CuGenDBv2

Gene ID	CmoCh15G011340
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Pectin lyase-like superfamily protein
Genome location	Cmo_Chr15:7883841..7885751
RNA-Seq Expression	CmoCh15G011340
Synteny	CmoCh15G011340
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0004650 - polygalacturonase activity (molecular function)
InterPro domains	IPR000743 - Glycoside hydrolase, family 28 IPR011050 - Pectin lyase fold/virulence factor IPR012334 - Pectin lyase fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022922170.1 probable polygalacturonase [Cucurbita moschata]

3.5e-111

100

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
        NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF

XP_022922171.1 probable polygalacturonase [Cucurbita moschata]

6.5e-110

98.5

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSA+PVIK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
        NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKA K+GGCDFPEDKLPIENVELKSCSVEIPAF
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF

XP_022972957.1 probable polygalacturonase [Cucurbita maxima]

9.4e-109

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTE LVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
        NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKA K+GGCDFPEDKLPIENV+LKSCSVEIPAF
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF

XP_023520463.1 probable polygalacturonase [Cucurbita pepo subsp. pepo]

4.0e-107

96.98

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENV AINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPA
        NINYRDVVAENVNMSANLAGISGDPFTDIC+SNVKIGLSKKPKKLQWNCT+VEGFSSDVDPPPCAPLAKA K+GGCDFPEDKLPIENV+LKSCSVEIPA
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPA

XP_023550020.1 probable polygalacturonase [Cucurbita pepo subsp. pepo]

1.6e-108

98.48

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIP
        NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKA K+GGCDFPEDKLPIENV+LKSCSVEIP
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1E3E2 probable polygalacturonase

3.2e-110

98.5

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSA+PVIK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
        NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKA K+GGCDFPEDKLPIENVELKSCSVEIPAF
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF

A0A6J1E7Y4 probable polygalacturonase

1.7e-111

100

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
        NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF

A0A6J1E7Z5 probable polygalacturonase

1.5e-104

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFW+TGDYKSHADDKFDPSALP+IK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
        NINYRDVVAENVNMSANLAGISGDPFTDIC+SNVKIGLS  PKKLQWNCT++EGF SDVDPPPCAPLAKA K+GGCDFPED+LPIENV+LKSC VEIP F
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF

A0A6J1I677 probable polygalacturonase

4.6e-109

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTE LVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
        NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKA K+GGCDFPEDKLPIENV+LKSCSVEIPAF
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF

A0A6J1IBV8 probable polygalacturonase

1.2e-104

92.5

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPTE+LV+RRLTCISPDSAGIALGSEMSGGIRN+RIENVTAINT+SAVRIKTARGRGG+VKDIFVRRMFL+TMKYVFWMTGDYKSHADDKFDPSALPVIK
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF
        NINYRDVVAENV MSANLAGISGD FTDIC+SNVKIGLS KPKK+QWNCTD+EGFSSDVDPPPCAPLAKA K+GGCDFPEDKLPIENV+LKSCSVEIPAF
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF

SwissProt top hits

e value

%identity

Alignment

A7PZL3 Probable polygalacturonase

1.6e-66

62.31

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPT+ LVIRRLTCISP SA IALGSEMSGGI++VR E++ AIN++S +RIKT  GRGG+VKDI+VR M + TMK+ FWMTG+Y SHAD+ +DP A PVI+
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAK--AVKNGGCDFPEDKLPIENVELKSCSVEI
         INYRD+VAENV+M+A L GI  DPFT IC+SNV I L+ K KK+ W CTDVEG SS V P PC+ L      K   C+FP + LPI+ VEL+ CS  I
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAK--AVKNGGCDFPEDKLPIENVELKSCSVEI

P27644 Polygalacturonase

8.3e-07

31.09

Show/hide

Query:  ISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKT-ARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFD----------PSALPVIKNI
        + P   G+ +GSEMSGG+ +V +E+   I T   +R+KT AR  GG V +I +RR+ L  ++        Y   AD   D              P +  I
Subjt:  ISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKT-ARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFD----------PSALPVIKNI

Query:  NYRDVVAENVNMSANLAGI
           DV   N+   A+ AG+
Subjt:  NYRDVVAENVNMSANLAGI

Arabidopsis top hits

e value

%identity

Alignment

AT2G23900.1 Pectin lyase-like superfamily protein

3.5e-69

63.4

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPT+ L IRRLTCISPDSAGIALGSEMSGGI++VRIE++T + TQSA+RIKTA GRGG+VKDIF RR  + TMKYVFWM+G Y  H    FDP A+PVI 
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCS
        NINYRD+ A+NV   A L G   DPFT ICMSN+KI L+ +PKKL WNCT + G SS V P PC+ L +      C FP DK+PIE+V L  CS
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCS

AT3G48950.1 Pectin lyase-like superfamily protein

5.4e-70

65.82

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPT+ L IRRLTCISP SAG+ALGSEMSGGI++VRIE+VT  NT+SA+RIKTA GRG +VKDI+ RR+ + TMKYVFWM+G+Y SH D+ FDP ALP I 
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCA--PLAKA-VKNGGCDFPEDKLPIENVELKSC
        NINYRD+ AENV MSA+L GI  DPFT IC+SNV I L+ K KK+QWNCTDV G +S V P PC+  P  KA  KN  C FP D +PIE+V LK C
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCA--PLAKA-VKNGGCDFPEDKLPIENVELKSC

AT3G61490.1 Pectin lyase-like superfamily protein

7.8e-69

62.44

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPT+ LVIRRLTCISP SA IALGSEMSGGI +VR E++TA  T+S VRIKTA GRG FVK+I+V+ M L TMK+VFWMTG+YK+HAD  +DP ALP I 
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPL--------AKAVKNGGCDFPEDKLPIENVELKS
         INYRD+VAENV+M+  L GISGDPFT IC+SN  I ++ K KK  W C+DVEG +S VDP PC  L         K + +GGCDFP D L I+NVELK+
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPL--------AKAVKNGGCDFPEDKLPIENVELKS

Query:  CSVEI
        CS ++
Subjt:  CSVEI

AT3G61490.2 Pectin lyase-like superfamily protein

7.8e-69

62.44

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPT+ LVIRRLTCISP SA IALGSEMSGGI +VR E++TA  T+S VRIKTA GRG FVK+I+V+ M L TMK+VFWMTG+YK+HAD  +DP ALP I 
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPL--------AKAVKNGGCDFPEDKLPIENVELKS
         INYRD+VAENV+M+  L GISGDPFT IC+SN  I ++ K KK  W C+DVEG +S VDP PC  L         K + +GGCDFP D L I+NVELK+
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPL--------AKAVKNGGCDFPEDKLPIENVELKS

Query:  CSVEI
        CS ++
Subjt:  CSVEI

AT4G23500.1 Pectin lyase-like superfamily protein

1.7e-71

65.99

Show/hide

Query:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK
        MPT+ L+IRRLTCISPDSA IALGSEMSGGI +VR E++ AIN++S +RIKTA GRGG+VKD++VR M + TMKYVFWMTG Y SH DD +DP ALPVI+
Subjt:  MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIK

Query:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGG----CDFPEDKLPIENVELKSC
        NINY+D+VAENV M A LAGISGD FT IC+SNV I LSKKPKK+ WNCTDV G++S V P PC  L +  K  G    C+FPED +PI+ V+L+ C
Subjt:  NINYRDVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGG----CDFPEDKLPIENVELKSC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCGACCGAAGACCTTGTCATTCGCCGCCTCACTTGCATCTCACCAGATTCTGCAGGTATCGCCCTTGGTAGCGAAATGTCTGGCGGAATTCGCAACGTCAGG
ATCGAAAACGTCACTGCAATCAATACACAGTCTGCTGTCAGAATCAAAACTGCTCGCGGACGAGGTGGTTTCGTCAAGGACATTTTCGTCCGAAGAATGTTTCTA
TCCACGATGAAATACGTCTTCTGGATGACTGGAGACTACAAATCGCATGCAGATGACAAGTTTGATCCCTCGGCATTGCCAGTGATTAAGAACATTAATTATAGA
GACGTGGTTGCTGAGAATGTTAATATGTCAGCAAATTTGGCAGGGATATCGGGAGATCCATTCACGGATATTTGTATGTCGAATGTAAAGATTGGATTGTCGAAG
AAGCCTAAAAAGTTGCAGTGGAACTGTACGGATGTTGAGGGATTTAGTAGCGATGTGGATCCGCCGCCATGTGCTCCACTGGCTAAAGCAGTGAAAAACGGTGGA
TGTGACTTTCCCGAGGACAAGCTGCCAATTGAGAATGTTGAGCTGAAGTCATGCTCCGTTGAAATTCCTGCCTTTTAA

mRNA sequence

Show/hide mRNA sequence

ATGAATCCGCGTCTAAGTTCGAACACTCTGAAATTTCAGGCCATCAATTGTCGGAAACACTCGGCGTTGCTGACGGAGTTTGGCGGTGTCGGCGACGGAGTAACT
TCAAATACTAACGCGTTCCGAAAAGCGATTGAACATCTTAGCACACTTGCGGCGGATGGTGGTGCTCAATTGATCGTGCCGCCGGGGAAATGGCTGACCGGAAGT
TTTAATCTGACTAGCCATTTCACACTTTTTATCGATAAAGAAGCAAAAATTCTTGCATCCCAGAAAGAATCAGAGTGGCCACTTGTGGAAGTTCTCCCATCTTAT
GGGAGGGGAAGAGAGGCTCCGGGTGGACGGTACAACAGCCTCATTTTTGGAACTAATCTCACCGATGTGGTTATCACAGGTAACAATGGTACAATCCACGGGCAA
GGATCTTCTTGGTGGGAAAAATTTAAGAAAGGGGAGCTCAAGGTAACACGACCGCATGTGATCGAGATCATGTACTCTGATCAAATCCAAATCTCCGATCTCACT
TTGATCAACTCACCTTTTTGAAATGTGATTATCCAAGGGCTCACCATCTTAGCTCCCGTCACCGTACCCAACACTGACGGAATCAATCCAGATTCTTGTTCCAAC
ATTCGAATCGAAGACTGCTACATTGTCTCCGGTGACGATTGCATCGCCATCAAGAGCGGATGGGACCAATATGGTATCAAGTTCGGAATGCCGACCGAAGACCTT
GTCATTCGCCGCCTCACTTGCATCTCACCAGATTCTGCAGGTATCGCCCTTGGTAGCGAAATGTCTGGCGGAATTCGCAACGTCAGGATCGAAAACGTCACTGCA
ATCAATACACAGTCTGCTGTCAGAATCAAAACTGCTCGCGGACGAGGTGGTTTCGTCAAGGACATTTTCGTCCGAAGAATGTTTCTATCCACGATGAAATACGTC
TTCTGGATGACTGGAGACTACAAATCGCATGCAGATGACAAGTTTGATCCCTCGGCATTGCCAGTGATTAAGAACATTAATTATAGAGACGTGGTTGCTGAGAAT
GTTAATATGTCAGCAAATTTGGCAGGGATATCGGGAGATCCATTCACGGATATTTGTATGTCGAATGTAAAGATTGGATTGTCGAAGAAGCCTAAAAAGTTGCAG
TGGAACTGTACGGATGTTGAGGGATTTAGTAGCGATGTGGATCCGCCGCCATGTGCTCCACTGGCTAAAGCAGTGAAAAACGGTGGATGTGACTTTCCCGAGGAC
AAGCTGCCAATTGAGAATGTTGAGCTGAAGTCATGCTCCGTTGAAATTCCTGCCTTTTAA

Protein sequence

Show/hide protein sequence

MPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINTQSAVRIKTARGRGGFVKDIFVRRMFLSTMKYVFWMTGDYKSHADDKFDPSALPVIKNINYR
DVVAENVNMSANLAGISGDPFTDICMSNVKIGLSKKPKKLQWNCTDVEGFSSDVDPPPCAPLAKAVKNGGCDFPEDKLPIENVELKSCSVEIPAF

CmoCh15G011340 (gene) of Cucurbita moschata (Rifu) v1 genome