CuGenDBv2

Gene ID	CmoCh15G012400
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein LITTLE ZIPPER 1-like
Genome location	Cmo_Chr15:8532589..8533510
RNA-Seq Expression	CmoCh15G012400
Synteny	CmoCh15G012400
Gene Ontology terms	NA
InterPro domains	IPR039312 - Protein LITTLE ZIPPER

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8647881.1 hypothetical protein Csa_000025 [Cucumis sativus]

5.6e-35

85.57

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MC+SATQS+LFH IQ+SKNRR SKRS  QVLRLT RRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

KAG6579456.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-41

97.92

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCI ATQSILFHQIQTSKN+RRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-31

81.63

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT--RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCI+ATQ ILFHQI TSKNRRR KRSKLQV RL+  RR  EEK GKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEF KKFPH +QRK
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT--RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]

3.7e-42

100

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]

2.6e-32

83.51

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCI+ATQ ILFHQI TSKNRRR KRSKLQV RL+RRR  EEK GKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEF KKFPH +QRK
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKF8 Uncharacterized protein

1.1e-36

86.46

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MC+SATQS+LFH IQ+SKNRR SKRS  QVLRLTRRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

A0A6J1B3H9 protein LITTLE ZIPPER 1-like

1.3e-21

69.62

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Query:  TSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ
        +SK R RSK+SK+Q+ RL+R+RCEEK+ KD+EL NL+LYL+NQ+II+EN+KLR+KAN+LHQEN+ALM+EFQKKFPHL++
Subjt:  TSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ

A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X2

5.9e-30

81.25

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT-RRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ
        MCISAT+S  FHQI TSKNRRR KRSKLQV RLT RRRC EEK+GKDIELKNLQLYL+NQTII+EN+KLRE+ANILHQEN+ALMTE QKKF HL++
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT-RRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ

A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X1

2.4e-31

82.11

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ
        MCISAT+S  FHQI TSKNRRR KRSKLQV RLTRRRC EEK+GKDIELKNLQLYL+NQTII+EN+KLRE+ANILHQEN+ALMTE QKKF HL++
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ

A0A6J1E3C5 protein LITTLE ZIPPER 1-like

1.8e-42

100

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

SwissProt top hits

e value

%identity

Alignment

F4IG60 Protein LITTLE ZIPPER 1

1.5e-06

39.77

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKK
        MC+S++++  F    T        +S +++ RL+RRR   +  K +E+ NL+LY++NQ II+EN+KL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKK

Q9LZX5 Protein LITTLE ZIPPER 2

2.0e-06

43.66

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Query:  RRRSK-RSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF
        + +SK ++ L++L LTRRR   K  K++E++NL+L+++NQ+II+EN+ L++KA +LH EN AL      K+
Subjt:  RRRSK-RSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF

Arabidopsis top hits

e value

%identity

Alignment

AT2G45450.1 protein binding

1.1e-07

39.77

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Query:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKK
        MC+S++++  F    T        +S +++ RL+RRR   +  K +E+ NL+LY++NQ II+EN+KL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKK

AT3G60890.1 protein binding

1.4e-07

43.66

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Query:  RRRSK-RSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF
        + +SK ++ L++L LTRRR   K  K++E++NL+L+++NQ+II+EN+ L++KA +LH EN AL      K+
Subjt:  RRRSK-RSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF

AT3G60890.2 protein binding

3.4e-06

43.06

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Query:  RRRSK-RSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF
        + +SK ++ L++L LT RRR   K  K++E++NL+L+++NQ+II+EN+ L++KA +LH EN AL      K+
Subjt:  RRRSK-RSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF

Sequences

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CDS sequence

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ATGTGCATCAGTGCAACGCAGAGTATTCTGTTCCATCAAATTCAGACTTCCAAGAACAGGAGACGATCAAAAAGATCCAAACTTCAAGTTCTAAGGCTTACCAGGAGGAG
ATGTGAAGAGAAGCTGGGGAAAGACATTGAGCTGAAGAATCTGCAGCTATATCTGAAGAATCAGACCATAATCAAAGAGAATGATAAGCTGAGAGAGAAAGCCAATATCC
TTCATCAAGAGAACATAGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTGAATCAAAGAAAATGA

mRNA sequence

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CATTATTCAACTAGAAAGGAAGGGCAAAAGTTAAGAAGCTGCATAGAAGAATAATGTGCATCAGTGCAACGCAGAGTATTCTGTTCCATCAAATTCAGACTTCCAAGAAC
AGGAGACGATCAAAAAGATCCAAACTTCAAGTTCTAAGGCTTACCAGGAGGAGATGTGAAGAGAAGCTGGGGAAAGACATTGAGCTGAAGAATCTGCAGCTATATCTGAA
GAATCAGACCATAATCAAAGAGAATGATAAGCTGAGAGAGAAAGCCAATATCCTTCATCAAGAGAACATAGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTGA
ATCAAAGAAAATGATGAGAATCATAAGAGCTTAACATGGTTGATTATCATCAGGGTTGCTAGTCTTGCTTGTTTCATTGCTTTAGTACCTTTATTTTGCATCAAAAAAAT
GAAAAACTATCAATTTCTGCGATTCTCTACTCGGGTAGATTAAGAGTCTTAGCTAAACATGGTCGAAACGACCGAAGTCGTTTCGAGAAGAAAGAACTCTCAAGTTTAGT
CCACAACATGATATCAACTGAGGAAGGTTCAGAAATATCCAGTTCTACTATAGAAAACTATGGAAGCTAAGAACGAACAATAATAGCAGTTCAAGTATAAGATTTACATG
CTTTGGAAATTTTTCGAATTCGGTCCATAACGATAGGTATTTCGTTATCAATCAAAGTTGTAAAACAGAATCCAAACCATCCTGGTTCAATACAACTACAGCTAGAGCCA
GGGGTAAGATTAACTTTACCTATATCCAACAGCTTTTCCCAGAGCTCAAGTTCGCC

Protein sequence

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MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

CmoCh15G012400 (gene) of Cucurbita moschata (Rifu) v1 genome