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CmoCh16G000160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G000160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 .
Genome locationCmo_Chr16:99282..100177
RNA-Seq ExpressionCmoCh16G000160
SyntenyCmoCh16G000160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576620.1 hypothetical protein SDJN03_24194, partial [Cucurbita argyrosperma subsp. sororia]1.3e-8196.77Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP
        MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSH  SDSDSDVSLVAEKGQVACRDYPHARYLCL FP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP

Query:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL
        FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNS+NNH PPPLL
Subjt:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL

XP_022140919.1 uncharacterized protein LOC111011466 [Momordica charantia]5.2e-3855.06Show/hide
Query:  MKGAK-KRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKF
        M G+K K R     + RMQ  E   PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S    D+DS++S+V EKGQVACRDYPHARYLC+KF
Subjt:  MKGAK-KRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKF

Query:  PFPTTPHQTYCEMCYCYVCDAIAPCDHWTSHC---HADQFSKRERRSNSDNNHTPPPL
        PF TTPHQ+ C MC+CYVCD+ APCDHW+ HC   H +   +  R   ++N + P  L
Subjt:  PFPTTPHQTYCEMCYCYVCDAIAPCDHWTSHC---HADQFSKRERRSNSDNNHTPPPL

XP_022922610.1 uncharacterized protein LOC111430566 [Cucurbita moschata]5.1e-86100Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP
        MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP

Query:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL
        FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL
Subjt:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL

XP_022984372.1 uncharacterized protein LOC111482692 [Cucurbita maxima]4.3e-7791.61Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP
        MKGAKK+RRLNSKS RMQKEED+EPLRP+LCVKNINKLDLKRFDAM++CYLLDFDPFHSLNQTLSH  SDSDSDVSLVAEKGQVACRDYPHARYLCLK P
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP

Query:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL
        FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQ  KRERRSNS+NNHTPPP L
Subjt:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL

XP_023552151.1 uncharacterized protein LOC111809913 [Cucurbita pepo subsp. pepo]5.8e-8295.48Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP
        MKGAKKRRRLNSKSKRMQKEEDDEPLRP+LCVKN NKLDLKRFDA EECYLLDF+PFHSLNQTLSH+DSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP

Query:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL
        FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQF KRERRSNS+NNHTPPPLL
Subjt:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL

TrEMBL top hitse value%identityAlignment
A0A6J1AYQ8 uncharacterized protein LOC1104224974.4e-3550.68Show/hide
Query:  NSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTY
        N K K+ ++EED  PLRP+ C+K    +D+KR + ME+C++LDF+PF S++   LS ++   D D+S+V EKGQ+ACRDYPH+R+LCL+FPF TTPH+ +
Subjt:  NSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTY

Query:  CEMCYCYVCDAIAPCDHWTSHCHADQFS---KRERRSNSDNNHTPPPL
        C +CYCYVCD+ APC +W +HCHA +     K +R+S    N  PP L
Subjt:  CEMCYCYVCDAIAPCDHWTSHCHADQFS---KRERRSNSDNNHTPPPL

A0A6J1CH43 uncharacterized protein LOC1110114662.5e-3855.06Show/hide
Query:  MKGAK-KRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKF
        M G+K K R     + RMQ  E   PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S    D+DS++S+V EKGQVACRDYPHARYLC+KF
Subjt:  MKGAK-KRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKF

Query:  PFPTTPHQTYCEMCYCYVCDAIAPCDHWTSHC---HADQFSKRERRSNSDNNHTPPPL
        PF TTPHQ+ C MC+CYVCD+ APCDHW+ HC   H +   +  R   ++N + P  L
Subjt:  PFPTTPHQTYCEMCYCYVCDAIAPCDHWTSHC---HADQFSKRERRSNSDNNHTPPPL

A0A6J1E9A2 uncharacterized protein LOC1114305662.5e-86100Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP
        MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP

Query:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL
        FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL
Subjt:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL

A0A6J1J202 uncharacterized protein LOC1114826922.1e-7791.61Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP
        MKGAKK+RRLNSKS RMQKEED+EPLRP+LCVKNINKLDLKRFDAM++CYLLDFDPFHSLNQTLSH  SDSDSDVSLVAEKGQVACRDYPHARYLCLK P
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFP

Query:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL
        FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQ  KRERRSNS+NNHTPPP L
Subjt:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL

A0A6J5WUR1 Uncharacterized protein9.8e-3551.06Show/hide
Query:  GAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFH-------SLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYL
        G KK++R+  ++     EED  P+R +LCVK  NK+D+K+F+ +++C++LDFDPF        S++   +  ++    DV++VAEKGQVACRDYPH+R+L
Subjt:  GAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFH-------SLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYL

Query:  CLKFPFPTTPHQTYCEMCYCYVCDAIAPCDHW-TSHCHADQ
        CLKFPF TTPH++YCE+CYCYVCD+ APC  W  +HCHA +
Subjt:  CLKFPFPTTPHQTYCEMCYCYVCDAIAPCDHW-TSHCHADQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20310.1 RPM1 interacting protein 131.6e-2144.9Show/hide
Query:  EECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYCEMCYCYVCDAIAPCDHW------TSHCHADQFSK
        ++C +LD DP  +   T    D D D DV +V +KG++ACRD+PH R+ C K+ F +T H+ YC+MC+CYVCD  APC +W        HCHA+   K
Subjt:  EECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYCEMCYCYVCDAIAPCDHW------TSHCHADQFSK

AT4G27660.1 unknown protein5.9e-3249.3Show/hide
Query:  AKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSD-SDSDSDVSLVAEKGQVACRDYPHARYLCLKFPF
        +K+R+RL   SK  ++EE+  PLR + C+K   + D+K F+  E+C++LDFDP  S + + LS S  S+ D DV++V EKGQVACRD+PH R+LCLKFPF
Subjt:  AKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSD-SDSDSDVSLVAEKGQVACRDYPHARYLCLKFPF

Query:  PTTPHQTYCEMCYCYVCDAIAPCDHWTS-----HCHADQFSK
         ++ H ++C  CYCYVCD +APC +WT+     HC A + SK
Subjt:  PTTPHQTYCEMCYCYVCDAIAPCDHWTS-----HCHADQFSK

AT4G28690.1 BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 (TAIR:AT2G20310.1)1.2e-2142.15Show/hide
Query:  DAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYCEMCYCYVCDAIAPCDHW-------TSHCHADQF
        D  ++C +LDFDP  +  +T+   ++     V +V +KG+VACRD+PH R+ C K+PF +T HQT+CEMC+CYVCD  APC +W       T HCHA+  
Subjt:  DAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYCEMCYCYVCDAIAPCDHW-------TSHCHADQF

Query:  SKR---ERRSNSDNNHTPPPL
         K    +R      N  P P+
Subjt:  SKR---ERRSNSDNNHTPPPL

AT5G54148.1 unknown protein1.7e-2345.83Show/hide
Query:  QKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYCEMCYCY
        +KEEDD PL  + C+K   + D+KRF+  E+C++LDFDPF S + + L+ +D     DV            DYPH R+ CL FPF +TP+ ++C++CYCY
Subjt:  QKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYCEMCYCY

Query:  VCDAIAPCDHW---TSHCHA
        VCD  APC  W   TSHC+A
Subjt:  VCDAIAPCDHW---TSHCHA

AT5G54150.1 unknown protein4.7e-2949.19Show/hide
Query:  SKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYC
        +++ +   EE+  PLR +LCVK   + D+KRF+  E+C++LDF+PF S + + LS S    D D+ ++ E GQVACRDYPH R+LCL FPF +T + T+C
Subjt:  SKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYC

Query:  EMCYCYVCDAIAPCDHW-TSHCHA
        ++CYC+VCD  APC  W +SHC+A
Subjt:  EMCYCYVCDAIAPCDHW-TSHCHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGAGCGAAGAAGCGAAGACGTTTGAATTCAAAGAGCAAGAGAATGCAAAAAGAAGAAGACGATGAGCCCCTCCGACCCATGCTGTGCGTCAAAAACATAAACAA
ATTGGATTTGAAGCGATTCGACGCAATGGAGGAGTGTTACCTCTTGGACTTCGACCCATTCCATTCCCTCAATCAAACGCTCTCTCACTCTGACTCTGACTCTGATTCTG
ACGTCTCGCTGGTGGCTGAAAAGGGTCAGGTGGCCTGTAGAGACTATCCGCACGCCAGGTATTTGTGTCTCAAATTTCCCTTCCCCACGACGCCCCATCAGACTTACTGT
GAGATGTGCTATTGTTACGTCTGCGATGCCATAGCTCCATGCGACCACTGGACGTCACACTGTCATGCCGATCAATTTTCGAAACGGGAAAGGCGATCCAACTCAGACAA
CAACCACACGCCTCCTCCGCTTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGAGCGAAGAAGCGAAGACGTTTGAATTCAAAGAGCAAGAGAATGCAAAAAGAAGAAGACGATGAGCCCCTCCGACCCATGCTGTGCGTCAAAAACATAAACAA
ATTGGATTTGAAGCGATTCGACGCAATGGAGGAGTGTTACCTCTTGGACTTCGACCCATTCCATTCCCTCAATCAAACGCTCTCTCACTCTGACTCTGACTCTGATTCTG
ACGTCTCGCTGGTGGCTGAAAAGGGTCAGGTGGCCTGTAGAGACTATCCGCACGCCAGGTATTTGTGTCTCAAATTTCCCTTCCCCACGACGCCCCATCAGACTTACTGT
GAGATGTGCTATTGTTACGTCTGCGATGCCATAGCTCCATGCGACCACTGGACGTCACACTGTCATGCCGATCAATTTTCGAAACGGGAAAGGCGATCCAACTCAGACAA
CAACCACACGCCTCCTCCGCTTCTGTAGCTTTAGCGTTTCTTCTTCTACATTTTCATCAACAATATTTTGTCGCACCACCAATCCCTCATTTCGAGGAGGGTTTTTTCTA
ACTTATTTTTATCATTATCACTGATCCCCTTCACAACTTCTATGACACCAAATGTATAAATTTCCTATATTTATTCCTGGATCAGTTTTCCAATGCACTATTTCAACTTT
GTAATCTACAAACTGGCACATGATTTCCATGCTAATTGATCCAACCTTTCATTCCA
Protein sequenceShow/hide protein sequence
MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYC
EMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL