; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G000610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G000610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:275550..277140
RNA-Seq ExpressionCmoCh16G000610
SyntenyCmoCh16G000610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576660.1 Splicing factor SF3a60-like protein, partial [Cucurbita argyrosperma subsp. sororia]8.6e-1685.48Show/hide
Query:  MYNTNSDAKLRLQATEVEAGADSEGVRWVEIHEDKDSARKDEIAALGGQTTSGTNTESDDHE
        MYNTNS AKLRLQATEVEAGADSEG   VEIHEDKDSARKDEIAALGGQTTSGTN  S  H+
Subjt:  MYNTNSDAKLRLQATEVEAGADSEGVRWVEIHEDKDSARKDEIAALGGQTTSGTNTESDDHE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAATACAAACTCCGATGCGAAGCTGCGCCTGCAAGCAACAGAAGTTGAAGCTGGAGCTGATAGCGAGGGAGTGAGGTGGGTAGAGATTCATGAAGACAAG
GATAGTGCCAGGAAAGATGAGATTGCGGCACTTGGAGGGCAAACAACTTCAGGAACCAACACTGAATCAGATGATCATGAGAACAATTCTCATGGTGAACCCTGT
AATCTCTCATTAAGGAGTTATCAAGTGGCGACATATACTGATCTGCAACTCCAGGGATTGATGCAAGATCTAGTAAATAAAAGTGCAGATCCATCTACAGATCGA
AGAATCAGGAGCCTGGAGTCCACATATGTCCCACAGATAAACTTCGACAAATCGAACAATGCCGGTGGAACTTGTGTCCGGACTTCCCGAGTTACATTTCTGGCA
GCATCTATGTCTTCGCTCAGCGGAATGTCGAGACTCATTGTCAAATCAATGTCGCCTGAAATGAGCTTCACTGCTGGGAGGCTGGATGGAAGCTCCTCAAAAGGA
ATCACCTTCCTCCATCTCATGTTAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGTATAATACAAACTCCGATGCGAAGCTGCGCCTGCAAGCAACAGAAGTTGAAGCTGGAGCTGATAGCGAGGGAGTGAGGTGGGTAGAGATTCATGAAGACAAG
GATAGTGCCAGGAAAGATGAGATTGCGGCACTTGGAGGGCAAACAACTTCAGGAACCAACACTGAATCAGATGATCATGAGAACAATTCTCATGGTGAACCCTGT
AATCTCTCATTAAGGAGTTATCAAGTGGCGACATATACTGATCTGCAACTCCAGGGATTGATGCAAGATCTAGTAAATAAAAGTGCAGATCCATCTACAGATCGA
AGAATCAGGAGCCTGGAGTCCACATATGTCCCACAGATAAACTTCGACAAATCGAACAATGCCGGTGGAACTTGTGTCCGGACTTCCCGAGTTACATTTCTGGCA
GCATCTATGTCTTCGCTCAGCGGAATGTCGAGACTCATTGTCAAATCAATGTCGCCTGAAATGAGCTTCACTGCTGGGAGGCTGGATGGAAGCTCCTCAAAAGGA
ATCACCTTCCTCCATCTCATGTTAACATAG
Protein sequenceShow/hide protein sequence
MYNTNSDAKLRLQATEVEAGADSEGVRWVEIHEDKDSARKDEIAALGGQTTSGTNTESDDHENNSHGEPCNLSLRSYQVATYTDLQLQGLMQDLVNKSADPSTDR
RIRSLESTYVPQINFDKSNNAGGTCVRTSRVTFLAASMSSLSGMSRLIVKSMSPEMSFTAGRLDGSSSKGITFLHLMLT