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CmoCh16G001990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G001990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:876925..878952
RNA-Seq ExpressionCmoCh16G001990
SyntenyCmoCh16G001990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7824807.1 putative pectinesterase/pectinesterase inhibitor 24 [Senna tora]1.6e-0437.14Show/hide
Query:  IAKYKIYSAVNITLLIELSSKMDMKGFLIPLKGTTVEDRKICARSESNCLMVSRTSGVPECDASGYKSFT
        IAKY++Y A+++T  +EL   M ++G L+PL+   VE R++      + L++ R   VPECD   Y+ F+
Subjt:  IAKYKIYSAVNITLLIELSSKMDMKGFLIPLKGTTVEDRKICARSESNCLMVSRTSGVPECDASGYKSFT
KAG7014823.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-1197.5Show/hide
Query:  RKNVENLFSKRSEWDLCLATITALQMKFLTVKGDTSIELL
        RKNVENLFSK SEWDLCLATITALQMKFLTVKGDTSIELL
Subjt:  RKNVENLFSKRSEWDLCLATITALQMKFLTVKGDTSIELL
TrEMBL top hitse value%identityAlignment
A0A7I8KMV6 Hypothetical protein8.5e-0432.26Show/hide
Query:  FLTVKGDTSIE---LLNNCSIAKYKIYSAVNITLLIELSSKMDMKGFLIPLKGTTVEDRKICARSESNCLMVSRTSGVPECDASGYKSFTCHR
        FL  +  + +E   L N+ S+A+ +++ AV++ L +EL+  + ++G L+PLK   VE R +   ++ + LM+ R   VPE D  G++    HR
Subjt:  FLTVKGDTSIE---LLNNCSIAKYKIYSAVNITLLIELSSKMDMKGFLIPLKGTTVEDRKICARSESNCLMVSRTSGVPECDASGYKSFTCHR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAGATCCTTCCTGATATCAAAGATGGACAAATGGGCTATGTTCAAAAGATATATAGAGAGATTAAAGAATCAAATGACGTGAGGAAGAATGTAGAAAACCTATT
CTCCAAGCGGAGTGAATGGGACCTCTGTCTGGCAACAATAACTGCCTTGCAAATGAAATTTTTGACGGTGAAAGGCGATACCTCCATTGAATTGCTTAATAACTGCAGCA
TTGCCAAATATAAAATCTACAGTGCCGTAAATATAACACTACTTATAGAGCTGTCTTCGAAAATGGACATGAAGGGTTTCTTGATACCCTTGAAAGGCACAACGGTAGAA
GACAGAAAGATCTGCGCCAGATCGGAGAGCAATTGCTTGATGGTTTCCAGGACCAGTGGTGTTCCGGAATGTGATGCCTCGGGCTATAAATCCTTCACCTGTCACCGCTG
A
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAGATCCTTCCTGATATCAAAGATGGACAAATGGGCTATGTTCAAAAGATATATAGAGAGATTAAAGAATCAAATGACGTGAGGAAGAATGTAGAAAACCTATT
CTCCAAGCGGAGTGAATGGGACCTCTGTCTGGCAACAATAACTGCCTTGCAAATGAAATTTTTGACGGTGAAAGGCGATACCTCCATTGAATTGCTTAATAACTGCAGCA
TTGCCAAATATAAAATCTACAGTGCCGTAAATATAACACTACTTATAGAGCTGTCTTCGAAAATGGACATGAAGGGTTTCTTGATACCCTTGAAAGGCACAACGGTAGAA
GACAGAAAGATCTGCGCCAGATCGGAGAGCAATTGCTTGATGGTTTCCAGGACCAGTGGTGTTCCGGAATGTGATGCCTCGGGCTATAAATCCTTCACCTGTCACCGCTG
A
Protein sequenceShow/hide protein sequence
MSEILPDIKDGQMGYVQKIYREIKESNDVRKNVENLFSKRSEWDLCLATITALQMKFLTVKGDTSIELLNNCSIAKYKIYSAVNITLLIELSSKMDMKGFLIPLKGTTVE
DRKICARSESNCLMVSRTSGVPECDASGYKSFTCHR