; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G010570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G010570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPMD domain-containing protein
Genome locationCmo_Chr15:6880424..6881454
RNA-Seq ExpressionCmoCh15G010570
SyntenyCmoCh15G010570
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5070642.1 hypothetical protein JHK84_057296 [Glycine max]5.8e-4179.63Show/hide
Query:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC
        ARPLCHLQYPVAYLSRLQRILP A+WELR+KA+   +P     QRHVPLG + PLLLVG +  GA VASSPDSDLEAFSHNP HGSFAPLAFQPSAMTNC
Subjt:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC

Query:  ANQRFLSY
        ANQRFLSY
Subjt:  ANQRFLSY

KAG8363055.1 hypothetical protein BUALT_BualtUnG0008900 [Buddleja alternifolia]5.8e-4180.56Show/hide
Query:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC
        ARPLC LQYPVAYLSRLQRILP A+WEL +KAA    P +GL QRHVPLGA+ PLL VG +  G  VASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC
Subjt:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC

Query:  ANQRFLSY
        ANQRFLSY
Subjt:  ANQRFLSY

OPH47798.1 hypothetical protein B4U81_25600, partial [Vibrio campbellii]4.7e-4378.33Show/hide
Query:  GRVRGEG---AGARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFA
        GR R E      ARPLC LQYPVAYLSRLQRILP A+WEL + A     P  GL QRHVPLGA RPLLLVG +A GACVASSPDSDLEAFSHNPAHGSFA
Subjt:  GRVRGEG---AGARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFA

Query:  PLAFQPSAMTNCANQRFLSY
        PLAFQPSAMTNCANQRFLSY
Subjt:  PLAFQPSAMTNCANQRFLSY

RZB41103.1 hypothetical protein D0Y65_055489 [Glycine soja]5.8e-4179.63Show/hide
Query:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC
        ARPLCHLQYPVAYLSRLQRILP A+WELR+KA+   +P     QRHVPLG + PLLLVG +  GA VASSPDSDLEAFSHNP HGSFAPLAFQPSAMTNC
Subjt:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC

Query:  ANQRFLSY
        ANQRFLSY
Subjt:  ANQRFLSY

RZB70539.1 hypothetical protein D0Y65_035487 [Glycine soja]3.4e-4172Show/hide
Query:  GRGRVRGEGA------GARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPA
        G GR++   A       ARPLCHLQYPVAYLSRLQRILP A+WELR+KA+   +P     QRHVPLG + PLLLVG +  GA VASSPDSDLEAFSHNP 
Subjt:  GRGRVRGEGA------GARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPA

Query:  HGSFAPLAFQPSAMTNCANQRFLSY
        HGSFAPLAFQPSAMTNCANQRFLSY
Subjt:  HGSFAPLAFQPSAMTNCANQRFLSY

TrEMBL top hitse value%identityAlignment
A0A1Q3DGA9 Uncharacterized protein (Fragment)1.1e-4082.41Show/hide
Query:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC
        AR LCHLQYPVAYLSRL+RILP A    R+KAA    PS+GL QRHVPLG  RPLLLVG +A GACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC
Subjt:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC

Query:  ANQRFLSY
        ANQRFLSY
Subjt:  ANQRFLSY

A0A445EXN4 Uncharacterized protein2.8e-4179.63Show/hide
Query:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC
        ARPLCHLQYPVAYLSRLQRILP A+WELR+KA+   +P     QRHVPLG + PLLLVG +  GA VASSPDSDLEAFSHNP HGSFAPLAFQPSAMTNC
Subjt:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC

Query:  ANQRFLSY
        ANQRFLSY
Subjt:  ANQRFLSY

A0A445H9X1 Uncharacterized protein1.6e-4172Show/hide
Query:  GRGRVRGEGA------GARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPA
        G GR++   A       ARPLCHLQYPVAYLSRLQRILP A+WELR+KA+   +P     QRHVPLG + PLLLVG +  GA VASSPDSDLEAFSHNP 
Subjt:  GRGRVRGEGA------GARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPA

Query:  HGSFAPLAFQPSAMTNCANQRFLSY
        HGSFAPLAFQPSAMTNCANQRFLSY
Subjt:  HGSFAPLAFQPSAMTNCANQRFLSY

A0A6A5L4L2 Uncharacterized protein2.4e-4077.78Show/hide
Query:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC
        ARPLCHLQYPVAYLSRLQRILP AQW +  +A+ E  P +G  QRHVPLG + PLLLVG +A G  +ASSPDSDLEAFSHNP HGSFAPLAFQPSAMTNC
Subjt:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC

Query:  ANQRFLSY
        ANQRFLSY
Subjt:  ANQRFLSY

A0A6N2KRY6 Uncharacterized protein2.4e-4082.24Show/hide
Query:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC
        ARPLCHLQYPVAYLSRLQRILP A+WEL +KAA    P +GL QRHVP  AKRPLL VGN+  GA VASSPDSDLEAFSHNP HGSFAPLAFQPSAMTNC
Subjt:  ARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNC

Query:  ANQRFLS
        ANQRFLS
Subjt:  ANQRFLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGGAGCGTGCGCGCGCACGGGATGTGTGCGGTGGGCGTGCGGGGGCGCGGTCGGGGGCGTGTGCGGGGGGAGGGCGCGGGAGCAAGGCCACTCTGCCAC
TTACAATACCCTGTCGCATATTTAAGTCGTCTGCAAAGGATTCTACCCATCGCTCAGTGGGAATTACGTTACAAGGCAGCCCTTGAGACTCATCCGTCACAAGGG
CTTAGCCAACGACACGTGCCTTTGGGGGCCAAAAGGCCCCTACTGCTGGTCGGCAATCAAGCGATGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAG
GCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGGAGCGTGCGCGCGCACGGGATGTGTGCGGTGGGCGTGCGGGGGCGCGGTCGGGGGCGTGTGCGGGGGGAGGGCGCGGGAGCAAGGCCACTCTGCCAC
TTACAATACCCTGTCGCATATTTAAGTCGTCTGCAAAGGATTCTACCCATCGCTCAGTGGGAATTACGTTACAAGGCAGCCCTTGAGACTCATCCGTCACAAGGG
CTTAGCCAACGACACGTGCCTTTGGGGGCCAAAAGGCCCCTACTGCTGGTCGGCAATCAAGCGATGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAG
GCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAG
Protein sequenceShow/hide protein sequence
MGGSVRAHGMCAVGVRGRGRGRVRGEGAGARPLCHLQYPVAYLSRLQRILPIAQWELRYKAALETHPSQGLSQRHVPLGAKRPLLLVGNQAMGACVASSPDSDLE
AFSHNPAHGSFAPLAFQPSAMTNCANQRFLSY