; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G013940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G013940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description50S ribosomal protein L11
Genome locationCmo_Chr15:9480233..9483583
RNA-Seq ExpressionCmoCh15G013940
SyntenyCmoCh15G013940
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000911 - Ribosomal protein L11/L12
IPR020783 - Ribosomal protein L11, C-terminal
IPR020784 - Ribosomal protein L11, N-terminal
IPR020785 - Ribosomal protein L11, conserved site
IPR036769 - Ribosomal protein L11, C-terminal domain superfamily
IPR036796 - Ribosomal protein L11/L12, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579598.1 50S ribosomal protein L11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-10881.36Show/hide
Query:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
        MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
Subjt:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG

Query:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT
        PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                          
Subjt:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT

Query:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                  GVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Subjt:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

KAG7017058.1 50S ribosomal protein L11, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-10680.29Show/hide
Query:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
        MASSLSIYHPF SKLTANSKHLSSSFLASPSSGLSSKFNF LRFFS+GQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
Subjt:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG

Query:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT
        PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                          
Subjt:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT

Query:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                  GVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Subjt:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

XP_022929065.1 50S ribosomal protein L11, chloroplastic [Cucurbita moschata]2.9e-10881.36Show/hide
Query:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
        MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
Subjt:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG

Query:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT
        PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                          
Subjt:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT

Query:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                  GVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Subjt:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

XP_022970097.1 50S ribosomal protein L11, chloroplastic [Cucurbita maxima]3.6e-10679.93Show/hide
Query:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
        MASSLSIYHPFSSK TANSKHLSSSFLASPSSG SSKFNFSLRFFS+GQSSSLISPTPRRLSVVSMAPPKAKPGGK+KKVIGVIKLALEAGKATPAPPVG
Subjt:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG

Query:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT
        PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                          
Subjt:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT

Query:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                  GVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Subjt:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

XP_023520503.1 50S ribosomal protein L11, chloroplastic [Cucurbita pepo subsp. pepo]2.7e-10680.29Show/hide
Query:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
        MASSLSIYHPF SKLTANSKHLSSSFLASPSSGLSSKFNF LRFFS+GQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
Subjt:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG

Query:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT
        PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                          
Subjt:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT

Query:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                  GVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Subjt:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

TrEMBL top hitse value%identityAlignment
A0A0A0KQJ8 Uncharacterized protein2.0e-9471.33Show/hide
Query:  MASSLSIYH-------PFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKA
        MASS+S YH        FSSK++A+S  LSS FL S SSGLSSKFNFSLRF ++GQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIG+IKLALEAGKA
Subjt:  MASSLSIYH-------PFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKA

Query:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLS
        TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                   
Subjt:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLS

Query:  IVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                         GVEKGSKDP+ +KVGKITIEQLR IAAEKLPDLNCTTIESAMR+IAGTAANMGIE+DPPVLEPK K LV
Subjt:  IVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

A0A1S3AU30 50S ribosomal protein L11, chloroplastic5.2e-9571.68Show/hide
Query:  MASSLSIYH-------PFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKA
        MASSLS YH        FSSK++ANS HLSS FL S SSGLSSKFNFSLRF ++GQSSSLIS TPRRLSVVSMAPPKAKPGGKAKKVIG+IKLALEAGKA
Subjt:  MASSLSIYH-------PFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKA

Query:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLS
        TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                   
Subjt:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLS

Query:  IVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                         GVEKGSKDP+ +KVGK+TIEQLR IAAEKLPDLNCTTIESAMR+IAGTAANMGIEVDPPVLEPK+K +V
Subjt:  IVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

A0A5D3C6S0 50S ribosomal protein L115.2e-9571.68Show/hide
Query:  MASSLSIYH-------PFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKA
        MASSLS YH        FSSK++ANS HLSS FL S SSGLSSKFNFSLRF ++GQSSSLIS TPRRLSVVSMAPPKAKPGGKAKKVIG+IKLALEAGKA
Subjt:  MASSLSIYH-------PFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKA

Query:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLS
        TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                   
Subjt:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLS

Query:  IVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                         GVEKGSKDP+ +KVGK+TIEQLR IAAEKLPDLNCTTIESAMR+IAGTAANMGIEVDPPVLEPK+K +V
Subjt:  IVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

A0A6J1ET69 50S ribosomal protein L11, chloroplastic1.4e-10881.36Show/hide
Query:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
        MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
Subjt:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG

Query:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT
        PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                          
Subjt:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT

Query:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                  GVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Subjt:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

A0A6J1HY65 50S ribosomal protein L11, chloroplastic1.7e-10679.93Show/hide
Query:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG
        MASSLSIYHPFSSK TANSKHLSSSFLASPSSG SSKFNFSLRFFS+GQSSSLISPTPRRLSVVSMAPPKAKPGGK+KKVIGVIKLALEAGKATPAPPVG
Subjt:  MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVG

Query:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT
        PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAA                                          
Subjt:  PALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHT

Query:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
                  GVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Subjt:  RLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

SwissProt top hitse value%identityAlignment
A9BDG7 50S ribosomal protein L112.2e-4252.63Show/hide
Query:  AKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLS
        AKK++ VIKLAL+AGKA PAPPVGPALG  GVNIMAFCK+YNAKT DKAG+VIPVEI+V++D+SFTF+ KTPPASVL+ KAAGI                
Subjt:  AKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLS

Query:  MFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEV
                                            EKGS D    +VG I   QL  IA  KLPDLNC+ IESAMRVI GTA NMG+ V
Subjt:  MFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEV

B8HVL5 50S ribosomal protein L111.7e-4250Show/hide
Query:  AKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLS
        AKKV+ +IKLA+ AGKA PAPP+GPALG  GVNIM FCK+YNA+TAD+AG VIPVEI+VY+D+SFTF+LKTPPASVL+ KAAGI                
Subjt:  AKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLS

Query:  MFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEV
                                            E+GS +P  +KVGKIT  QLR IA  KLPDLN   +++AMR++AGTA NMG+ +
Subjt:  MFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEV

O78412 50S ribosomal protein L11, chloroplastic5.8e-4352.63Show/hide
Query:  AKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLS
        AKKV+ +IKLALEAGKATPAPPVGPALG +GVNI+ FCKDYNA+TADKAG +IPVEITVY+DKS+TFVLKTPPASVLL KAA                  
Subjt:  AKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLS

Query:  MFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEV
                                          GV+KGS +P+  +VG +T +Q+  IA  KLPDLN   +ESA+R+I GTA NMGI V
Subjt:  MFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEV

P31164 50S ribosomal protein L11, chloroplastic4.0e-6859.04Show/hide
Query:  PFSSKLTAN-SKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGV
        P SS +T+   + L SS L   S  LSS    SL+F +     S  S + RRLS+V+MAP   KP GKAKKVIGVIKLALEAGKATPAPPVGPALGSKGV
Subjt:  PFSSKLTAN-SKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGV

Query:  NIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEY
        NIMAFCKDYNA+TADK G+VIPVEITV+DDKSFTF+LKTPPASVLLLKA+                                                  
Subjt:  NIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEY

Query:  ALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
          G EKGSKDPQ +KVGKITI+QLR IA EKLPDLNCTTIESAMR+IAGTAANMGI++DPP+L  KKKE++
Subjt:  ALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

Q9MAP3 50S ribosomal protein L11, chloroplastic6.8e-7662.5Show/hide
Query:  TANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCK
        T++S H +S    S S+ LSSK N S++F    Q S L+S TPR L+V++MAPP  KPGGKAKKV+GVIKLALEAGKATPAPPVGPALGSKGVNIMAFCK
Subjt:  TANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCK

Query:  DYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKG
        DYNA+TADKAGY+IPVEITV+DDKSFTF+LKTPPASVLLLKAA                                                    GVEKG
Subjt:  DYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKG

Query:  SKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
        SKDPQ  KVG ITI+QLR IAAEKLPDLNCTTIESAMR+IAGTAANMGI++DPP+LEPKKK ++
Subjt:  SKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

Arabidopsis top hitse value%identityAlignment
AT1G32990.1 plastid ribosomal protein l114.9e-7762.5Show/hide
Query:  TANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCK
        T++S H +S    S S+ LSSK N S++F    Q S L+S TPR L+V++MAPP  KPGGKAKKV+GVIKLALEAGKATPAPPVGPALGSKGVNIMAFCK
Subjt:  TANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCK

Query:  DYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKG
        DYNA+TADKAGY+IPVEITV+DDKSFTF+LKTPPASVLLLKAA                                                    GVEKG
Subjt:  DYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKG

Query:  SKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
        SKDPQ  KVG ITI+QLR IAAEKLPDLNCTTIESAMR+IAGTAANMGI++DPP+LEPKKK ++
Subjt:  SKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV

AT4G35490.1 mitochondrial ribosomal protein L119.0e-1531.77Show/hide
Query:  KKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTAD-KAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLS
        + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NA+T   K    + V IT + D SF F +K+P  S  + KAA                  
Subjt:  KKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTAD-KAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLS

Query:  MFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNC--TTIESAMRVIAGTAANMGIEV
                                          GV+KGS  P    V  +++  +  IA  K  D  C    +ES  + I GTA +MGI++
Subjt:  MFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNC--TTIESAMRVIAGTAANMGIEV

AT5G51610.1 Ribosomal protein L11 family protein3.3e-3337.64Show/hide
Query:  SIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGS
        S++HP S  ++AN               L+SK N S +F ++ Q S L+S TPR L+V++ A   +K  GK KKV+G++K+ + AGKAT APP       
Subjt:  SIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGS

Query:  KGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHTRLPSQ
                                        D+SFTF+LKTPP S LLLKAA                                               
Subjt:  KGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHTRLPSQ

Query:  LEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKK
             GV+KGSKDP+  KVG ITI+Q+R IA  KLP+LNCTTI S MR IAGTA NMGI++DPP+LEPK K
Subjt:  LEYALGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTCCCTCTCCATCTATCATCCATTTTCTTCTAAACTTACTGCTAATTCCAAGCATCTTTCCTCTTCCTTTCTTGCTTCACCCTCTTCAGGGTTGTCTTCAAA
GTTCAATTTCTCGCTTCGATTCTTCAGCCATGGCCAATCTTCGTCGCTAATCTCTCCCACTCCAAGGCGTCTCAGTGTTGTCTCAATGGCGCCTCCTAAAGCCAAGCCTG
GTGGAAAAGCCAAGAAGGTAATTGGGGTGATTAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCTAAGGGTGTTAATATT
ATGGCTTTCTGTAAGGATTACAATGCCAAGACTGCCGACAAGGCTGGCTACGTTATTCCAGTTGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTCAAGAC
TCCCCCTGCTTCAGTTCTTCTTCTCAAGGCTGCTGGTATTTCCCTTTTGAACTGTTTGATTGGATCCATAGTTCCTCAGTGGCTATCAATGTTTGGGCACAAACCCTCCC
AGGGATGGAGGGACTGTTGCAGCTTGAGCATTGTGGCTGGGCGGCATACTCGCCTCCCATCACAGCTCGAGTATGCGTTAGGAGTTGAAAAGGGATCAAAAGATCCACAG
GCACAAAAAGTGGGAAAGATAACCATTGAACAGCTGCGTGTGATTGCTGCAGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCAGCAATGAGGGTCATAGCAGG
GACAGCAGCCAATATGGGAATTGAGGTCGATCCTCCTGTTCTTGAACCTAAAAAGAAGGAACTTGTGTAG
mRNA sequenceShow/hide mRNA sequence
GTTGTGAAAAAACGGAACGTTTTATGTCATTTGCGGGGTTTATCCACAAGAAGTTTTGAGAGCTCTCTGTGTTTGCTTATCCATGGCGTCCTCCCTCTCCATCTATCATC
CATTTTCTTCTAAACTTACTGCTAATTCCAAGCATCTTTCCTCTTCCTTTCTTGCTTCACCCTCTTCAGGGTTGTCTTCAAAGTTCAATTTCTCGCTTCGATTCTTCAGC
CATGGCCAATCTTCGTCGCTAATCTCTCCCACTCCAAGGCGTCTCAGTGTTGTCTCAATGGCGCCTCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAGGTAATTGGGGT
GATTAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCTAAGGGTGTTAATATTATGGCTTTCTGTAAGGATTACAATGCCA
AGACTGCCGACAAGGCTGGCTACGTTATTCCAGTTGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTCAAGACTCCCCCTGCTTCAGTTCTTCTTCTCAAG
GCTGCTGGTATTTCCCTTTTGAACTGTTTGATTGGATCCATAGTTCCTCAGTGGCTATCAATGTTTGGGCACAAACCCTCCCAGGGATGGAGGGACTGTTGCAGCTTGAG
CATTGTGGCTGGGCGGCATACTCGCCTCCCATCACAGCTCGAGTATGCGTTAGGAGTTGAAAAGGGATCAAAAGATCCACAGGCACAAAAAGTGGGAAAGATAACCATTG
AACAGCTGCGTGTGATTGCTGCAGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCAGCAATGAGGGTCATAGCAGGGACAGCAGCCAATATGGGAATTGAGGTC
GATCCTCCTGTTCTTGAACCTAAAAAGAAGGAACTTGTGTAGCCATTTGTGAGAAATTGGTTTATTCTTTACCTTTTTTGTATGCTTTGATCTATTTGAGGTATCTTAAT
GTAACATTTACAAGTCCACAATCAAGCTTCCTACTTTCTATATGGTTCCTGTTCTTGATTTTACTTAGCTTTCTTCTTTGTTTATCGTGAATAGCATTCCATTTCGAGCC
TCGGTTTCGAGCATGGGCTCGGAATCAACAATTTTATCCACTATGGTTTCTTGTTC
Protein sequenceShow/hide protein sequence
MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNI
MAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGISLLNCLIGSIVPQWLSMFGHKPSQGWRDCCSLSIVAGRHTRLPSQLEYALGVEKGSKDPQ
AQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV