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CmoCh15G010850 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G010850
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionImportin subunit beta-1
Genome locationCmo_Chr15:7195860..7196362
RNA-Seq ExpressionCmoCh15G010850
SyntenyCmoCh15G010850
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042542.1 importin subunit beta-1 [Cucumis melo var. makuwa]3.9e-2783.75Show/hide
Query:  MHMGVLSWGPDCIFQVFTLRTTGSCSLLVVTNTCIIIIIIMKALLTIALAASSRDLVCHGRNGRRDRPLAPPV-LGFALP
        MHMGVLSWGPDCI QVFTLRTTGSCSLLVVTN+C  II+IMKALLTIALAASSRDLVCHGR+G+R+RPLAPPV L +++P
Subjt:  MHMGVLSWGPDCIFQVFTLRTTGSCSLLVVTNTCIIIIIIMKALLTIALAASSRDLVCHGRNGRRDRPLAPPV-LGFALP
KGN49854.1 hypothetical protein Csa_000509 [Cucumis sativus]1.7e-2785Show/hide
Query:  MHMGVLSWGPDCIFQVFTLRTTGSCSLLVVTNTCIIIIIIMKALLTIALAASSRDLVCHGRNGRRDRPLAPPV-LGFALP
        MHMGVLSWGPDCI QVFTLRTTGSCSLLVVTN+C  II+IMKALLTIALAASSRDLVCHGR+GRR+RPLAPPV L +++P
Subjt:  MHMGVLSWGPDCIFQVFTLRTTGSCSLLVVTNTCIIIIIIMKALLTIALAASSRDLVCHGRNGRRDRPLAPPV-LGFALP
TrEMBL top hitse value%identityAlignment
A0A0A0KLW1 Uncharacterized protein8.5e-2885Show/hide
Query:  MHMGVLSWGPDCIFQVFTLRTTGSCSLLVVTNTCIIIIIIMKALLTIALAASSRDLVCHGRNGRRDRPLAPPV-LGFALP
        MHMGVLSWGPDCI QVFTLRTTGSCSLLVVTN+C  II+IMKALLTIALAASSRDLVCHGR+GRR+RPLAPPV L +++P
Subjt:  MHMGVLSWGPDCIFQVFTLRTTGSCSLLVVTNTCIIIIIIMKALLTIALAASSRDLVCHGRNGRRDRPLAPPV-LGFALP
A0A5A7TGL2 Importin subunit beta-11.9e-2783.75Show/hide
Query:  MHMGVLSWGPDCIFQVFTLRTTGSCSLLVVTNTCIIIIIIMKALLTIALAASSRDLVCHGRNGRRDRPLAPPV-LGFALP
        MHMGVLSWGPDCI QVFTLRTTGSCSLLVVTN+C  II+IMKALLTIALAASSRDLVCHGR+G+R+RPLAPPV L +++P
Subjt:  MHMGVLSWGPDCIFQVFTLRTTGSCSLLVVTNTCIIIIIIMKALLTIALAASSRDLVCHGRNGRRDRPLAPPV-LGFALP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATATGGGTGTGTTGAGTTGGGGTCCGGATTGCATCTTTCAAGTCTTCACTCTCAGGACAACGGGAAGCTGTTCACTTCTAGTTGTCACTAACACTTGCATC
ATCATCATCATCATCATGAAAGCATTGCTAACTATTGCATTAGCAGCGTCAAGTCGGGATCTTGTATGTCATGGTAGAAATGGGAGGAGGGATCGTCCATTAGCG
CCCCCAGTTCTGGGGTTTGCCTTGCCATCAAATGGTTTTGGGTTGTGGAAATGGATCAAGTACAGGAGTGTTCGTTCACTTCTTCTTCCCCTGATTAAACACCCT
AGTGCTTTTTTCTCTAAACTTCTACTCTCTAGCAGATCTAGTTCGACACTTTTTACCCTTTGTTTATTTTTTCTGCATCAGTCTTGTGAATTTTTTCATGGTCTG
GTTGTATTCTGGTCTTTCCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATATGGGTGTGTTGAGTTGGGGTCCGGATTGCATCTTTCAAGTCTTCACTCTCAGGACAACGGGAAGCTGTTCACTTCTAGTTGTCACTAACACTTGCATC
ATCATCATCATCATCATGAAAGCATTGCTAACTATTGCATTAGCAGCGTCAAGTCGGGATCTTGTATGTCATGGTAGAAATGGGAGGAGGGATCGTCCATTAGCG
CCCCCAGTTCTGGGGTTTGCCTTGCCATCAAATGGTTTTGGGTTGTGGAAATGGATCAAGTACAGGAGTGTTCGTTCACTTCTTCTTCCCCTGATTAAACACCCT
AGTGCTTTTTTCTCTAAACTTCTACTCTCTAGCAGATCTAGTTCGACACTTTTTACCCTTTGTTTATTTTTTCTGCATCAGTCTTGTGAATTTTTTCATGGTCTG
GTTGTATTCTGGTCTTTCCTGTGA
Protein sequenceShow/hide protein sequence
MHMGVLSWGPDCIFQVFTLRTTGSCSLLVVTNTCIIIIIIMKALLTIALAASSRDLVCHGRNGRRDRPLAPPVLGFALPSNGFGLWKWIKYRSVRSLLLPLIKHP
SAFFSKLLLSSRSSSTLFTLCLFFLHQSCEFFHGLVVFWSFL