; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G011300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G011300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationCmo_Chr15:7852838..7853741
RNA-Seq ExpressionCmoCh15G011300
SyntenyCmoCh15G011300
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022922171.1 probable polygalacturonase [Cucurbita moschata]1.7e-12782.9Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        RNVIIQ LTILAPVT PNTDGINP           DSCSNTRIEDCYIVSGDDCIAIKSGW+QYGIKFGMPTEDLVIRR+TC SP+S  IALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIEN+  INTQ+AVRIKTARGRGGF+KDIFVRRMFL+ MKY+FWMTGDYK+HADDKFDPSA+PVIKNINY+++VA NV+MSANLAGISGDPFTDIC+
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
        SNVKI LS  PKKLQWNCT++EGFSSDVDPPPCAPLAKAAK GGCDFPED+LPIE V+LKSCS+EIP F
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF

XP_022922172.1 probable polygalacturonase [Cucurbita moschata]2.3e-13286.62Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        R+VIIQ LTILAPVTEPNTDGINP           DSCSNTRIEDCYIVSGDDCIAIKSGW+QYGIKFGMPTEDL+IRR+TC SP+S  IALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIEN+  INTQAAVRIKTARGRGGF+KDIFVRRMFL+ MKY+FWMTGDYKAHADDKFDP ALP+IKNINY+++VA NV+MSANLAGISGDPFTDICI
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
        SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAK GGCDFPEDQLPIEKVQLKSCSLEIP F
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF

XP_022922359.1 probable polygalacturonase [Cucurbita moschata]5.8e-14495.91Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        RNVIIQRLTILAPVTEPNTDGINP           DSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
        SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF

XP_023550547.1 probable polygalacturonase [Cucurbita pepo subsp. pepo]2.3e-14093.68Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        RNVIIQRLTILAPVTEPNTDGINP           DSCSNTRIEDCYIVSGDDCIAIKSGW+QYGIKFGMPTEDLVIRRVTCTSP+S AIALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIENIAVINTQAAVRIKTARGRGGF+KDIFVRRMFLTRMKYIFWMT DYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
        SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGC FPEDQLPIEKVQLKSCSLEIPVF
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF

XP_023550548.1 probable polygalacturonase [Cucurbita pepo subsp. pepo]2.8e-13086.89Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        RNVIIQ LTILAPVTEPNTDGINP           DSCSNTRIEDCYIVSGDDCIAIKSGW+QYGIKFGMPTEDLVIR +TC SP+S AIALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIEN+  INTQAAVRIKTARGRGGF+KDIFVRRMFL+ MKY+FWMTGDYKAHADDKFDPSALPVIKNINY+++VA NV+MSANLAGISGDPFTDICI
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIP
        SNVKI LSATPKKLQWNCTN+EGFSSDVDP PCAPLAKAAK  GCDFPEDQLPIEKVQLKSCSLEIP
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIP

TrEMBL top hitse value%identityAlignment
A0A6J1E2G9 probable polygalacturonase1.1e-13286.62Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        R+VIIQ LTILAPVTEPNTDGINP           DSCSNTRIEDCYIVSGDDCIAIKSGW+QYGIKFGMPTEDL+IRR+TC SP+S  IALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIEN+  INTQAAVRIKTARGRGGF+KDIFVRRMFL+ MKY+FWMTGDYKAHADDKFDP ALP+IKNINY+++VA NV+MSANLAGISGDPFTDICI
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
        SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAK GGCDFPEDQLPIEKVQLKSCSLEIP F
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF

A0A6J1E359 probable polygalacturonase2.8e-14495.91Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        RNVIIQRLTILAPVTEPNTDGINP           DSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
        SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF

A0A6J1E3E2 probable polygalacturonase8.1e-12882.9Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        RNVIIQ LTILAPVT PNTDGINP           DSCSNTRIEDCYIVSGDDCIAIKSGW+QYGIKFGMPTEDLVIRR+TC SP+S  IALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIEN+  INTQ+AVRIKTARGRGGF+KDIFVRRMFL+ MKY+FWMTGDYK+HADDKFDPSA+PVIKNINY+++VA NV+MSANLAGISGDPFTDIC+
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
        SNVKI LS  PKKLQWNCT++EGFSSDVDPPPCAPLAKAAK GGCDFPED+LPIE V+LKSCS+EIP F
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF

A0A6J1E7Y4 probable polygalacturonase5.3e-12782.53Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        RNVIIQ LTILAPVT PNTDGINP           DSCSN RIEDCYIVSGDDCIAIKSGW+QYGIKFGMPTEDLVIRR+TC SP+S  IALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIEN+  INTQ+AVRIKTARGRGGF+KDIFVRRMFL+ MKY+FWMTGDYK+HADDKFDPSALPVIKNINY+++VA NV+MSANLAGISGDPFTDIC+
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
        SNVKI LS  PKKLQWNCT++EGFSSDVDPPPCAPLAKA K GGCDFPED+LPIE V+LKSCS+EIP F
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF

A0A6J1E7Z5 probable polygalacturonase1.1e-12783.27Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI
        RNVII  LTILAPVT PNTDGINP           DSCSNTR EDCYIVSGDDCIAIKSGW+QYGIKFGMPTEDLVIRR+TC SP+S  IALGSEMSGGI
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGI

Query:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI
        RNVRIEN+  INTQ+AVRIKTARGRGGF+KDIFVRRMFL+ MKY+FW+TGDYK+HADDKFDPSALP+IKNINY+++VA NV+MSANLAGISGDPFTDIC+
Subjt:  RNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICI

Query:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF
        SNVKI LSATPKKLQWNCTNIEGF SDVDPPPCAPLAKAAK GGCDFPEDQLPIE VQLKSC +EIP F
Subjt:  SNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF

SwissProt top hitse value%identityAlignment
A7PZL3 Probable polygalacturonase1.1e-8956.69Show/hide
Query:  LFIFNLVRWKL-----RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTS
        L + N   W +     RN++IQ +TILAPV  PNTDGINP           DSC+NTRIEDCYIVSGDDC+A+KSGW++YGI +GMPT+ LVIRR+TC S
Subjt:  LFIFNLVRWKL-----RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTS

Query:  PNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMS
        P S  IALGSEMSGGI++VR E+I  IN+++ +RIKT  GRGG++KDI+VR M +  MK+ FWMTG+Y +HAD+ +DP A PVI+ INY+++VA NVSM+
Subjt:  PNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMS

Query:  ANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAA--KRGGCDFPEDQLPIEKVQLKSCSLEI
        A L GI  DPFT ICISNV I L+A  KK+ W CT++EG SS V P PC+ L      K   C+FP + LPI+ V+L+ CS  I
Subjt:  ANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAA--KRGGCDFPEDQLPIEKVQLKSCSLEI

P27644 Polygalacturonase4.4e-1434.16Show/hide
Query:  TILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTED-------LVIRRVTCTSPNSTAIALGSEMSGGIR
        TI+AP   PNTDG NP           +SC N  I       GDDCIA+K+G      K G   ED        +  R     P    + +GSEMSGG+ 
Subjt:  TILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTED-------LVIRRVTCTSPNSTAIALGSEMSGGIR

Query:  NVRIENIAVINTQAAVRIKT-ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFD
        +V +E+  +I T   +R+KT AR  GG + +I +RR+ L  ++        Y   AD   D
Subjt:  NVRIENIAVINTQAAVRIKT-ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFD

Q7M1E7 Polygalacturonase1.5e-0927.13Show/hide
Query:  FNLVRWKLRNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAI-A
        F+LV  +   V IQ L I AP   PNTDGI+             +     IE C I +GDDCIAI +G           + ++ I+ + C   +  +I +
Subjt:  FNLVRWKLRNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAI-A

Query:  LGSEMS-GGIRNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSA-NLAG
        LG + S   + +V +     I+TQ  +RIKT +G  G    I    + +   +    +   Y   A    +  +   I+ + YK +   + + +A  L  
Subjt:  LGSEMS-GGIRNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSA-NLAG

Query:  ISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPL
            P T I +SNV ++L+ + K       N  GF S    P C  L
Subjt:  ISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPL

Q8RY29 Polygalacturonase ADPG23.9e-1025.63Show/hide
Query:  KLRNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAI-ALGSEMS
        K  NV +  + + AP   PNTDGI+             +  N R+ +  I +GDDCI+I+SG           ++++ I  +TC   +  +I +LG + S
Subjt:  KLRNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAI-ALGSEMS

Query:  GG-IRNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGD-PF
           +  V ++   +  T   VRIKT +G  G   +I  + + +  +K    +  DY   +    + SA+ V KN+ Y+++   + S +A     S + P 
Subjt:  GG-IRNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGD-PF

Query:  TDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPC
          I +  V I      K  +  CTN          P C
Subjt:  TDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPC

Q9SFB7 Polygalacturonase QRT24.3e-0924.24Show/hide
Query:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAI-ALGSEMSGG
        +NV    L + +P   PNTDGI+                N  I+D  + +GDDCI+I SG           +E++    +TC   +  +I +LG + S  
Subjt:  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAI-ALGSEMSGG

Query:  -IRNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKEL-------VAMNVSMSANLAGIS
         + NV +    +I T   VRIKT +G  G  K+I  + + +  +     +  DY    +   +  +   + N+ YK +       +A+    S N+    
Subjt:  -IRNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKEL-------VAMNVSMSANLAGIS

Query:  GDPFTDICISNVKIELSATPKKLQWNCTNIE
          P   I + NVK+         + +C+N++
Subjt:  GDPFTDICISNVKIELSATPKKLQWNCTNIE

Arabidopsis top hitse value%identityAlignment
AT2G23900.1 Pectin lyase-like superfamily protein1.3e-9059.16Show/hide
Query:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR
        NVI++ +TILAP+  PNTDGINP           DSC+NT IEDCY+VSGDDCIA+KSGW+Q+GIK GMPT+ L IRR+TC SP+S  IALGSEMSGGI+
Subjt:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR

Query:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS
        +VRIE+I ++ TQ+A+RIKTA GRGG++KDIF RR  +  MKY+FWM+G Y  H    FDP A+PVI NINY+++ A NV+  A L G   DPFT IC+S
Subjt:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS

Query:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCS
        N+KI+L+A PKKL WNCT+I G SS V P PC+ L +      C FP D++PIE V L  CS
Subjt:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCS

AT3G48950.1 Pectin lyase-like superfamily protein7.1e-9260.53Show/hide
Query:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR
        +VI++ +T+LAPVT PNTDGINP           DSC+NT IEDCYIVSGDDCIA+KSGW+QYGIKFGMPT+ L IRR+TC SP S  +ALGSEMSGGI+
Subjt:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR

Query:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS
        +VRIE++ + NT++A+RIKTA GRG ++KDI+ RR+ +  MKY+FWM+G+Y +H D+ FDP ALP I NINY+++ A NV+MSA+L GI  DPFT ICIS
Subjt:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS

Query:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCA--PLAKA-AKRGGCDFPEDQLPIEKVQLKSCSL
        NV I L+A  KK+QWNCT++ G +S V P PC+  P  KA AK   C FP D +PIE V LK C L
Subjt:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCA--PLAKA-AKRGGCDFPEDQLPIEKVQLKSCSL

AT3G61490.1 Pectin lyase-like superfamily protein2.3e-9058.61Show/hide
Query:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR
        N+I++ +TI+APV  PNTDGINP           DSC+NTRIEDCYI+SGDDCIA+KSGW++YGI FGMPT+ LVIRR+TC SP S AIALGSEMSGGI 
Subjt:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR

Query:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS
        +VR E+I    T++ VRIKTA GRG F+K+I+V+ M L  MK++FWMTG+YKAHAD  +DP ALP I  INY+++VA NVSM+  L GISGDPFT ICIS
Subjt:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS

Query:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPL----AKAAKR----GGCDFPEDQLPIEKVQLKSCSLEI
        N  I ++A  KK  W C+++EG +S VDP PC  L    ++  K+    GGCDFP D L I+ V+LK+CS ++
Subjt:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPL----AKAAKR----GGCDFPEDQLPIEKVQLKSCSLEI

AT3G61490.2 Pectin lyase-like superfamily protein2.3e-9058.61Show/hide
Query:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR
        N+I++ +TI+APV  PNTDGINP           DSC+NTRIEDCYI+SGDDCIA+KSGW++YGI FGMPT+ LVIRR+TC SP S AIALGSEMSGGI 
Subjt:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR

Query:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS
        +VR E+I    T++ VRIKTA GRG F+K+I+V+ M L  MK++FWMTG+YKAHAD  +DP ALP I  INY+++VA NVSM+  L GISGDPFT ICIS
Subjt:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS

Query:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPL----AKAAKR----GGCDFPEDQLPIEKVQLKSCSLEI
        N  I ++A  KK  W C+++EG +S VDP PC  L    ++  K+    GGCDFP D L I+ V+LK+CS ++
Subjt:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPL----AKAAKR----GGCDFPEDQLPIEKVQLKSCSLEI

AT4G23500.1 Pectin lyase-like superfamily protein2.0e-9461.89Show/hide
Query:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR
        N+ IQ LTILAPVT PNTDGINP           DSC+NTRIEDCYIVSGDDCIA+KSGW+QYGI +GMPT+ L+IRR+TC SP+S  IALGSEMSGGI 
Subjt:  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIR

Query:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS
        +VR E+I  IN+++ +RIKTA GRGG++KD++VR M +  MKY+FWMTG Y +H DD +DP ALPVI+NINY+++VA NV+M A LAGISGD FT ICIS
Subjt:  NVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPFTDICIS

Query:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGG----CDFPEDQLPIEKVQLKSC
        NV I LS  PKK+ WNCT++ G++S V P PC  L +  K+ G    C+FPED +PI++V+L+ C
Subjt:  NVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGG----CDFPEDQLPIEKVQLKSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTATTATTATTTATTTTTAATTTGGTTCGATGGAAACTCAGAAATGTGATTATCCAAAGGCTCACAATCCTGGCTCCAGTCACCGAACCTAACACGGAC
GGAATCAATCCAGTCCCTCTCCCTAATTCTCCATTCAATTTATCAGATTCCTGTTCCAACACTCGAATCGAAGACTGCTACATTGTCTCCGGTGACGATTGCATT
GCCATCAAGAGCGGGTGGAACCAATACGGTATCAAGTTCGGAATGCCAACCGAGGACCTCGTCATTCGCCGCGTCACTTGTACTTCACCAAATTCCACAGCTATC
GCCCTTGGTAGCGAAATGTCTGGCGGAATCCGCAATGTCAGGATCGAAAACATCGCTGTAATCAACACACAGGCTGCCGTCAGAATCAAAACTGCTCGCGGACGA
GGTGGTTTCATCAAGGACATTTTCGTTCGAAGAATGTTTCTAACCAGGATGAAGTACATCTTTTGGATGACTGGAGACTATAAAGCTCATGCAGATGACAAGTTC
GATCCCTCAGCATTGCCAGTGATTAAGAACATTAATTACAAAGAGTTGGTGGCCATGAATGTTAGTATGTCAGCAAATTTGGCTGGAATTTCAGGAGATCCGTTT
ACAGATATATGTATTTCGAATGTGAAGATTGAATTGTCGGCGACGCCTAAAAAGTTGCAGTGGAACTGTACGAACATTGAGGGATTTAGTAGCGATGTGGATCCG
CCGCCATGTGCTCCGCTGGCTAAGGCAGCAAAAAGAGGTGGATGTGACTTTCCTGAGGATCAGCTGCCGATTGAGAAGGTTCAATTGAAGTCATGTTCTCTTGAA
ATTCCTGTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTTATTATTATTTATTTTTAATTTGGTTCGATGGAAACTCAGAAATGTGATTATCCAAAGGCTCACAATCCTGGCTCCAGTCACCGAACCTAACACGGAC
GGAATCAATCCAGTCCCTCTCCCTAATTCTCCATTCAATTTATCAGATTCCTGTTCCAACACTCGAATCGAAGACTGCTACATTGTCTCCGGTGACGATTGCATT
GCCATCAAGAGCGGGTGGAACCAATACGGTATCAAGTTCGGAATGCCAACCGAGGACCTCGTCATTCGCCGCGTCACTTGTACTTCACCAAATTCCACAGCTATC
GCCCTTGGTAGCGAAATGTCTGGCGGAATCCGCAATGTCAGGATCGAAAACATCGCTGTAATCAACACACAGGCTGCCGTCAGAATCAAAACTGCTCGCGGACGA
GGTGGTTTCATCAAGGACATTTTCGTTCGAAGAATGTTTCTAACCAGGATGAAGTACATCTTTTGGATGACTGGAGACTATAAAGCTCATGCAGATGACAAGTTC
GATCCCTCAGCATTGCCAGTGATTAAGAACATTAATTACAAAGAGTTGGTGGCCATGAATGTTAGTATGTCAGCAAATTTGGCTGGAATTTCAGGAGATCCGTTT
ACAGATATATGTATTTCGAATGTGAAGATTGAATTGTCGGCGACGCCTAAAAAGTTGCAGTGGAACTGTACGAACATTGAGGGATTTAGTAGCGATGTGGATCCG
CCGCCATGTGCTCCGCTGGCTAAGGCAGCAAAAAGAGGTGGATGTGACTTTCCTGAGGATCAGCTGCCGATTGAGAAGGTTCAATTGAAGTCATGTTCTCTTGAA
ATTCCTGTCTTCTAG
Protein sequenceShow/hide protein sequence
MILLLFIFNLVRWKLRNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAI
ALGSEMSGGIRNVRIENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNVSMSANLAGISGDPF
TDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAKRGGCDFPEDQLPIEKVQLKSCSLEIPVF