; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G014300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G014300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionU6 snRNA phosphodiesterase
Genome locationCmo_Chr15:9712976..9714618
RNA-Seq ExpressionCmoCh15G014300
SyntenyCmoCh15G014300
Gene Ontology termsGO:0034477 - U6 snRNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990838 - poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (molecular function)
InterPro domainsIPR027521 - U6 snRNA phosphodiesterase Usb1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579639.1 U6 snRNA phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]3.3e-10494.88Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPS--------SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYI
        MEALMASYGGSSSDEDVDTVSPS        SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYI
Subjt:  MEALMASYGGSSSDEDVDTVSPS--------SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYI

Query:  TTNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTF
         TNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTF
Subjt:  TTNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTF

Query:  LSMEIIAGGLMEVRQ
        LSMEIIAGGLME+R+
Subjt:  LSMEIIAGGLMEVRQ

KAG7017094.1 U6 snRNA phosphodiesterase [Cucurbita argyrosperma subsp. argyrosperma]8.6e-10597.1Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
        MEALMASYGGSSSDEDVDTVS +SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQA+RVRSFPHVQGNYALHLYIPVYI TNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEVRQ
        GLME+R+
Subjt:  GLMEVRQ

XP_022928923.1 U6 snRNA phosphodiesterase [Cucurbita moschata]4.1e-10799.03Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
        MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEVRQ
        GLME+R+
Subjt:  GLMEVRQ

XP_022969741.1 U6 snRNA phosphodiesterase [Cucurbita maxima]2.3e-10294.37Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPS------SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITT
        MEALMASYGGSSSDED DTVSPS      SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYA+HLYIPVYI T
Subjt:  MEALMASYGGSSSDEDVDTVSPS------SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITT

Query:  NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
        NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
Subjt:  NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIIAGGLMEVRQ
        MEIIAGGLME+R+
Subjt:  MEIIAGGLMEVRQ

XP_023549871.1 U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]1.5e-10497.13Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPS--SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARK
        MEALMASYGGSSSDEDVDTVSPS  SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYA+HLYIPVYI TNARK
Subjt:  MEALMASYGGSSSDEDVDTVSPS--SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARK

Query:  EVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        EVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  AGGLMEVRQ
        AGGLME+R+
Subjt:  AGGLMEVRQ

TrEMBL top hitse value%identityAlignment
A0A0A0KPH5 U6 snRNA phosphodiesterase3.1e-9285.99Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
        M+AL ASYGGSSSDE+VDTVSP SAS SA  PQ  DET +FLPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYALH+YIPVY+ TNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALF+KK+S LVPALHLVDIDIPLD+LCKDD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII G
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEVRQ
        GLME+R+
Subjt:  GLMEVRQ

A0A1S3CTB0 U6 snRNA phosphodiesterase2.1e-9386.96Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
        M+AL ASYGGSSSDE+VDTVSPSSAS S   PQ  DET S LPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYALH+YIPVY+ TNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALF+KK+S LVPALHLVDIDIPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII G
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEVRQ
        GLME+R+
Subjt:  GLMEVRQ

A0A5A7UND6 U6 snRNA phosphodiesterase9.6e-9487.5Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
        M+AL ASYGGSSSDE+VDTVSPSSAS S   PQ  DET S LPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYALH+YIPVY+ TNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALF+KK+S LVPALHLVDIDIPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII G
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEVRQI
        GLMEVR I
Subjt:  GLMEVRQI

A0A6J1EQH7 U6 snRNA phosphodiesterase2.0e-10799.03Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
        MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEVRQ
        GLME+R+
Subjt:  GLMEVRQ

A0A6J1HYN3 U6 snRNA phosphodiesterase1.1e-10294.37Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPS------SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITT
        MEALMASYGGSSSDED DTVSPS      SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYA+HLYIPVYI T
Subjt:  MEALMASYGGSSSDEDVDTVSPS------SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITT

Query:  NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
        NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
Subjt:  NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIIAGGLMEVRQ
        MEIIAGGLME+R+
Subjt:  MEIIAGGLMEVRQ

SwissProt top hitse value%identityAlignment
Q0II50 U6 snRNA phosphodiesterase7.0e-0927.72Show/hide
Query:  ALMASYGGSSSDEDVDT---VSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKE
        A +  Y  S S+++ +    V P +   S     L  +      LP P   L  FP++     D       RVR+FPH +GN+A H+YIP      AR+E
Subjt:  ALMASYGGSSSDEDVDT---VSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKE

Query:  VALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALARE-FHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
                      L L+D      +LC     + + +  E FH+SLS++V +R H I   V  L+ ++ S  R+     + + + N + +RTF+ +E+ 
Subjt:  VALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALARE-FHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  AG
        +G
Subjt:  AG

Q5I0I5 U6 snRNA phosphodiesterase1.2e-1123.74Show/hide
Query:  ALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVAL
        A +  Y  S S+++ + V+   +   + L +           P P   L  FP++    +D       R+R+FPH +GN+A H+YIP       +  + +
Subjt:  ALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVAL

Query:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
         L +     P L  ++                     EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E+ +G
Subjt:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Q6DEF6 U6 snRNA phosphodiesterase1.1e-0929.02Show/hide
Query:  LMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFL----------------PLPPPPLSLLD-FPNSTSALDDLPIGQAARVRSFPHVQGNYALHL
        ++ +Y  SSS+E+    S SS+S S    +L  ET   L                P  P P S+ + F +S     D       R+RSF H +GN+A ++
Subjt:  LMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFL----------------PLPPPPLSLLD-FPNSTSALDDLPIGQAARVRSFPHVQGNYALHL

Query:  YIPVYITTNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVND
        + P Y    A      FL+ L+K++ A    DI +               ++ EFH+SLS+TV +R H I   V  +R  L   ++++    K + + N 
Subjt:  YIPVYITTNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVND

Query:  DLSRTFLSMEIIAG--GLMEVRQI
        + +RTFL ME+  G   L+E+ +I
Subjt:  DLSRTFLSMEIIAG--GLMEVRQI

Q91W78 U6 snRNA phosphodiesterase2.8e-1325.25Show/hide
Query:  ALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVAL
        A +  Y  S S+++ + V+   +       +          LP P   L  FP++    +D       R+R+FPH +GN+A H+YIP     + R  +  
Subjt:  ALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVAL

Query:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
         L +    VP L L++                     EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E+ +G
Subjt:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Q9BQ65 U6 snRNA phosphodiesterase9.2e-0927.59Show/hide
Query:  ALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLP----PPPLSLLD-FPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNAR
        A +  Y  S S+++       S     + P          PLP    P P S+L+ FP +    +D       RVR+FPH +GN+A H+Y+P      A+
Subjt:  ALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLP----PPPLSLLD-FPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNAR

Query:  KEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEI
        +E   FL  L  L+P        +P  +  K            FH+SLS++V +R H I   V  L+ ++ S  R++   ++ + + N + +RTF+ +E+
Subjt:  KEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEI

Query:  IAG
         +G
Subjt:  IAG

Arabidopsis top hitse value%identityAlignment
AT5G51170.1 unknown protein2.4e-6059.02Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
        MEAL ASYG SSSD D D +SP+S   +      S E +S + LPPPPL+LLD   ST +LD        RVR+FPHV GNYALH+Y+PV I    +KE+
Subjt:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
          FLKK++ +VP LHLV+ D+PL ILCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY IDF+KWE FVNDD +R+FLS+EI   
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEV
        GL E+
Subjt:  GLMEV

AT5G51170.2 unknown protein1.8e-6059.51Show/hide
Query:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV
        MEAL ASYG SSSD D D +SP+S   +      S E +S + LPPPPL+LLD   ST +LD        RVR+FPHV GNYALH+Y+PV I    +KE+
Subjt:  MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
          FLKK++ +VP LHLV+ D+PL ILCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY IDF+KWE FVNDD +R+FLS+EI   
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEV
        GL EV
Subjt:  GLMEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTCTGATGGCTTCTTATGGCGGAAGCTCGTCGGATGAAGATGTGGATACAGTTTCCCCTTCATCAGCATCAGCTTCGGCTTCACTACCTCAGCTCTCCGATGA
GACTGAGAGTTTTTTACCTCTGCCTCCGCCGCCTCTTTCGCTTCTCGATTTTCCAAATTCCACCTCCGCTTTGGATGATTTACCAATCGGTCAGGCGGCTAGGGTTCGAA
GCTTCCCTCACGTTCAAGGAAATTATGCCCTACACCTCTATATCCCAGTGTACATAACAACTAATGCAAGGAAGGAGGTGGCGTTGTTTCTGAAGAAACTTTCCAAACTT
GTGCCTGCTCTCCATCTTGTTGATATTGACATTCCTTTAGACATTTTATGTAAAGATGACCACAAGCTTGAGCAAGCATTGGCCAGAGAATTTCACATAAGTTTGTCAAG
AACAGTGCCAATCCGAGTACACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTG
TTAACGATGATCTCTCCCGAACCTTTTTGTCAATGGAAATTATTGCTGGAGGGCTAATGGAGGTGCGTCAGATTTGA
mRNA sequenceShow/hide mRNA sequence
TTGACAGAGCAGAGGATGGAGGCTCTGATGGCTTCTTATGGCGGAAGCTCGTCGGATGAAGATGTGGATACAGTTTCCCCTTCATCAGCATCAGCTTCGGCTTCACTACC
TCAGCTCTCCGATGAGACTGAGAGTTTTTTACCTCTGCCTCCGCCGCCTCTTTCGCTTCTCGATTTTCCAAATTCCACCTCCGCTTTGGATGATTTACCAATCGGTCAGG
CGGCTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAATTATGCCCTACACCTCTATATCCCAGTGTACATAACAACTAATGCAAGGAAGGAGGTGGCGTTGTTTCTGAAG
AAACTTTCCAAACTTGTGCCTGCTCTCCATCTTGTTGATATTGACATTCCTTTAGACATTTTATGTAAAGATGACCACAAGCTTGAGCAAGCATTGGCCAGAGAATTTCA
CATAAGTTTGTCAAGAACAGTGCCAATCCGAGTACACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTA
AGTGGGAGACTTTTGTTAACGATGATCTCTCCCGAACCTTTTTGTCAATGGAAATTATTGCTGGAGGGCTAATGGAGGTGCGTCAGATTTGA
Protein sequenceShow/hide protein sequence
MEALMASYGGSSSDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVALFLKKLSKL
VPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEVRQI