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CmoCh15G014640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G014640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF565)
Genome locationCmo_Chr15:9942949..9943416
RNA-Seq ExpressionCmoCh15G014640
SyntenyCmoCh15G014640
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007572 - Uncharacterised protein family Ycf20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579671.1 hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia]3.5e-7998.71Show/hide
Query:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQSASLVSTGLLNYAFTPQKNASYWRYD+IKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

KAG7017120.1 putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-7697.99Show/hide
Query:  LVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVI
        +VSTGLLNYAFTPQKNASYWRYD+IKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVI
Subjt:  LVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVI

Query:  AAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        AAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Subjt:  AAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

XP_022928979.1 uncharacterized protein ycf20 [Cucurbita moschata]9.3e-80100Show/hide
Query:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

XP_022969949.1 uncharacterized protein ycf20 [Cucurbita maxima]2.3e-7899.35Show/hide
Query:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSL IKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

XP_023549885.1 uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo]1.6e-7999.35Show/hide
Query:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPS1 Uncharacterized protein1.2e-7291.67Show/hide
Query:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPS-PRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQSASLV T LLNY FTP+ N SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPS-PRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

A0A1S3CT33 uncharacterized protein ycf20 isoform X11.7e-7190.38Show/hide
Query:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPS-PRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQS SLV TGLLNY F+ + N+SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPS-PRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

A0A5D3BMH1 Ycf20-like protein isoform X17.7e-6494.07Show/hide
Query:  NASYWRYDVIKSRPS-PRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR
        N SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR
Subjt:  NASYWRYDVIKSRPS-PRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR

Query:  FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        FYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

A0A6J1ESY7 uncharacterized protein ycf204.5e-80100Show/hide
Query:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

A0A6J1I440 uncharacterized protein ycf201.1e-7899.35Show/hide
Query:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSL IKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

SwissProt top hitse value%identityAlignment
P51214 Uncharacterized protein ycf207.6e-0846.15Show/hide
Query:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        G ISLL GF+++  +S   G  G   +IAA + V   E V++  YS + K    + LLNN K+G TYGLF+DAFKL S
Subjt:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

P72983 Ycf20-like protein2.0e-0835.24Show/hide
Query:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPVALLNNFKMGFTYGLFIDA
        RL  I+ +  +    +FR+P RR     +S L GF+V   ++ + G     DV+ A   +L  E V R++Y R          +LN FKMG +Y LF++A
Subjt:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPVALLNNFKMGFTYGLFIDA

Query:  FKLAS
        FKL S
Subjt:  FKLAS

Q1XDS2 Uncharacterized protein ycf206.8e-0941.24Show/hide
Query:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPVALLNNFKMGFTYGLFIDAFKLAS
        L+  L+   + S S     G ISLL GF+++  +S   G  G   +IAA + V  TE  ++  YS  K +   + L NNFK+G TYGLF+DAFKL S
Subjt:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPVALLNNFKMGFTYGLFIDAFKLAS

Q9MUL5 Uncharacterized protein ycf203.9e-0436.59Show/hide
Query:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPVALL-----NNFKMGFTYGLFIDAFKLAS
        LL GF++A  ++  FG  G  DV+ A + V + E +    YS+     K  F ++ L     N  K+G  +GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPVALL-----NNFKMGFTYGLFIDAFKLAS

Arabidopsis top hitse value%identityAlignment
AT1G65420.1 Protein of unknown function (DUF565)1.4e-0436.25Show/hide
Query:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPVALLNNFKMGFTYGLFIDAFKLAS
        LL GFY A  ++   G  G  DV+ A + V   E +    Y +P       K+   V  +N +K G   GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPVALLNNFKMGFTYGLFIDAFKLAS

AT5G43050.1 Protein of unknown function (DUF565)3.9e-5268.99Show/hide
Query:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPR-SLCIKAVQDTGG--PRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF
        MA S S +ST L +      +  S+  +     +   R +  I+A+Q+T G  PRRL+DIIR VPE+SRNYF+ PSRR LFGGISLLGGFYVAQTISLSF
Subjt:  MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPR-SLCIKAVQDTGG--PRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF

Query:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
        GALGVNDVIAAV+CVLLTEYVTRFYYSR  VTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAATCTGCAAGTTTAGTCTCTACTGGCCTCCTAAATTATGCCTTTACTCCTCAAAAGAATGCTTCATATTGGAGATATGATGTGATAAAATCACGGCCATCCCC
TCGTAGTCTTTGTATCAAAGCTGTGCAAGATACCGGAGGCCCTCGTAGGTTGGTTGATATCATTAGACTGGTGCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTCGA
GGAGGGCTCTCTTTGGAGGAATCTCTTTGTTGGGTGGGTTTTATGTGGCACAAACTATATCATTGTCGTTTGGAGCTTTGGGAGTAAATGATGTGATTGCTGCTGTGGTA
TGTGTTCTTCTTACTGAATATGTTACTCGCTTTTATTACAGTCGACCCAAAGTAACCTTCCCTGTTGCTCTGCTAAACAACTTCAAAATGGGATTCACTTATGGTCTTTT
CATTGATGCTTTCAAACTTGCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAATCTGCAAGTTTAGTCTCTACTGGCCTCCTAAATTATGCCTTTACTCCTCAAAAGAATGCTTCATATTGGAGATATGATGTGATAAAATCACGGCCATCCCC
TCGTAGTCTTTGTATCAAAGCTGTGCAAGATACCGGAGGCCCTCGTAGGTTGGTTGATATCATTAGACTGGTGCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTCGA
GGAGGGCTCTCTTTGGAGGAATCTCTTTGTTGGGTGGGTTTTATGTGGCACAAACTATATCATTGTCGTTTGGAGCTTTGGGAGTAAATGATGTGATTGCTGCTGTGGTA
TGTGTTCTTCTTACTGAATATGTTACTCGCTTTTATTACAGTCGACCCAAAGTAACCTTCCCTGTTGCTCTGCTAAACAACTTCAAAATGGGATTCACTTATGGTCTTTT
CATTGATGCTTTCAAACTTGCTAGTTAA
Protein sequenceShow/hide protein sequence
MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVV
CVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS