CuGenDBv2

Gene ID	CmoCh16G001380
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	3-hexulose-6-phosphate isomerase
Genome location	Cmo_Chr16:640766..641652
RNA-Seq Expression	CmoCh16G001380
Synteny	CmoCh16G001380
Gene Ontology terms	GO:0016853 - isomerase activity (molecular function)
InterPro domains	IPR017552 - 3-hexulose-6-phosphate isomerase

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8022511.1 hypothetical protein FH972_008303 [Carpinus fangiana]

2.5e-32

54.66

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Query:  TRRPEGRVFLYGVGREGLMLKALCIRLAHLGLSSH-----------------------------------------------QTESGSCVNHADVIFYVP
        T    GRVFLYGVGREGLMLKALC+RLAHLGLS+H                                               Q E+GSCV HA VI YVP
Subjt:  TRRPEGRVFLYGVGREGLMLKALCIRLAHLGLSSH-----------------------------------------------QTESGSCVNHADVIFYVP

Query:  AQSMADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        AQ+MADD +    AVK + +LPMGS YEGALFVLFEMVVY+ GEALGESPE VRSRHTNLE
Subjt:  AQSMADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

KAG7014776.1 hypothetical protein SDJN02_22405, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-37

79.09

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Query:  FSQYRYCPRQFGHRFKDDA---LKPRESPSSDLTRRPEGRVFLYGVGREGLMLKALCIRLAHLGLSSHQTESGSCVNHADVIFYVPAQSMADDEESMTAA
        FS+ R C   F     D A   L   ESPSSDLTRRP+GR+FLYGVGREGLMLKALCIRLAHLGLSSHQTESGSCVNHADVIFYVPAQSMADDEES TAA
Subjt:  FSQYRYCPRQFGHRFKDDA---LKPRESPSSDLTRRPEGRVFLYGVGREGLMLKALCIRLAHLGLSSHQTESGSCVNHADVIFYVPAQSMADDEESMTAA

Query:  VKWQSLLPMG
        VKW+ LLPMG
Subjt:  VKWQSLLPMG

XP_004140780.1 uncharacterized protein LOC101217276 [Cucumis sativus]

4.9e-33

56.69

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Query:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM
        + RVFLYGVGREGLMLKALC+RLAHLGLSSHQ                                                E+GS V +ADVI YVPAQ+M
Subjt:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM

Query:  ADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        ADDEES  AA +W+ LLPMGS YEGALFVLFEMVVY+ GE LGESPE VRSRHTNLE
Subjt:  ADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

XP_022945534.1 uncharacterized protein LOC111449742 [Cucurbita moschata]

1.2e-34

58.86

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Query:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM
        + RVFLYGVGREGLMLKALC+RLAHLGLSSHQ                                                E+GS V HADVI YVPAQ+M
Subjt:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM

Query:  ADDEESMT-AAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        ADDEESMT  AVK + LLPMGS YEGALFVLFEMVVYQ  EALGESPE VRSRHTNLE
Subjt:  ADDEESMT-AAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

XP_022968332.1 uncharacterized protein LOC111467597 [Cucurbita maxima]

1.2e-34

58.86

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Query:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM
        + RVFLYGVGREGLMLKALC+RLAHLGLSSHQ                                                E+GS V HADVI YVPAQ+M
Subjt:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM

Query:  ADDEESMT-AAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        ADDEESMT  AVK + LLPMGS YEGALFVLFEMVVYQ  EALGESPE VRSRHTNLE
Subjt:  ADDEESMT-AAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBC8 3-hexulose-6-phosphate isomerase

2.4e-33

56.69

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Query:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM
        + RVFLYGVGREGLMLKALC+RLAHLGLSSHQ                                                E+GS V +ADVI YVPAQ+M
Subjt:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM

Query:  ADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        ADDEES  AA +W+ LLPMGS YEGALFVLFEMVVY+ GE LGESPE VRSRHTNLE
Subjt:  ADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

A0A5A7SW26 3-hexulose-6-phosphate isomerase

2.6e-32

56.05

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Query:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM
        + RVFLYGVGREGLMLKALC+RLAHLGLSSHQ                                                E+GS V +ADVI YVPAQ+M
Subjt:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM

Query:  ADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        ADDEES  AA + + LLPMGS YEGALFVLFEMVVY+ GE LGESPE VRSRHTNLE
Subjt:  ADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

A0A5N6R1C2 Uncharacterized protein

1.2e-32

54.66

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Query:  TRRPEGRVFLYGVGREGLMLKALCIRLAHLGLSSH-----------------------------------------------QTESGSCVNHADVIFYVP
        T    GRVFLYGVGREGLMLKALC+RLAHLGLS+H                                               Q E+GSCV HA VI YVP
Subjt:  TRRPEGRVFLYGVGREGLMLKALCIRLAHLGLSSH-----------------------------------------------QTESGSCVNHADVIFYVP

Query:  AQSMADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        AQ+MADD +    AVK + +LPMGS YEGALFVLFEMVVY+ GEALGESPE VRSRHTNLE
Subjt:  AQSMADDEESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

A0A6J1G183 uncharacterized protein LOC111449742

5.7e-35

58.86

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Query:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM
        + RVFLYGVGREGLMLKALC+RLAHLGLSSHQ                                                E+GS V HADVI YVPAQ+M
Subjt:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM

Query:  ADDEESMT-AAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        ADDEESMT  AVK + LLPMGS YEGALFVLFEMVVYQ  EALGESPE VRSRHTNLE
Subjt:  ADDEESMT-AAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

A0A6J1HTB3 uncharacterized protein LOC111467597

5.7e-35

58.86

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Query:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM
        + RVFLYGVGREGLMLKALC+RLAHLGLSSHQ                                                E+GS V HADVI YVPAQ+M
Subjt:  EGRVFLYGVGREGLMLKALCIRLAHLGLSSHQT-----------------------------------------------ESGSCVNHADVIFYVPAQSM

Query:  ADDEESMT-AAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        ADDEESMT  AVK + LLPMGS YEGALFVLFEMVVYQ  EALGESPE VRSRHTNLE
Subjt:  ADDEESMT-AAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G52190.1 Sugar isomerase (SIS) family protein

6.2e-26

44.38

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Query:  RPEGRVFLYGVGREGLMLKALCIRLAHLGLSSH-----------------------------------------------QTESGSCVNHADVIFYVPAQ
        R   R+FLYGVGREGLMLKA  +RL H GL +H                                               +   GSCV HA  + YVPAQ
Subjt:  RPEGRVFLYGVGREGLMLKALCIRLAHLGLSSH-----------------------------------------------QTESGSCVNHADVIFYVPAQ

Query:  SMADDE-ESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE
        +MA D     +  +  + LLPMGS YEGALFVLFEMVVY+ GE LGES E+VR+RHTNLE
Subjt:  SMADDE-ESMTAAVKWQSLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

Sequences

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CDS sequence

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ATGCCGCAATTGCAAAGCAACGTTCTCTTCTCCCAATACCGATATTGCCCCCGCCAATTTGGCCATAGGTTTAAAGACGATGCGTTGAAACCGAGAGAGTCACCATCAAG
CGACCTCACGCGCCGCCCGGAAGGACGGGTGTTCCTCTACGGTGTCGGCCGTGAAGGCCTAATGCTCAAAGCCCTCTGTATACGGCTAGCTCATCTCGGCCTCTCGTCGC
ACCAGACGGAGAGCGGCTCGTGTGTTAATCACGCCGATGTGATTTTCTACGTTCCGGCGCAGAGCATGGCGGACGATGAGGAATCGATGACGGCGGCGGTGAAATGGCAG
TCTCTGCTTCCGATGGGAAGTTCGTATGAAGGAGCTCTGTTTGTTTTGTTTGAAATGGTGGTATATCAACAGGGTGAGGCGTTGGGAGAAAGCCCCGAGACCGTCCGATC
ACGCCACACCAATCTTGAATGA

mRNA sequence

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Protein sequence

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MPQLQSNVLFSQYRYCPRQFGHRFKDDALKPRESPSSDLTRRPEGRVFLYGVGREGLMLKALCIRLAHLGLSSHQTESGSCVNHADVIFYVPAQSMADDEESMTAAVKWQ
SLLPMGSSYEGALFVLFEMVVYQQGEALGESPETVRSRHTNLE

CmoCh16G001380 (gene) of Cucurbita moschata (Rifu) v1 genome