; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G012100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G012100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionthylakoid lumenal protein TL20.3, chloroplastic isoform X1
Genome locationCmo_Chr15:8389329..8392631
RNA-Seq ExpressionCmoCh15G012100
SyntenyCmoCh15G012100
Gene Ontology termsNA
InterPro domainsIPR001646 - Pentapeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022922204.1 thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Cucurbita moschata]6.3e-151100Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
        MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT

Query:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
        RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
Subjt:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA

Query:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
Subjt:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

XP_022922205.1 thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita moschata]2.5e-14798.94Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
        MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQ   DCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT

Query:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
        RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
Subjt:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA

Query:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
Subjt:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

XP_022969873.1 thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Cucurbita maxima]5.5e-14798.23Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
        MALSSVSSLSLKCLPSSSSKSKVPSSLQPRK FSIVSQVNLQK QTQGE+DCSERKHIGKISEPKRWQK VSTALAAAAVISFSSGMPSIAELNKYEADT
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT

Query:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
        RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
Subjt:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA

Query:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEA+K
Subjt:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

XP_023550714.1 thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]2.4e-15099.65Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
        MALSSVSSLSLKCLPSSSSKSKVPSSLQPRK FSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT

Query:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
        RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
Subjt:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA

Query:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
Subjt:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

XP_023550716.1 thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]9.4e-14798.58Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
        MALSSVSSLSLKCLPSSSSKSKVPSSLQPRK FSIVSQVNLQKDQTQ   DCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT

Query:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
        RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
Subjt:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA

Query:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
Subjt:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

TrEMBL top hitse value%identityAlignment
A0A1S3ATE2 thylakoid lumenal protein TL20.3, chloroplastic8.1e-13691.2Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERK--HIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEA
        MALSS+SSLS KCLP +SSKSK PSSLQPRK  S VSQ+N QKDQTQ   DCSERK  HIGKI+EPKRWQK VSTALAAAAVI FSSGMPS+AELNKYEA
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERK--HIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEA

Query:  DTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLG
        DTRGEFGIGSAAQ+GSADLRKAVH+NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN TNAVLVRSVLTRSDLG
Subjt:  DTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLG

Query:  GATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        GA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLL+RDGFCD+GTGLCEATK
Subjt:  GATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

A0A6J1E2Q9 thylakoid lumenal protein TL20.3, chloroplastic isoform X13.1e-151100Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
        MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT

Query:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
        RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
Subjt:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA

Query:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
Subjt:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

A0A6J1E828 thylakoid lumenal protein TL20.3, chloroplastic isoform X21.2e-14798.94Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
        MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQ   DCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT

Query:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
        RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
Subjt:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA

Query:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
Subjt:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

A0A6J1I174 thylakoid lumenal protein TL20.3, chloroplastic isoform X22.8e-14497.52Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
        MALSSVSSLSLKCLPSSSSKSKVPSSLQPRK FSIVSQVNLQK QTQ   DCSERKHIGKISEPKRWQK VSTALAAAAVISFSSGMPSIAELNKYEADT
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT

Query:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
        RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
Subjt:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA

Query:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEA+K
Subjt:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

A0A6J1I279 thylakoid lumenal protein TL20.3, chloroplastic isoform X12.7e-14798.23Show/hide
Query:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT
        MALSSVSSLSLKCLPSSSSKSKVPSSLQPRK FSIVSQVNLQK QTQGE+DCSERKHIGKISEPKRWQK VSTALAAAAVISFSSGMPSIAELNKYEADT
Subjt:  MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADT

Query:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
        RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA
Subjt:  RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA

Query:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK
        TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEA+K
Subjt:  TIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK

SwissProt top hitse value%identityAlignment
B1WVN5 Pentapeptide repeat protein Rfr321.6e-1639.26Show/hide
Query:  GSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGAD
        GS+A +    L       ++   A FT+AD+ +S+FS     GA    +     +  GADL++ L        A+LTNAVL  +++ R+    A I GAD
Subjt:  GSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGAD

Query:  FSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC
        FS AV+D+ +   LC  A G NP TGVSTR SLGC
Subjt:  FSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC

P81760 Thylakoid lumenal 17.4 kDa protein, chloroplastic9.2e-0424.86Show/hide
Query:  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLS
        T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N +    ++A M  + F G       + KA A + +F G + +
Subjt:  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLS

Query:  DTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC
        + ++DR+   ++NL  AV   +VL+ S    A +    F D +I     Q +C+     N       R  LGC
Subjt:  DTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC

Q52118 Uncharacterized protein in mobD 3'region3.7e-0534.62Show/hide
Query:  SAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKA---VAY--KTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATI
        S A   +ADL++A   N N   A+ T+A++ ++D      +GA L  A   +AY  + + S A+LS+  + R  L++ANL++A L    L R+DL  A +
Subjt:  SAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKA---VAY--KTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATI

Query:  VGAD
         GA+
Subjt:  VGAD

Q55837 Uncharacterized protein slr05166.4e-0536.36Show/hide
Query:  NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN-----LTNAVLVRSVLTRSDLGGATIVGADFS
        + R  N  +A +  SD SG   +G  L +A+  + N +GA+LS+T +    L EAN     L+ A L RS L   DL GA + GA+ +
Subjt:  NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN-----LTNAVLVRSVLTRSDLGGATIVGADFS

Q8H1Q1 Thylakoid lumenal protein TL20.3, chloroplastic2.2e-9871.23Show/hide
Query:  MALSSVSSLSLKCLP---SSSSKSKVPSSLQP--RKSFSIVSQVNLQ-KDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELN
        MA SS+S L +K L    SSSS S+ P   Q    +   + S+ NL+ KD +     C         +E   W++ +S A+ AAAVI+ SSG+P++AELN
Subjt:  MALSSVSSLSLKCLP---SSSSKSKVPSSLQP--RKSFSIVSQVNLQ-KDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELN

Query:  KYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTR
        ++EADTRGEFGIGSAAQ+GSADL K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTR
Subjt:  KYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTR

Query:  SDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCE
        SDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV TR SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCDE TGLC+
Subjt:  SDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCE

Arabidopsis top hitse value%identityAlignment
AT1G12250.1 Pentapeptide repeat-containing protein1.6e-9971.23Show/hide
Query:  MALSSVSSLSLKCLP---SSSSKSKVPSSLQP--RKSFSIVSQVNLQ-KDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELN
        MA SS+S L +K L    SSSS S+ P   Q    +   + S+ NL+ KD +     C         +E   W++ +S A+ AAAVI+ SSG+P++AELN
Subjt:  MALSSVSSLSLKCLP---SSSSKSKVPSSLQP--RKSFSIVSQVNLQ-KDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELN

Query:  KYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTR
        ++EADTRGEFGIGSAAQ+GSADL K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTR
Subjt:  KYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTR

Query:  SDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCE
        SDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV TR SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCDE TGLC+
Subjt:  SDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCE

AT1G12250.2 Pentapeptide repeat-containing protein5.6e-9787.68Show/hide
Query:  AAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMV
        AAAVI+ SSG+P++AELN++EADTRGEFGIGSAAQ+GSADL K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMV
Subjt:  AAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMV

Query:  LNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTG
        LNEANLTNAVLVRSVLTRSDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV TR SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCDE TG
Subjt:  LNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTG

Query:  LCE
        LC+
Subjt:  LCE

AT5G53490.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.6e-0524.86Show/hide
Query:  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLS
        T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N +    ++A M  + F G       + KA A + +F G + +
Subjt:  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLS

Query:  DTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC
        + ++DR+   ++NL  AV   +VL+ S    A +    F D +I     Q +C+     N       R  LGC
Subjt:  DTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC

AT5G53490.2 Tetratricopeptide repeat (TPR)-like superfamily protein6.6e-0524.86Show/hide
Query:  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLS
        T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N +    ++A M  + F G       + KA A + +F G + +
Subjt:  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLS

Query:  DTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC
        + ++DR+   ++NL  AV   +VL+ S    A +    F D +I     Q +C+     N       R  LGC
Subjt:  DTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC

AT5G53490.3 Tetratricopeptide repeat (TPR)-like superfamily protein6.6e-0524.86Show/hide
Query:  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLS
        T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N +    ++A M  + F G       + KA A + +F G + +
Subjt:  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLS

Query:  DTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC
        + ++DR+   ++NL  AV   +VL+ S    A +    F D +I     Q +C+     N       R  LGC
Subjt:  DTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTTCTTCTGTTTCCTCACTCTCACTAAAATGTCTACCCTCATCTTCCTCTAAATCAAAGGTTCCGAGTTCTCTACAACCCAGAAAATCATTTTCCATTGTCTC
TCAAGTAAACTTACAAAAGGATCAAACTCAAGGTGAGTATGATTGTTCGGAGAGGAAACACATTGGCAAGATTTCAGAGCCAAAGAGATGGCAAAAGTGGGTTTCAACTG
CTTTGGCTGCTGCTGCAGTCATTAGTTTTAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAGGCCGATACGCGTGGCGAATTCGGAATTGGATCCGCTGCT
CAATTTGGTTCTGCAGATCTCAGAAAAGCAGTGCATGTGAACGAAAATTTCAGGAGAGCCAATTTCACATCTGCTGATATGAGAGAATCCGATTTCAGTGGCTGTACATT
CAATGGCGCTTATCTTGAAAAGGCTGTTGCATACAAGACCAATTTCTCTGGCGCAGATTTGAGTGACACATTGATGGATCGTATGGTATTGAATGAAGCAAATCTTACAA
ATGCGGTGTTGGTTCGATCAGTGCTAACACGGAGCGATTTAGGCGGTGCCACTATCGTGGGTGCTGACTTTAGTGATGCTGTCATCGACCTTCCCCAAAAGCAGGCACTT
TGTAAGTATGCGAGTGGGACGAACCCAGTGACGGGAGTGAGCACGAGGGCAAGCTTAGGGTGTGGAAATAGTCGCAGAAATGCATATGGAACACCGTCATCTCCGCTACT
CAGCGCACCGCCGCAACAATTGCTCAATCGTGACGGTTTTTGCGATGAAGGCACTGGTCTTTGTGAAGCCACTAAATAG
mRNA sequenceShow/hide mRNA sequence
TCTGTAATGTAATTGGAAGAACATGACTGGCGAATAAACCCACAAGTGGCTAACCCATTGGCCCCAGAGAACAAGGGAATATGTGTTCAAATCCTATCCAGAGGTCAGAA
GGAAACTGATAAATCTAAAACTTTTCCTCTCCAATCGTTTTCTTTCCCCTGTTTCTCTACTCCTTCCAGCAAAATATTTAACTTTCTTGGCGCAGGAGAAGACCCCAATT
GCAGCCCTTCATGGCACTTTCTTCTGTTTCCTCACTCTCACTAAAATGTCTACCCTCATCTTCCTCTAAATCAAAGGTTCCGAGTTCTCTACAACCCAGAAAATCATTTT
CCATTGTCTCTCAAGTAAACTTACAAAAGGATCAAACTCAAGGTGAGTATGATTGTTCGGAGAGGAAACACATTGGCAAGATTTCAGAGCCAAAGAGATGGCAAAAGTGG
GTTTCAACTGCTTTGGCTGCTGCTGCAGTCATTAGTTTTAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAGGCCGATACGCGTGGCGAATTCGGAATTGG
ATCCGCTGCTCAATTTGGTTCTGCAGATCTCAGAAAAGCAGTGCATGTGAACGAAAATTTCAGGAGAGCCAATTTCACATCTGCTGATATGAGAGAATCCGATTTCAGTG
GCTGTACATTCAATGGCGCTTATCTTGAAAAGGCTGTTGCATACAAGACCAATTTCTCTGGCGCAGATTTGAGTGACACATTGATGGATCGTATGGTATTGAATGAAGCA
AATCTTACAAATGCGGTGTTGGTTCGATCAGTGCTAACACGGAGCGATTTAGGCGGTGCCACTATCGTGGGTGCTGACTTTAGTGATGCTGTCATCGACCTTCCCCAAAA
GCAGGCACTTTGTAAGTATGCGAGTGGGACGAACCCAGTGACGGGAGTGAGCACGAGGGCAAGCTTAGGGTGTGGAAATAGTCGCAGAAATGCATATGGAACACCGTCAT
CTCCGCTACTCAGCGCACCGCCGCAACAATTGCTCAATCGTGACGGTTTTTGCGATGAAGGCACTGGTCTTTGTGAAGCCACTAAATAGATGTATGTATATGTTATAAAT
CTTGTTGTATACTAATCTCAATTTCCCATCTTTTGAACACAAAATAACAAATTCAAGTGCTTTAAGCTTGAGACCAATTAGCATTGGAACTTGAGAACTCTTACGGAGAA
GTGTGGATGGTTCGGTTTTCCGCTGATTAACAAACATATATTATAGAGATTACAGAGCAAG
Protein sequenceShow/hide protein sequence
MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGKISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAA
QFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQAL
CKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK