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CmoCh15G010860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G010860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein PSY2-like
Genome locationCmo_Chr15:7197333..7197963
RNA-Seq ExpressionCmoCh15G010860
SyntenyCmoCh15G010860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579317.1 hypothetical protein SDJN03_23765, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3198.67Show/hide
Query:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDKVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDKVGGVGMNGRKLMR DVEDYDDTKANNRHDPKKPGNGKP
Subjt:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDKVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

KGN49855.1 hypothetical protein Csa_000412 [Cucumis sativus]8.7e-1569.74Show/hide
Query:  LKFFLLLLLLLSISVPFSSG-VVESGRN----VKVTDKVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        LKFF  LL LLSIS+PFSSG VVE  R+     K   K+GG+ MNGRKLM LD++DYD+TKANNRHDPKKPGNGKP
Subjt:  LKFFLLLLLLLSISVPFSSG-VVESGRN----VKVTDKVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

XP_022922224.1 protein PSY2-like [Cucurbita moschata]9.5e-3094.94Show/hide
Query:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDK----VGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDK    VGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
Subjt:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDK----VGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

XP_023550102.1 protein PSY2-like [Cucurbita pepo subsp. pepo]4.4e-2788.61Show/hide
Query:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDK----VGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        MSPSLKFFLLLLLLLSISVPFSSG+VES R+VKV DK    VGGVGMNGRKLMRLD+EDYDDTKANNRHDPKKPGNGKP
Subjt:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDK----VGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

XP_038906524.1 protein PSY2-like [Benincasa hispida]5.4e-1768.35Show/hide
Query:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTD----KVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        MS  LKFF  LLLLLSIS+P SS +VE  R++K+T+    KVG + MN RKLM LDV+DYD+TKANNRHDPKKPGNGKP
Subjt:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTD----KVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

TrEMBL top hitse value%identityAlignment
A0A0A0KJF2 Uncharacterized protein4.2e-1569.74Show/hide
Query:  LKFFLLLLLLLSISVPFSSG-VVESGRN----VKVTDKVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        LKFF  LL LLSIS+PFSSG VVE  R+     K   K+GG+ MNGRKLM LD++DYD+TKANNRHDPKKPGNGKP
Subjt:  LKFFLLLLLLLSISVPFSSG-VVESGRN----VKVTDKVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

A0A5D3C6H5 Putative Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase2.2e-1170.91Show/hide
Query:  VVESGRNVKVTD----KVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        VVES ++  + D    K+GGV MNGRKLM LDV+DYD+TKANNRHDPKKPGNGKP
Subjt:  VVESGRNVKVTD----KVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

A0A6J1C8Y2 protein PSY22.7e-1462.5Show/hide
Query:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTD----KVGG-VGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        MS  LK  LLLLL L   +PFSSG+ +  R+ K+ D    KVGG + MN RKLM LD++DYD+TKANNRHDPKKPGNGKP
Subjt:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTD----KVGG-VGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

A0A6J1E2S8 protein PSY2-like4.6e-3094.94Show/hide
Query:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDK----VGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDK    VGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
Subjt:  MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDK----VGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

A0A6J1H1E3 uncharacterized protein LOC1114594771.1e-0753.85Show/hide
Query:  SPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTD----KVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP
        S  +K FLLLLLL+ +   FSSG+V+   +V++ D    KV G  +  RKL  LD+ DYDD +ANNRHDPK+PGNGKP
Subjt:  SPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTD----KVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCAAGCCTTAAATTCTTTCTCCTCCTTCTTCTCCTGCTCTCCATCTCCGTTCCTTTCTCTTCGGGCGTGGTTGAATCGGGTCGAAACGTCAAGGTTACAGATAA
GGTTGGTGGGGTCGGAATGAATGGAAGGAAGCTTATGAGACTCGACGTAGAGGACTACGATGATACGAAAGCGAATAATAGGCACGATCCGAAGAAGCCCGGAAATGGAA
AGCCTTAA
mRNA sequenceShow/hide mRNA sequence
CCTCATTACAATACAATGTCTCCAAGCCTTAAATTCTTTCTCCTCCTTCTTCTCCTGCTCTCCATCTCCGTTCCTTTCTCTTCGGGCGTGGTTGAATCGGGTCGAAACGT
CAAGGTTACAGATAAGGTTGGTGGGGTCGGAATGAATGGAAGGAAGCTTATGAGACTCGACGTAGAGGACTACGATGATACGAAAGCGAATAATAGGCACGATCCGAAGA
AGCCCGGAAATGGAAAGCCTTAAAAGAGGGTCTCTCTTTGGTGCTTATGGTTTAAATAACATATGCTATTGGGTTTGTGGTTATGTTTGAGCAGCTCTTGTTTGGTGTAA
GATATGGATGATTTGATGAAGTTTTAAGCTCAAATGCTTCATGGTTTGGCTCATTGAAACTTGGTGGTGGATCCATTAGAGAGAGATAAAAGTGGATAAGAACAGAATTA
AAGAGAATGAAG
Protein sequenceShow/hide protein sequence
MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDKVGGVGMNGRKLMRLDVEDYDDTKANNRHDPKKPGNGKP