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CmoCh15G012760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G012760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box/LRR-repeat protein
Genome locationCmo_Chr15:8747852..8748106
RNA-Seq ExpressionCmoCh15G012760
SyntenyCmoCh15G012760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]1.2e-1768.6Show/hide
Query:  MASQNPI-TSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSL-PPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN
        MASQN    SL LFLFIILLTTT PL A RRL  +   PENDSL PP TT+FSF QPP  V++Q  S+NY VS RKVPAGPNPLHN
Subjt:  MASQNPI-TSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSL-PPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN

KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]6.9e-3798.81Show/hide
Query:  MASQNPITSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSLPPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN
        MASQNPITSL LFLFIILLTTTAPLSAGRRLSTAEQHPENDSLPPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN
Subjt:  MASQNPITSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSLPPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN

KAG6606114.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]6.3e-0651.9Show/hide
Query:  MASQNPITSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSLPPPTTS-FSFIQPPTTVENQAASQNYAVSHRKVPAG
        MAS NP +S  L   + +L TTA LSA        Q P NDSL PPT+S FS  + P  VE+  A QN+AVS RKVPAG
Subjt:  MASQNPITSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSLPPPTTS-FSFIQPPTTVENQAASQNYAVSHRKVPAG

KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]8.5e-1966.29Show/hide
Query:  MASQN--PITSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSL---PPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN
        MASQN  P  SL LFLF+ILLTTT PL A RR  T+   PENDSL   PP T++FSF QPP  VE+Q  S+NY VS RKVPAGPNPLHN
Subjt:  MASQN--PITSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSL---PPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein4.1e-1966.29Show/hide
Query:  MASQN--PITSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSL---PPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN
        MASQN  P  SL LFLF+ILLTTT PL A RR  T+   PENDSL   PP T++FSF QPP  VE+Q  S+NY VS RKVPAGPNPLHN
Subjt:  MASQN--PITSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSL---PPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN

A0A5A7THA6 F-box/LRR-repeat protein5.9e-1868.6Show/hide
Query:  MASQNPI-TSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSL-PPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN
        MASQN    SL LFLFIILLTTT PL A RRL  +   PENDSL PP TT+FSF QPP  V++Q  S+NY VS RKVPAGPNPLHN
Subjt:  MASQNPI-TSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSL-PPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAAAACCCCATTACCTCTCTCTCTCTCTTCCTCTTCATAATTCTCCTCACCACCACCGCCCCTCTCTCCGCCGGCCGCCGCCTCTCCACCGCCGAACAACA
CCCGGAAAATGATTCTCTCCCTCCACCCACCACCTCATTCTCATTCATACAGCCGCCAACCACCGTGGAAAACCAAGCCGCTTCCCAAAACTACGCCGTGTCACACCGCA
AAGTCCCCGCCGGTCCCAACCCACTTCATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCAAAACCCCATTACCTCTCTCTCTCTCTTCCTCTTCATAATTCTCCTCACCACCACCGCCCCTCTCTCCGCCGGCCGCCGCCTCTCCACCGCCGAACAACA
CCCGGAAAATGATTCTCTCCCTCCACCCACCACCTCATTCTCATTCATACAGCCGCCAACCACCGTGGAAAACCAAGCCGCTTCCCAAAACTACGCCGTGTCACACCGCA
AAGTCCCCGCCGGTCCCAACCCACTTCATAACTAA
Protein sequenceShow/hide protein sequence
MASQNPITSLSLFLFIILLTTTAPLSAGRRLSTAEQHPENDSLPPPTTSFSFIQPPTTVENQAASQNYAVSHRKVPAGPNPLHN