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CmoCh16G000470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G000470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationCmo_Chr16:198005..199781
RNA-Seq ExpressionCmoCh16G000470
SyntenyCmoCh16G000470
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576647.1 hypothetical protein SDJN03_24221, partial [Cucurbita argyrosperma subsp. sororia]4.6e-3497.53Show/hide
Query:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
        CD EVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFG+GVDF
Subjt:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
KAG7014698.1 hypothetical protein SDJN02_22327 [Cucurbita argyrosperma subsp. argyrosperma]4.6e-3497.53Show/hide
Query:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
        CD EVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFG+GVDF
Subjt:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
XP_022141079.1 uncharacterized protein LOC111011564 [Momordica charantia]1.2e-3191.25Show/hide
Query:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVD
        CDFEVDYESEKKASIVY AL VDKELQPDKVKREM VSDGKLS+H EAVEARFLRASFSAFVDVLTLATKTIEDFG+G+D
Subjt:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVD
XP_022923038.1 uncharacterized protein LOC111430837 [Cucurbita moschata]6.0e-42100Show/hide
Query:  MLTIPVNPNSLCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
        MLTIPVNPNSLCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
Subjt:  MLTIPVNPNSLCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
XP_023553191.1 uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]2.7e-3497.53Show/hide
Query:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
        CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIH EAVEARFLRASFSAFVDVLTLATKTIEDFG+GVDF
Subjt:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
TrEMBL top hitse value%identityAlignment
A0A0A0L7A2 Uncharacterized protein5.1e-3191.36Show/hide
Query:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
        CDFEVDYESEKKASIVYKALVVDKELQPDKVKR M+ SDGKLSIH EAVEARFLRASFSAFVDVLTLATKTIEDFG+  DF
Subjt:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
A0A6J1CHJ5 uncharacterized protein LOC1110115646.0e-3291.25Show/hide
Query:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVD
        CDFEVDYESEKKASIVY AL VDKELQPDKVKREM VSDGKLS+H EAVEARFLRASFSAFVDVLTLATKTIEDFG+G+D
Subjt:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVD
A0A6J1E8H0 uncharacterized protein LOC1114308372.9e-42100Show/hide
Query:  MLTIPVNPNSLCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
        MLTIPVNPNSLCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
Subjt:  MLTIPVNPNSLCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
A0A6J1G2C3 uncharacterized protein LOC1114500283.9e-3188.89Show/hide
Query:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
        CDFEVD ESEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+H EAVEARFLRAS+SAF+DVLTLA KTIEDFG+G+DF
Subjt:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
A0A6J1HSW7 uncharacterized protein LOC111467483 isoform X14.3e-3081.32Show/hide
Query:  LTIPVNPNSLCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
        L I V   + CDFEVD ESEKKASIVY ALVVDKELQPDKVKR MTVSDGKLS+H EAVEARFLRAS SAF+DVLTLA KTIEDFG+G+DF
Subjt:  LTIPVNPNSLCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein3.5e-2467.53Show/hide
Query:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGR
        C+ +V +ESE+ A I Y +L VDKELQPDKV+R M+VS+ KLS+H EA+EAR LRASFSAFVDVLTLAT+TI++FG+
Subjt:  CDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACCATTCCTGTAAATCCAAACTCCCTGTGTGACTTTGAAGTCGATTATGAGTCAGAGAAGAAAGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGTT
GCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATTCAGTGCTTTTGTAG
ACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACGAGGAGTGGATTTCTGA
mRNA sequenceShow/hide mRNA sequence
TTACAAACCCTAGAAGGCGAAGAAGGCGAAGCAGAAGGCGAAGAGAGGTTATGATGATGCAAGTAGAAATCCATCCGCTTCACCGGCTCCACAGTTTACTGGAAGATGTG
CAGTCCACTGCTCCTACACGACGCCGTTTCTCAAGGGTCCTCTGACTCCCTCTTTGCCATTTCTGTCCTCTAATTATCTAAATCTCAGTGGATAAAGCATGTTAACCATT
CCTGTAAATCCAAACTCCCTGTGTGACTTTGAAGTCGATTATGAGTCAGAGAAGAAAGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGTTGCAGCCAGACAA
GGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATTCAGTGCTTTTGTAGACGTGCTTACTC
TTGCCACAAAAACAATCGAAGATTTCGGACGAGGAGTGGATTTCTGATAGCCTTACATGCCCCTGGCCCTCATATATCAACTGTCACTTTATGCTTAAAATAGCTATCAT
TTTAATTTACTACCTATCTGTAATTTTACCACAATATGATTTGTAGTGGTTTGATCGAGTGTGAAGGTACTCATTCCAACATTGAGATCTA
Protein sequenceShow/hide protein sequence
MLTIPVNPNSLCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGRGVDF