATGTCCCTTGGATTGTAGCCAAGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCTACTTTCAAACGACGTATAAGCTACAGGATAAGCTTA
GAGAAATGTTCATTTGCTGAGATACTTGATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCA
TTTCAGATGGTGGTCGAATGAATACGAAAGGGAGATCCATACACAAATAGGCCATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAGGGGAGTTGGCTGATAAAGATGGACAGTTACGATTGCGTAATATCAATTTCTCGGCCTCGTCATCGAAAGCGGCTTCCAATTGCTCGGAAATTCTCAGCTA
TATGGGGGGCTTGGATGCTCAAATTGAACGCGATGTAATCAAACTAATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCAAAAAAGTAGGAGTAGCAGGTA
CTCTTTATGATGTCCCTTGGATTGTAGCCAAGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCTACTTTCAAACGACGTATAAGCTACAGGATAAGCTTA
GAGAAATGTTCATTTGCTGAGATACTTGATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCA
TTTCAGATGGTGGTCGAATGAATACGAAAGGGAGATCCATACACAAATAGGCCATGAATGA
Protein sequenceShow/hide protein sequence
MERGELADKDGQLRLRNINFSASSSKAASNCSEILSYMGGLDAQIERDVIKLMVDAVDNIKPICEVKKVGVAGTLYDVPWIVAKDRQQTLAIRWILEATFKRRISYRISL
EKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWWSNEYEREIHTQIGHE