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CmoCh16G002100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G002100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:926384..926725
RNA-Seq ExpressionCmoCh16G002100
SyntenyCmoCh16G002100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]5.5e-3496.43Show/hide
Query:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPPHSS
        MASPTALVAWKKVAFL FLLIAVSVSARELAGANVVTRTAREMA  PNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPPHSS
Subjt:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPPHSS
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]4.6e-1765.43Show/hide
Query:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPP
        MASP+A V WK+V F A LL+A +VSAREL G N+V RT  EM  E N    G RLIARQLDT+W G+YSPPPPR PPPPP
Subjt:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPP
KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-3395.24Show/hide
Query:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPPHSS
        MASPTALVAWKKVAFL FLLIAVSVSARELAGANVVTRTAREMA  PNGVI GSRLIARQLDTAWRGHYSPPPPRSPPPPPHSS
Subjt:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPPHSS
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-1664.2Show/hide
Query:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPP
        MASP+A V WK+V F A LL+A +VSAREL G N+V RT  EM  E N    G RLIARQLDT+W G+YSPPPPR  PPPP
Subjt:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPP
KGN57261.1 hypothetical protein Csa_010292 [Cucumis sativus]5.3e-0546.91Show/hide
Query:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPP
        MA+P  LV      F + LL+A + S        V+ R AREM A       G +L ARQLDT+W+G+YSPPPP  PPPPP
Subjt:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPP
TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein1.7e-0453.66Show/hide
Query:  MASPT-ALVAWKKV-AFLAFLLIAVSVSARELAGANVVTRTARE--MAAEPNGVIGGSRLIARQLDTAWRGHYSPP--PPRS
        MA+ T A VAWKKV  F   LL+A ++SAREL     V RT  E  +  E N VI   RL  RQLDT+WRG+Y PP  PPRS
Subjt:  MASPT-ALVAWKKV-AFLAFLLIAVSVSARELAGANVVTRTARE--MAAEPNGVIGGSRLIARQLDTAWRGHYSPP--PPRS
A0A0A0LB11 Uncharacterized protein2.6e-0546.91Show/hide
Query:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPP
        MA+P  LV      F + LL+A + S        V+ R AREM A       G +L ARQLDT+W+G+YSPPPP  PPPPP
Subjt:  MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACCTACAGCTTTGGTTGCTTGGAAGAAGGTTGCCTTCTTGGCTTTCCTTCTTATTGCTGTCAGTGTTTCTGCAAGAGAACTTGCTGGGGCTAACGTTGTCAC
ACGCACAGCCCGTGAGATGGCGGCGGAGCCCAATGGTGTGATAGGAGGCAGCAGATTAATAGCTCGACAATTGGATACCGCTTGGAGAGGACATTATTCTCCTCCTCCTC
CTCGTTCTCCTCCTCCTCCTCCCCATTCCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCACCTACAGCTTTGGTTGCTTGGAAGAAGGTTGCCTTCTTGGCTTTCCTTCTTATTGCTGTCAGTGTTTCTGCAAGAGAACTTGCTGGGGCTAACGTTGTCAC
ACGCACAGCCCGTGAGATGGCGGCGGAGCCCAATGGTGTGATAGGAGGCAGCAGATTAATAGCTCGACAATTGGATACCGCTTGGAGAGGACATTATTCTCCTCCTCCTC
CTCGTTCTCCTCCTCCTCCTCCCCATTCCTCCTAA
Protein sequenceShow/hide protein sequence
MASPTALVAWKKVAFLAFLLIAVSVSARELAGANVVTRTAREMAAEPNGVIGGSRLIARQLDTAWRGHYSPPPPRSPPPPPHSS