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CmoCh15G011000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G011000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription factor TRY-like
Genome locationCmo_Chr15:7381554..7382314
RNA-Seq ExpressionCmoCh15G011000
SyntenyCmoCh15G011000
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016898876.1 PREDICTED: transcription factor TRY [Cucumis melo]2.6e-3691.46Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        M NHR QK AK+ PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

XP_022922339.1 transcription factor TRY-like [Cucurbita moschata]1.3e-40100Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

XP_022973073.1 transcription factor TRY-like [Cucurbita maxima]1.9e-3997.56Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        M+NHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

XP_022996343.1 transcription factor TRY-like [Cucurbita maxima]7.4e-3690.24Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        M NHR Q+ AK  PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF +RRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

XP_031742154.1 transcription factor TRY [Cucumis sativus]2.0e-3692.68Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        M NHR QK AK+ PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

TrEMBL top hitse value%identityAlignment
A0A1S4DSB1 transcription factor TRY1.2e-3691.46Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        M NHR QK AK+ PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

A0A5D3C2B2 Transcription factor TRY1.2e-3691.46Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        M NHR QK AK+ PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

A0A6J1E339 transcription factor TRY-like6.3e-41100Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

A0A6J1IC17 transcription factor TRY-like9.2e-4097.56Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        M+NHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

I6NF75 R3 MYB transcription factor9.5e-3792.68Show/hide
Query:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG
        M NHR QK AK+ PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL23.9e-1954.55Show/hide
Query:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR
        R +K +K    ++ EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +    +RR
Subjt:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR

O22059 Transcription factor CPC2.0e-2059.74Show/hide
Query:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR
        R+++ +K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   F  RRR
Subjt:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR

Q84RD1 MYB-like transcription factor ETC21.0e-1965.15Show/hide
Query:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR
        +SEEVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F  +RR
Subjt:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR

Q8GV05 Transcription factor TRY1.8e-2466.23Show/hide
Query:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR
        R++K  K+   +SEEVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGF  +RR
Subjt:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR

Q9M157 MYB-like transcription factor ETC32.5e-1857.53Show/hide
Query:  MSNHRQQKHAKLPPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        M NHR+ K  K   +    SEEVSS  W+ + M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MSNHRQQKHAKLPPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

Arabidopsis top hitse value%identityAlignment
AT2G30420.1 Homeodomain-like superfamily protein7.2e-2165.15Show/hide
Query:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR
        +SEEVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F  +RR
Subjt:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR

AT2G30424.1 Homeodomain-like superfamily protein2.7e-2054.55Show/hide
Query:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR
        R +K +K    ++ EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +    +RR
Subjt:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR

AT2G46410.1 Homeodomain-like superfamily protein1.5e-2159.74Show/hide
Query:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR
        R+++ +K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   F  RRR
Subjt:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR

AT4G01060.3 CAPRICE-like MYB31.8e-1957.53Show/hide
Query:  MSNHRQQKHAKLPPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        M NHR+ K  K   +    SEEVSS  W+ + M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MSNHRQQKHAKLPPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

AT5G53200.1 Homeodomain-like superfamily protein1.3e-2566.23Show/hide
Query:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR
        R++K  K+   +SEEVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGF  +RR
Subjt:  RQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAATCATCGTCAGCAGAAACATGCCAAACTCCCTCCGCTAGAATCTGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCT
TATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTG
AAGGGTTTGGAATAAGAAGAAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ACAGTTTTTCCTAAACTTCTGTCATCCTCAGTTCTCGATCTTCTTCCTGTTTCTGTGCTGCCTCTAATCTTAGAAGAAACATGAGCAATCATCGTCAGCAGAAACATGCC
AAACTCCCTCCGCTAGAATCTGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGA
TAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAATAAGAAGAAGAGGATGAG
AGAGACAGAGAGATATAGGCAGTAAGGGTTCAGTCAAGAAGTCTTTAAAGACTTCTAATGGGTTCTTTCCTTCCTCTTTTGAGGTTTCCCTGAAGAAAAGCATGTCCTAA
TAACTTCAGTGTATTGCAAGTACCCTTCTAAGAACACATGGTATGGAACTAAGCTATTTTTTATCTATCAAATAAC
Protein sequenceShow/hide protein sequence
MSNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGIRRRG