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CmoCh16G001960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G001960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:868830..869346
RNA-Seq ExpressionCmoCh16G001960
SyntenyCmoCh16G001960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067676.1 hypothetical protein E6C27_scaffold70G00450 [Cucumis melo var. makuwa]3.3e-1461.76Show/hide
Query:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT
        MQ+ N ++QRQSIT QLRNV NP PNR LNA+L  LPLKP  T G I + GA+PCLNI H E+++ AT
Subjt:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT

KAA0067677.1 hypothetical protein E6C27_scaffold70G00470 [Cucumis melo var. makuwa]4.0e-1563.24Show/hide
Query:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT
        MQ+ +P++QRQSIT QLRNV NP PNR LNA+L  LPLKP  T G I + GA+PCLNI H EI++ AT
Subjt:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT

TrEMBL top hitse value%identityAlignment
A0A0A0L5L7 Uncharacterized protein5.2e-1357.35Show/hide
Query:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT
        MQ+ N ++QRQS+T QLRNV N  PNR LNA++  LPLKP  T G I + GA+PCLNI H E+++ AT
Subjt:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT

A0A0A0L9G9 Uncharacterized protein8.9e-1357.35Show/hide
Query:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT
        MQ+  P++QRQSIT QLRNV N  PNR LNA++  LPLKP  T G I + GA+PCLNI H E+++ +T
Subjt:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT

A0A5A7VKH2 Uncharacterized protein1.9e-1563.24Show/hide
Query:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT
        MQ+ +P++QRQSIT QLRNV NP PNR LNA+L  LPLKP  T G I + GA+PCLNI H EI++ AT
Subjt:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT

A0A5A7VMC4 Uncharacterized protein1.6e-1461.76Show/hide
Query:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT
        MQ+ N ++QRQSIT QLRNV NP PNR LNA+L  LPLKP  T G I + GA+PCLNI H E+++ AT
Subjt:  MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTCTGCAATCCGGTTGATCAAAGACAGAGCATTACTGGTCAACTGCGCAATGTTCACAATCCTCCTCCTAACCGCCGCCTTAACGCCGCCCTTGACAGC
CTTCCCTTGAAACCCCTCACTACAAGTGGTCTCATCAGTGAGGGCGGCGCTGACCCATGTCTGAACATCGCTCATAACGAGATCAAAGTCATGGCCACCTTGGGC
ATCTCGGAAATGGAGCTGGCAAGGGAGTCAACAGAGTCACTGAGCTCTTCCAAACAGTCGTTAAGAGCAGAGACGTCTCTTGGAGGGAGGCCGTGGGCGTGGGAG
AGCTTGAGGATTTGGGTGGCGGCGGACTTGACGGAGGAGAGGGTGACAGAGAGGGCGGTGGTGGCCAAAAGGCGAGGGCTTGTTTGGATGGAATTGGCGTGGATT
GAAAGAGATGAGAAACAGAGTCGAGGGTATTTAGTGGAAGTGCAAGAAGTTCTTATGAACTGTGTGCTGCTTTGTGGAGTGATGGCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCTCTGCAATCCGGTTGATCAAAGACAGAGCATTACTGGTCAACTGCGCAATGTTCACAATCCTCCTCCTAACCGCCGCCTTAACGCCGCCCTTGACAGC
CTTCCCTTGAAACCCCTCACTACAAGTGGTCTCATCAGTGAGGGCGGCGCTGACCCATGTCTGAACATCGCTCATAACGAGATCAAAGTCATGGCCACCTTGGGC
ATCTCGGAAATGGAGCTGGCAAGGGAGTCAACAGAGTCACTGAGCTCTTCCAAACAGTCGTTAAGAGCAGAGACGTCTCTTGGAGGGAGGCCGTGGGCGTGGGAG
AGCTTGAGGATTTGGGTGGCGGCGGACTTGACGGAGGAGAGGGTGACAGAGAGGGCGGTGGTGGCCAAAAGGCGAGGGCTTGTTTGGATGGAATTGGCGTGGATT
GAAAGAGATGAGAAACAGAGTCGAGGGTATTTAGTGGAAGTGCAAGAAGTTCTTATGAACTGTGTGCTGCTTTGTGGAGTGATGGCTGAATGA
Protein sequenceShow/hide protein sequence
MQLCNPVDQRQSITGQLRNVHNPPPNRRLNAALDSLPLKPLTTSGLISEGGADPCLNIAHNEIKVMATLGISEMELARESTESLSSSKQSLRAETSLGGRPWAWE
SLRIWVAADLTEERVTERAVVAKRRGLVWMELAWIERDEKQSRGYLVEVQEVLMNCVLLCGVMAE