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CmoCh15G010590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G010590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein TAR1
Genome locationCmo_Chr15:6883039..6883938
RNA-Seq ExpressionCmoCh15G010590
SyntenyCmoCh15G010590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PHT25560.1 hypothetical protein CQW23_34815 [Capsicum baccatum]1.4e-3866.67Show/hide
Query:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTR
        MAAPPGL PKVLQRPPRPPTHRGLA APTAG                                  +AHTRTLL+RSRSVGGA   GIPP+SFLAPYGFTR
Subjt:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTR

Query:  PLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA
        PLTRTHVRLLGPCFKTGRMGSPQA  RS QMPKHA
Subjt:  PLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA

PHT26171.1 Protein TAR1 [Capsicum baccatum]1.8e-3867.16Show/hide
Query:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRP
        AAPPGL PKVLQRPPRPPTHRGLALAPTAG                                  +AHTRTLL+RSRSVGGA   GIPP+SFLAPYGFTRP
Subjt:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRP

Query:  LTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA
        LTRTHVRLLGPCFKTGRMGSPQA  RS QMPKHA
Subjt:  LTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA

PHT26174.1 hypothetical protein CQW23_34213 [Capsicum baccatum]3.3e-3765.67Show/hide
Query:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTR
        MAAPPGL PKVLQRPP PPTHRGLA APTAG                                  +AHTRTLL+RSRSVGGA   GIPP+SFLAPYGFTR
Subjt:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTR

Query:  PLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKH
        PLTRTHVRLLGPCFKTGRMGSPQA  RS QMPKH
Subjt:  PLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKH

QHN90752.1 hypothetical protein DS421_17g569170 [Arachis hypogaea]2.2e-4480.34Show/hide
Query:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAGHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRPLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA
        AAPPGL P+VLQRPPRPPTHRG+ALAPTAGHA TRTL +RS SVGGAT  GIPP+SFLAP GF  PLTRTHVRLLGPCFKTGRMGSPQADARS Q+PKHA
Subjt:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAGHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRPLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA

Query:  KRRVLPTTIGTTTSPQA
          R LP+TI T T P+A
Subjt:  KRRVLPTTIGTTTSPQA

QHN92734.1 hypothetical protein DS421_17g586440 [Arachis hypogaea]5.5e-4076.07Show/hide
Query:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAGHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRPLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA
        AAPPGL P+VLQRPPRPPTHRG+ALAPTAGHA TRTL +RS SVGGAT  GIPP+SFLAP GF  PLTRTHV    PCFKTGR+GSPQADARS Q+PKHA
Subjt:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAGHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRPLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA

Query:  KRRVLPTTIGTTTSPQA
          R LP+TI T T P+A
Subjt:  KRRVLPTTIGTTTSPQA

TrEMBL top hitse value%identityAlignment
A0A2G2UXT3 Uncharacterized protein6.5e-3966.67Show/hide
Query:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTR
        MAAPPGL PKVLQRPPRPPTHRGLA APTAG                                  +AHTRTLL+RSRSVGGA   GIPP+SFLAPYGFTR
Subjt:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTR

Query:  PLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA
        PLTRTHVRLLGPCFKTGRMGSPQA  RS QMPKHA
Subjt:  PLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA

A0A2G2UZH4 Protein TAR18.5e-3967.16Show/hide
Query:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRP
        AAPPGL PKVLQRPPRPPTHRGLALAPTAG                                  +AHTRTLL+RSRSVGGA   GIPP+SFLAPYGFTRP
Subjt:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRP

Query:  LTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA
        LTRTHVRLLGPCFKTGRMGSPQA  RS QMPKHA
Subjt:  LTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHA

A0A2G2UZK5 Uncharacterized protein1.6e-3765.67Show/hide
Query:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTR
        MAAPPGL PKVLQRPP PPTHRGLA APTAG                                  +AHTRTLL+RSRSVGGA   GIPP+SFLAPYGFTR
Subjt:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTR

Query:  PLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKH
        PLTRTHVRLLGPCFKTGRMGSPQA  RS QMPKH
Subjt:  PLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKH

A0A2G2V476 Protein TAR12.1e-3763.83Show/hide
Query:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRP
        AAPPGL PKVLQRPPRPPTHRGLA APTAG                                  +AHTRTLL+RSRSVGGA   GIPP+SFLAPYGFTRP
Subjt:  AAPPGLTPKVLQRPPRPPTHRGLALAPTAG----------------------------------HAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRP

Query:  LTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHAK-RRVLP
        LTRTHVRLLGPC KTGRMGSPQA  +S QMPKHA+  R LP
Subjt:  LTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHAK-RRVLP

A0A7N2LJ11 Uncharacterized protein1.4e-4482.05Show/hide
Query:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAGHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRPLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKH
        MAAPP L P+VLQRPPRPPTHRGL LAPTA +A TRTLL+RSRSVGGAT KGIPP+SFL PYGF  PLTRTHVRLLGPCFKTGRMGSPQADA+S QMP+H
Subjt:  MAAPPGLTPKVLQRPPRPPTHRGLALAPTAGHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRPLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKH

Query:  AKRRVLPTTIGTTTSPQ
        A RR LPTTI   TSPQ
Subjt:  AKRRVLPTTIGTTTSPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTCCGCCCGGGCTCACGCCCAAGGTTTTGCAGCGACCACCGCGCCCTCCTACTCATCGGGGCCTAGCACTTGCCCCGACGGCCGGGCATGCTCACACTCGAAC
CCTTCTCAAAAGATCAAGGTCGGTCGGTGGTGCAACCCACAAAGGGATCCCACCAGTCAGCTTCCTTGCGCCTTACGGGTTTACTCGCCCGTTAACTCGCACACATGTCA
GACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAAAAGGCGCGTGCTGCCAACCACGATC
GGGACGACGACGTCTCCACAAGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTCCGCCCGGGCTCACGCCCAAGGTTTTGCAGCGACCACCGCGCCCTCCTACTCATCGGGGCCTAGCACTTGCCCCGACGGCCGGGCATGCTCACACTCGAAC
CCTTCTCAAAAGATCAAGGTCGGTCGGTGGTGCAACCCACAAAGGGATCCCACCAGTCAGCTTCCTTGCGCCTTACGGGTTTACTCGCCCGTTAACTCGCACACATGTCA
GACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAAAAGGCGCGTGCTGCCAACCACGATC
GGGACGACGACGTCTCCACAAGCGTAA
Protein sequenceShow/hide protein sequence
MAAPPGLTPKVLQRPPRPPTHRGLALAPTAGHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYGFTRPLTRTHVRLLGPCFKTGRMGSPQADARSTQMPKHAKRRVLPTTI
GTTTSPQA