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CmoCh15G014650 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G014650
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationCmo_Chr15:9944622..9948218
RNA-Seq ExpressionCmoCh15G014650
SyntenyCmoCh15G014650
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143640.2 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus]9.5e-8896.2Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGILKSIKDKG+GTF R+LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022929152.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata]2.0e-90100Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022958111.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata]2.5e-8896.84Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGI+KSIKDKG+GTF R+LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022969961.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 isoform X1 [Cucurbita maxima]5.5e-8896.84Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGILKSIKDKG+GTFLR+ KEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ+LDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALN GQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_023550885.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 isoform X1 [Cucurbita pepo subsp. pepo]3.5e-9099.37Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGILKSIKDKG+GTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

TrEMBL top hitse value%identityAlignment
A0A0A0KNC9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 124.6e-8896.2Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGILKSIKDKG+GTF R+LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1ELZ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 129.9e-91100Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1H155 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.2e-8896.84Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGI+KSIKDKG+GTF R+LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1HZ90 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.7e-8896.84Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGILKSIKDKG+GTFLR+ KEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ+LDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALN GQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1K5W7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 126.0e-8896.2Show/hide
Query:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGI+KSIKDKG+GTF R+LKEEGYLKCLPDGNLLQTKIH IGATLVGVDKFGNKYYQKLDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

SwissProt top hitse value%identityAlignment
O97725 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.6e-1137.39Show/hide
Query:  GYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH
        GYL+ L   N ++        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH +TD                 H
Subjt:  GYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH

Query:  KENFSGEGEELIYHS
        K N SG  ++ + +S
Subjt:  KENFSGEGEELIYHS

Q0MQ85 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.5e-1141.49Show/hide
Query:  TLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS
        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH ITD       +         HK N +G  E+ + +S
Subjt:  TLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 123.6e-1344.87Show/hide
Query:  TLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSG
        TLVGVDK GN+YY+  + Q  YGRHRWVEY +    + + +PPE+H W+H+++D    E+L   P+ Y   H  N +G
Subjt:  TLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSG

Q9M9M9 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 124.0e-7377.56Show/hide
Query:  SVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD
        +V +  L++I++KGLG F+R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKL + TQYGRHRWVEYA K RYNASQVP EWHGWLH+ITD
Subjt:  SVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

Q9N2W7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.7e-1342.86Show/hide
Query:  TLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHYITDHTGDELLMLKP---SRYGIEHKENFSGEGEELIYHSKGHALNPG
        TLVG D FGN+YY+  +      R+RWVE+ +K    Y+A+QVPPEWH WLH+IT    D+   +KP     + +EHKEN S      IY  K +   P 
Subjt:  TLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHYITDHTGDELLMLKP---SRYGIEHKENFSGEGEELIYHSKGHALNPG

Query:  QRDWTRYQSWQP
            T+ Q WQP
Subjt:  QRDWTRYQSWQP

Arabidopsis top hitse value%identityAlignment
AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit2.8e-7477.56Show/hide
Query:  SVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD
        +V +  L++I++KGLG F+R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKL + TQYGRHRWVEYA K RYNASQVP EWHGWLH+ITD
Subjt:  SVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

AT3G03100.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit1.4e-7376.92Show/hide
Query:  SVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD
        +V +  L++I++KGLG F+R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKL + TQYG HRWVEYA K RYNASQVP EWHGWLH+ITD
Subjt:  SVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCCTCGGTACTTTCTTGAGAGACCTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGAT
GGAAACTTATTGCAAACCAAAATTCACAACATCGGTGCGACACTTGTGGGTGTCGATAAGTTTGGAAATAAATATTACCAGAAGCTCGATGAACAAACTCAATAT
GGAAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGTTATAATGCTTCTCAGGTGCCGCCCGAATGGCATGGCTGGCTCCACTACATAACCGATCACACAGGA
GACGAGCTTCTGATGCTGAAACCGAGTAGGTATGGGATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTAATCTACCATTCCAAGGGACATGCTCTT
AATCCTGGGCAGAGAGATTGGACTCGCTATCAGTCATGGCAACCAACCAAGTCCTAA
mRNA sequenceShow/hide mRNA sequence
GTATTAGACCATCTTACCCTCATCGTCCTGGAGGCAGCTGCTTGGACTGAAGAAGATCAGCAATCGAGAGTCGGAAGCGCAAGAACACCGAGAAGAGAAATGGCT
TCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCCTCGGTACTTTCTTGAGAGACCTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAAC
TTATTGCAAACCAAAATTCACAACATCGGTGCGACACTTGTGGGTGTCGATAAGTTTGGAAATAAATATTACCAGAAGCTCGATGAACAAACTCAATATGGAAGA
CACAGGTGGGTTGAATATGCAGAGAAGGGTCGTTATAATGCTTCTCAGGTGCCGCCCGAATGGCATGGCTGGCTCCACTACATAACCGATCACACAGGAGACGAG
CTTCTGATGCTGAAACCGAGTAGGTATGGGATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTAATCTACCATTCCAAGGGACATGCTCTTAATCCT
GGGCAGAGAGATTGGACTCGCTATCAGTCATGGCAACCAACCAAGTCCTAAGTAATTTGTGTATCAATTCCTTTGTTCAATTTGGAAATCCATGGGATATCTGGT
TGTGTTCTTTCCTGTTCTTCTTAATAAGCGACTTGTTGTTGTCTCTGCAAGCTGTGAATTATTTTTCATCGTGTTTACTGCAAACACATGAGGGATTTTCTGCAT
GTTTCTGTTCTTTTGTGCCACGTCTTAGCGACCACTGTGATAGAACGTTATATCGTGGCAGTGTATCAGATGTTATCAGCTTTGGGCATTCCTAAAATGAAAGTT
AGTGTCTCGAAATGTTTGAAATTCATACTCAAATTTTGATATTA
Protein sequenceShow/hide protein sequence
MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTG
DELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS