; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G001400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G001400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionC5a peptidase
Genome locationCmo_Chr16:642931..644329
RNA-Seq ExpressionCmoCh16G001400
SyntenyCmoCh16G001400
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576732.1 hypothetical protein SDJN03_24306, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5485.51Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT
        MESHVQFS+TKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRL+LDRHLSDTADSTLDSPQKNRKKHSIS         TRMDGRSSRRSRRIPSLPHT
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT

Query:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        SIQDQ         VVPQMEERAVEDEDERDHPMSPVN
Subjt:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

KAG7014778.1 hypothetical protein SDJN02_22407 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-5586.96Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRL+LDRHLSDTADSTLDSPQKNRKKHSISG        TRMDGRSSRRSRRIPSLPHT
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT

Query:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        SIQDQ         VVPQMEERAVEDEDERDHPMSPVN
Subjt:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

XP_022923139.1 uncharacterized protein LOC111430892 isoform X1 [Cucurbita moschata]4.1e-5586.96Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSIS         TRMDGRSSRRSRRIPSLPHT
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT

Query:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        SIQDQ         VVPQMEERAVEDEDERDHPMSPVN
Subjt:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

XP_022923140.1 uncharacterized protein LOC111430892 isoform X2 [Cucurbita moschata]4.9e-5687.68Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISG        TRMDGRSSRRSRRIPSLPHT
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT

Query:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        SIQDQ         VVPQMEERAVEDEDERDHPMSPVN
Subjt:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

XP_022984701.1 uncharacterized protein LOC111482903 isoform X2 [Cucurbita maxima]1.2e-5485.51Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRN+RRRL+LDRHLSDTADSTLDSPQKNRKKHSISG        TRMDGRSSRRSRRIPSLPHT
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT

Query:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        SIQDQ         VVPQMEERAVEDEDERDHP+SPVN
Subjt:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

TrEMBL top hitse value%identityAlignment
A0A6J1CHV7 uncharacterized protein LOC1110116401.4e-4069.78Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNY-RRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPH
        MESHVQF+ET   WTNEKHMHFLNSMEASFVRSMF+NR + RRRL+LDRHL DT+DSTLDSPQK+RK H+ SG          +DGRSS RSR   SLPH
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNY-RRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPH

Query:  TSIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        TS QDQ         VVPQME+RAVEDEDERDHPMSP+N
Subjt:  TSIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

A0A6J1E5I2 uncharacterized protein LOC111430892 isoform X12.0e-5586.96Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSIS         TRMDGRSSRRSRRIPSLPHT
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT

Query:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        SIQDQ         VVPQMEERAVEDEDERDHPMSPVN
Subjt:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

A0A6J1EAV1 uncharacterized protein LOC111430892 isoform X22.4e-5687.68Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISG        TRMDGRSSRRSRRIPSLPHT
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT

Query:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        SIQDQ         VVPQMEERAVEDEDERDHPMSPVN
Subjt:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

A0A6J1J606 uncharacterized protein LOC111482903 isoform X25.8e-5585.51Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRN+RRRL+LDRHLSDTADSTLDSPQKNRKKHSISG        TRMDGRSSRRSRRIPSLPHT
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT

Query:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        SIQDQ         VVPQMEERAVEDEDERDHP+SPVN
Subjt:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X14.9e-5484.78Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRN+RRRL+LDRHLSDTADSTLDSPQKNRKKHSIS         TRMDGRSSRRSRRIPSLPHT
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHT

Query:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN
        SIQDQ         VVPQMEERAVEDEDERDHP+SPVN
Subjt:  SIQDQVIINMCNSLVVPQMEERAVEDEDERDHPMSPVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAA
TCGGAACTATCGCCGCCGTCTACAGCTGGACCGCCACCTGTCGGACACCGCAGACTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTGAGT
TTAATGTTAGCGTTTTTTGTACCAGAATGGACGGTAGATCTAGCAGGAGATCAAGACGGATACCATCTCTACCGCACACTTCAATTCAAGATCAGGTCATTATAAATATG
TGCAACTCTCTTGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAA
TCGGAACTATCGCCGCCGTCTACAGCTGGACCGCCACCTGTCGGACACCGCAGACTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTGAGT
TTAATGTTAGCGTTTTTTGTACCAGAATGGACGGTAGATCTAGCAGGAGATCAAGACGGATACCATCTCTACCGCACACTTCAATTCAAGATCAGGTCATTATAAATATG
TGCAACTCTCTTGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTAATAAATATAGTATTAATTATTATT
ATTATTTCAGCTGCATCTTTTTCCCATTTAGTTTCTTCATTTAATCCTCGTGTCTTTTCACTTAGTTTATTAATCTTCAATTAATGATGGGAAATGAGTGAAGGCGTTAA
TTTAATTGGCTACCTCAGGTAGGTTAAATACAATAAACGAAGAAGAGGGTGAAATTGTAAATAAAGGGAATATTCAAAGATATATATATATATATATTTTTTTTAATATG
TTTTTTATTTTCCAAGATCATAAAAGACCATGTGGGGTTATAGCAATAGGAAAAGGGAGTCCATCGCCAACTCTGATTGGGAATATACTATAAGATAATATAATATAAAT
GATAGTATAGTGAAAGGAAGATATTTTATTTGGCAATGTGGGGTTGATTTGATTATGA
Protein sequenceShow/hide protein sequence
MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDSPQKNRKKHSISGEFNVSVFCTRMDGRSSRRSRRIPSLPHTSIQDQVIINM
CNSLVVPQMEERAVEDEDERDHPMSPVN