; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G012330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G012330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCmo_Chr15:8492964..8496355
RNA-Seq ExpressionCmoCh15G012330
SyntenyCmoCh15G012330
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147568.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis sativus]2.7e-9374.79Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQAR------------------------VPDEGTWQWVDLWNAL
        MAV+S   LQPQI VSQPSLSVATKV++GLK QSASPFGGAKPNIT EFYGKVHKSLQ R                         P EG WQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQAR------------------------VPDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG  VDEEFSNQILAT+LYLDS+E SKKLY+YINGPGGDLTP++A+YDTMQSL+SP+ATHC+G AYN+AAFLLAAGEKGNRSAMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P+G+ARG+ADDI+NEAN+LL+IRDYL+DELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

XP_008437161.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo]2.0e-9677.31Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQARV------------------------PDEGTWQWVDLWNAL
        MAVSS    QPQI VSQPSLS  TKV+SGLK QSASPFGG KPNIT EFYGKVHKSLQAR                         P EGTWQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQARV------------------------PDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG N+DEEFSNQILAT+LYLDSIETS+K YMYINGPGGDLTP+MA+YDTMQSL SPVATHCVGYAYN+AAFLLAAGEKGNR AMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P+G+ARGQADDI+NEANELLRIRDYL++ELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

XP_022158384.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia]1.2e-9879.41Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL
        MAVSS+  LQPQI VSQP LS ATK++SGLKLQSA PFGGAKPN+T EFYGKVHKSL +                        R P EGTWQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG N+DEEFSNQILAT+LYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSL+SPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P+GAARGQADDI+NEANELLRIRDYL+DELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

XP_022957748.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucurbita moschata]1.0e-9275.63Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL
        MA SS    QPQI  SQ  LS ATKV+SGLKLQSASPFGGAKPN+T EFYGKVHKSLQ+                        R P EGTWQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG N+DEEFSNQILAT+LYLDSIE+SK LYMYINGPGGDLTPS+AIYDTMQSL+S V THCVGYAY+LAAFLLAAGEKG+R+AMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P GAARGQADD+RNEANELLRIRDYL++ELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

XP_038906920.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Benincasa hispida]1.1e-9980.67Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL
        MAVSS   LQPQI VSQP LS  TKV+SGLK QSASPFGGAKPN+T EFYGKVHKSLQA                        R P EGTWQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG N+DEEFSNQILAT+LYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSL+SPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P+GAARGQADDI+NEANELLRIRDYLYDELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

TrEMBL top hitse value%identityAlignment
A0A0A0KKQ7 ATP-dependent Clp protease proteolytic subunit1.3e-9374.79Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQAR------------------------VPDEGTWQWVDLWNAL
        MAV+S   LQPQI VSQPSLSVATKV++GLK QSASPFGGAKPNIT EFYGKVHKSLQ R                         P EG WQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQAR------------------------VPDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG  VDEEFSNQILAT+LYLDS+E SKKLY+YINGPGGDLTP++A+YDTMQSL+SP+ATHC+G AYN+AAFLLAAGEKGNRSAMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P+G+ARG+ADDI+NEAN+LL+IRDYL+DELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

A0A1S3ATH1 ATP-dependent Clp protease proteolytic subunit9.6e-9777.31Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQARV------------------------PDEGTWQWVDLWNAL
        MAVSS    QPQI VSQPSLS  TKV+SGLK QSASPFGG KPNIT EFYGKVHKSLQAR                         P EGTWQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQARV------------------------PDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG N+DEEFSNQILAT+LYLDSIETS+K YMYINGPGGDLTP+MA+YDTMQSL SPVATHCVGYAYN+AAFLLAAGEKGNR AMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P+G+ARGQADDI+NEANELLRIRDYL++ELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

A0A6J1DZ88 ATP-dependent Clp protease proteolytic subunit6.0e-9979.41Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL
        MAVSS+  LQPQI VSQP LS ATK++SGLKLQSA PFGGAKPN+T EFYGKVHKSL +                        R P EGTWQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG N+DEEFSNQILAT+LYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSL+SPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P+GAARGQADDI+NEANELLRIRDYL+DELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

A0A6J1H153 ATP-dependent Clp protease proteolytic subunit4.9e-9375.63Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL
        MA SS    QPQI  SQ  LS ATKV+SGLKLQSASPFGGAKPN+T EFYGKVHKSLQ+                        R P EGTWQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG N+DEEFSNQILAT+LYLDSIE+SK LYMYINGPGGDLTPS+AIYDTMQSL+S V THCVGYAY+LAAFLLAAGEKG+R+AMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P GAARGQADD+RNEANELLRIRDYL++ELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

A0A6J1JZK9 ATP-dependent Clp protease proteolytic subunit1.4e-9274.79Show/hide
Query:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL
        MA SS    QPQI  SQ  +S ATKV+SGLKLQSASPFGGAKPN+T EFYGKVHKSLQ+                        R P EGTWQWVDLWNAL
Subjt:  MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------------RVPDEGTWQWVDLWNAL

Query:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP
        YRERV+FIG N+DEEFSNQILAT+LYLDSIE+SK LYMY+NGPGGDLTPS+AIYDTMQSL+S V THCVGYAY+LAAFLLAAGEKG+R+AMPLSRIALQ 
Subjt:  YRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQP

Query:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        P GAARGQADD+RNEANELLRIRDYL++ELSKKTGQPV
Subjt:  PSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

SwissProt top hitse value%identityAlignment
Q3MDK7 ATP-dependent Clp protease proteolytic subunit 23.0e-3950.97Show/hide
Query:  RVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAG
        R+P      W+ +++ LYRER++F+G +VD+E +NQI+A +LYLDS +  K +Y+YIN PGG +T  +AIYDTMQ ++S V T CVG A ++ +FLLAAG
Subjt:  RVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAG

Query:  EKGNRSAMPLSRIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
         KG R A+P SRI +  PSG  RGQA DI  EA E+LRIR  L    +  T QP+
Subjt:  EKGNRSAMPLSRIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

Q5N1Q7 ATP-dependent Clp protease proteolytic subunit 21.7e-3748.75Show/hide
Query:  SLQARVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFL
        S+  R+P     +W+D++N L  ER++F+G  V +  +N I+A +LYLDS ++SK +Y+YIN PGG +T  MAIYDTMQ ++SPV T C+G A ++ AFL
Subjt:  SLQARVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFL

Query:  LAAGEKGNRSAMPLSRIAL-QPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
        L AG KG R A+P SRI + QP  G  R QA DI  EA E+LRI+  L   ++ +TGQP+
Subjt:  LAAGEKGNRSAMPLSRIAL-QPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 28.5e-4253.55Show/hide
Query:  RVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAG
        R+P E   QW+D++N LYRER++F+G  VD+E +NQI+A +LYLDS +  K + +YIN PGG +T  MAIYDTMQ ++S V T CVG A ++ +FLLAAG
Subjt:  RVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAG

Query:  EKGNRSAMPLSRIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
         KG R A+P SRI +  PSG  RGQA DI  EA E+LR+R  L +  +  TGQP+
Subjt:  EKGNRSAMPLSRIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

Q8YP43 Probable ATP-dependent Clp protease proteolytic subunit 32.3e-3950.97Show/hide
Query:  RVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAG
        R+P      W+ +++ LYRER++F+G +VD+E +NQI+A +LYLDS +  K +Y+YIN PGG +T  +AIYDTMQ ++S V T CVG A ++ +FLLAAG
Subjt:  RVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAG

Query:  EKGNRSAMPLSRIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
         KG R A+P SRI +  PSG  RGQA DI  EA E+LRIR  L    +  T QP+
Subjt:  EKGNRSAMPLSRIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

Q9XJ36 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic4.7e-7766.52Show/hide
Query:  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------RVP----DEGTWQWVDLWNALYRERVVFIGLNVDEEF
        QPSL  S + K++SGLK QSAS       N+  EFYG+V+KSLQ+                  RVP    +EGTWQWVD+WNALYRERV+FIG N+DEEF
Subjt:  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------RVP----DEGTWQWVDLWNALYRERVVFIGLNVDEEF

Query:  SNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAARGQADDIRNEA
        SNQILAT+LYLD+++ S+++YMY+NGPGGDLTPS+AIYDTM+SL+SPV THCVG AYNLA FLLAAGEKG+R AMPLSRIALQ P+GAARGQADDI+NEA
Subjt:  SNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAARGQADDIRNEA

Query:  NELLRIRDYLYDELSKKTGQP
         EL RIRDYL++EL+K TGQP
Subjt:  NELLRIRDYLYDELSKKTGQP

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 52.1e-2743.8Show/hide
Query:  LYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQ
        L++ R++  G  VD++ +N I+A +LYLD+++ +K + MY+N PGG +T  MAI+DTM+ ++  V+T CVG A ++ AFLL+AG KG R ++P SRI + 
Subjt:  LYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQ

Query:  PPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQ
         P G A+G   DI  +ANE+L  +  L   L+  TGQ
Subjt:  PPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQ

AT1G12410.1 CLP protease proteolytic subunit 23.4e-7866.52Show/hide
Query:  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------RVP----DEGTWQWVDLWNALYRERVVFIGLNVDEEF
        QPSL  S + K++SGLK QSAS       N+  EFYG+V+KSLQ+                  RVP    +EGTWQWVD+WNALYRERV+FIG N+DEEF
Subjt:  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQA------------------RVP----DEGTWQWVDLWNALYRERVVFIGLNVDEEF

Query:  SNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAARGQADDIRNEA
        SNQILAT+LYLD+++ S+++YMY+NGPGGDLTPS+AIYDTM+SL+SPV THCVG AYNLA FLLAAGEKG+R AMPLSRIALQ P+GAARGQADDI+NEA
Subjt:  SNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAARGQADDIRNEA

Query:  NELLRIRDYLYDELSKKTGQP
         EL RIRDYL++EL+K TGQP
Subjt:  NELLRIRDYLYDELSKKTGQP

AT1G66670.1 CLP protease proteolytic subunit 34.8e-2435.14Show/hide
Query:  TWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRS
        +++ +D  N L R+R+VF+G  VD+  ++ +++ +L LD+ ++ + + ++IN PGG +T  M IYD M+  ++ V+T C+G A ++ AFLLA+G KG R 
Subjt:  TWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRS

Query:  AMPLSRIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQP
         MP S++ +  P G A G+A ++     E++  +  L    S+ TG+P
Subjt:  AMPLSRIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQP

AT5G23140.1 nuclear-encoded CLP protease P72.2e-2940.97Show/hide
Query:  DLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLS
        D+++ L +ER++ I   ++++ S+ ++A +LYL+S   SK ++MY+N PGG +T  +AIYDTMQ ++SP++T C+G A ++A+ LLAAG KG R ++P +
Subjt:  DLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLS

Query:  RIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
         + +  PSG   GQA DI     +++R+ D L +   K TGQP+
Subjt:  RIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV

ATCG00670.1 plastid-encoded CLP P5.8e-3041.67Show/hide
Query:  RVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAG
        R P EG   WVD++N LYRER+ F+G  VD E SNQ+++ ++YL   + +K LY++IN PGG +   MAIYDTMQ ++  V T C+G A ++A+F+L  G
Subjt:  RVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAG

Query:  EKGNRSAMPLSRIAL-QPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV
            R A P +R+ + QP S     Q  +   EA ELL++R+ +     ++TG+P+
Subjt:  EKGNRSAMPLSRIAL-QPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCTCTTCTGCTCAGAGTCTTCAACCTCAGATTAATGTTTCCCAGCCTTCTCTCAGCGTTGCGACGAAGGTTTTCTCGGGACTGAAGCTTCAATCTGCTAGTCC
ATTCGGAGGAGCAAAACCTAATATTACTACTGAATTCTATGGAAAAGTTCATAAAAGTCTACAAGCCAGAGTGCCTGACGAGGGAACTTGGCAATGGGTTGATTTGTGGA
ATGCCCTATATCGAGAACGAGTTGTCTTCATTGGGCTGAACGTTGATGAAGAGTTTAGCAATCAAATTTTGGCCACAATACTATATCTTGACAGCATTGAAACTTCCAAA
AAACTCTACATGTACATAAATGGCCCAGGTGGAGATCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGCAGAGTCCTGTAGCTACTCATTGCGTTGGTTA
TGCCTATAATCTAGCAGCCTTTCTTTTAGCAGCTGGAGAAAAGGGTAACCGCTCTGCCATGCCTCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACGTGGCC
AGGCTGATGACATTCGAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTATGATGAGCTTTCTAAAAAAACAGGCCAGCCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ACCCTAAAGGGGTCGTCCTCTTTCGCATTGGGTGCTCTGTTATCGAGTAGTAATGGCAGTCTCTTCTGCTCAGAGTCTTCAACCTCAGATTAATGTTTCCCAGCCTTCTC
TCAGCGTTGCGACGAAGGTTTTCTCGGGACTGAAGCTTCAATCTGCTAGTCCATTCGGAGGAGCAAAACCTAATATTACTACTGAATTCTATGGAAAAGTTCATAAAAGT
CTACAAGCCAGAGTGCCTGACGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTATATCGAGAACGAGTTGTCTTCATTGGGCTGAACGTTGATGAAGAGTTTAG
CAATCAAATTTTGGCCACAATACTATATCTTGACAGCATTGAAACTTCCAAAAAACTCTACATGTACATAAATGGCCCAGGTGGAGATCTAACTCCAAGTATGGCCATCT
ACGACACAATGCAGAGCTTGCAGAGTCCTGTAGCTACTCATTGCGTTGGTTATGCCTATAATCTAGCAGCCTTTCTTTTAGCAGCTGGAGAAAAGGGTAACCGCTCTGCC
ATGCCTCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACGTGGCCAGGCTGATGACATTCGAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTA
TGATGAGCTTTCTAAAAAAACAGGCCAGCCTGTTTAAAAGATTATCAAGGACATGAATCGAATGAAGCGATTTACTGCCCAGCAAGCTCTTGATTATGGACTCATAGACC
GTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATCCTGAAAGTGAGAATTTCCTAAAAAGTAAAAGATTAATTTGCAATTTTCAAACTCATTTCGTA
TCTATTATTGTGTCCACTTTGACCAATAAATCAACAGAATTGTGCGTTTTCTTATTTAAATTCTTTTTTTCTATTTGAAAAGTATCTTAATTTTAATTATCATTTCATGG
TTA
Protein sequenceShow/hide protein sequence
MAVSSAQSLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFYGKVHKSLQARVPDEGTWQWVDLWNALYRERVVFIGLNVDEEFSNQILATILYLDSIETSK
KLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRSAMPLSRIALQPPSGAARGQADDIRNEANELLRIRDYLYDELSKKTGQPV