; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G010600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G010600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein, putative
Genome locationCmo_Chr15:6883982..6884434
RNA-Seq ExpressionCmoCh15G010600
SyntenyCmoCh15G010600
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062869.1 putative transmembrane protein [Cucumis melo var. makuwa]7.1e-7795.33Show/hide
Query:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
        MPQVDWRTG +PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
Subjt:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
        FQGTCARS AEDASPDYNS+ E ARFSSWALPGSLAVT+GILVSFFSSAY
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY

XP_022933354.1 uncharacterized protein LOC111440692 [Cucurbita moschata]5.3e-8099.33Show/hide
Query:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
        MPQVDWRTGL PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
Subjt:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
        FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY

XP_022975713.1 uncharacterized protein LOC111475769 [Cucurbita maxima]2.9e-7898Show/hide
Query:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
        MPQVDWRTGL PFHIRLGHI GPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG IPKQPDSLTAPRGATGSERNGALTLSGAP
Subjt:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
        FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY

XP_023520622.1 uncharacterized protein LOC111784033 [Cucurbita pepo subsp. pepo]2.6e-7998.67Show/hide
Query:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
        MPQVDWRTGL+PFHIRL HIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
Subjt:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
        FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY

XP_023552350.1 uncharacterized protein LOC111810043 [Cucurbita pepo subsp. pepo]2.6e-7998.67Show/hide
Query:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
        MPQVDWRTGL+PFHIRL HIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
Subjt:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
        FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY

TrEMBL top hitse value%identityAlignment
A0A072TTW3 Transmembrane protein, putative1.8e-6591.37Show/hide
Query:  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAE
        PFHIR  HI GPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWGCIPKQPDSLTAPRGATGSE NGALTLSGAPFQGT ARSVAE
Subjt:  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAE

Query:  DASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
        DASPDYNSNAEG RFS WA PGSL++T GILVSFFSSAY
Subjt:  DASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY

A0A0A0KEK9 Uncharacterized protein3.0e-7395.07Show/hide
Query:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
        MPQVDWRTG +PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
Subjt:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGIL
        FQGTCARS AEDASPDYNSN + ARFSSWALPGSLAVT+GIL
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGIL

A0A5A7VB87 Putative transmembrane protein3.5e-7795.33Show/hide
Query:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
        MPQVDWRTG +PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
Subjt:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
        FQGTCARS AEDASPDYNS+ E ARFSSWALPGSLAVT+GILVSFFSSAY
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY

A0A6J1EZI8 uncharacterized protein LOC1114406922.6e-8099.33Show/hide
Query:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
        MPQVDWRTGL PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
Subjt:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
        FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY

A0A6J1IK28 uncharacterized protein LOC1114757691.4e-7898Show/hide
Query:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP
        MPQVDWRTGL PFHIRLGHI GPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG IPKQPDSLTAPRGATGSERNGALTLSGAP
Subjt:  MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
        FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCAAGTCGATTGGCGGACTGGCTTAACACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTC
TCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCA
AACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGTCGCT
GAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTAAGTTTCTTTTC
CTCCGCTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCAAGTCGATTGGCGGACTGGCTTAACACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTC
TCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCA
AACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGTCGCT
GAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTAAGTTTCTTTTC
CTCCGCTTATTGA
Protein sequenceShow/hide protein sequence
MPQVDWRTGLTPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVA
EDASPDYNSNAEGARFSSWALPGSLAVTKGILVSFFSSAY