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CmoCh16G002110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G002110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:927790..928292
RNA-Seq ExpressionCmoCh16G002110
SyntenyCmoCh16G002110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067663.1 hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa]7.7e-0648.1Show/hide
Query:  IRISLLLRLLFFA--LLLVASTASTANSKALLHFPRTRKMAMEDGQVGKGT----SKKPTADDVPWGGGYV--PPILSN
        ++ISL+L+LLFFA  L + ++T S  N+  LLH P  RKM +E  +  K        +PT+DDVPWGGGYV  PPIL++
Subjt:  IRISLLLRLLFFA--LLLVASTASTANSKALLHFPRTRKMAMEDGQVGKGT----SKKPTADDVPWGGGYV--PPILSN

KAE8650426.1 hypothetical protein Csa_009889 [Cucumis sativus]8.3e-0852.38Show/hide
Query:  MASPRRIRISLLLRLLFFALLLVASTASTANS--KALLHFPRTRKMAME----DGQVGKGTSK-KPTADDVPWGGGYVPPILSN
        MASP   RI LLL+LLFF+LLL+ ST ST N+  + L H PR RK+ ++    DG+ G      KPT++D PWGGGY+ P LSN
Subjt:  MASPRRIRISLLLRLLFFALLLVASTASTANS--KALLHFPRTRKMAME----DGQVGKGTSK-KPTADDVPWGGGYVPPILSN

KAE8650427.1 hypothetical protein Csa_010020 [Cucumis sativus]1.1e-0450.63Show/hide
Query:  IRISLLLRLLFFALLL--VASTASTANSKALLHFPRTRKMAM--EDGQVGKGTSK--KPTADDVPWGGGYV--PPILSN
        ++ISL+L+LLFFA LL    +T S  N+  LLH P  RKMA+    G+      K  KPT+ D PWGGGYV  PPIL+N
Subjt:  IRISLLLRLLFFALLL--VASTASTANSKALLHFPRTRKMAM--EDGQVGKGTSK--KPTADDVPWGGGYV--PPILSN

KAG6576805.1 hypothetical protein SDJN03_24379, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1497.56Show/hide
Query:  PRTRKMAMEDGQVGKGTSKKPTADDVPWGGGYVPPILSNHP
        PRTRKMAME GQVGKGTSKKPTADDVPWGGGYVPPILSNHP
Subjt:  PRTRKMAMEDGQVGKGTSKKPTADDVPWGGGYVPPILSNHP

KAG7014832.1 hypothetical protein SDJN02_22461 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3094.94Show/hide
Query:  MASPRRIRISLLLRLLFFALLLVASTASTANSKALLHFPRTRKMAMEDGQVGKGTSKKPTADDVPWGGGYVPPILSNHP
        MASPRRIRISLLLRLLFFALLLVASTAS ANSKALLH PRT KMAME GQVGKGTSKKPTADDVPWGGGYVPPILSNHP
Subjt:  MASPRRIRISLLLRLLFFALLLVASTASTANSKALLHFPRTRKMAMEDGQVGKGTSKKPTADDVPWGGGYVPPILSNHP

TrEMBL top hitse value%identityAlignment
A0A0A0L653 Uncharacterized protein4.0e-0852.38Show/hide
Query:  MASPRRIRISLLLRLLFFALLLVASTASTANS--KALLHFPRTRKMAME----DGQVGKGTSK-KPTADDVPWGGGYVPPILSN
        MASP   RI LLL+LLFF+LLL+ ST ST N+  + L H PR RK+ ++    DG+ G      KPT++D PWGGGY+ P LSN
Subjt:  MASPRRIRISLLLRLLFFALLLVASTASTANS--KALLHFPRTRKMAME----DGQVGKGTSK-KPTADDVPWGGGYVPPILSN

A0A0A0L8B2 Uncharacterized protein5.4e-0550.63Show/hide
Query:  IRISLLLRLLFFALLL--VASTASTANSKALLHFPRTRKMAM--EDGQVGKGTSK--KPTADDVPWGGGYV--PPILSN
        ++ISL+L+LLFFA LL    +T S  N+  LLH P  RKMA+    G+      K  KPT+ D PWGGGYV  PPIL+N
Subjt:  IRISLLLRLLFFALLL--VASTASTANSKALLHFPRTRKMAM--EDGQVGKGTSK--KPTADDVPWGGGYV--PPILSN

A0A5D3DJ60 Uncharacterized protein3.7e-0648.1Show/hide
Query:  IRISLLLRLLFFA--LLLVASTASTANSKALLHFPRTRKMAMEDGQVGKGT----SKKPTADDVPWGGGYV--PPILSN
        ++ISL+L+LLFFA  L + ++T S  N+  LLH P  RKM +E  +  K        +PT+DDVPWGGGYV  PPIL++
Subjt:  IRISLLLRLLFFA--LLLVASTASTANSKALLHFPRTRKMAMEDGQVGKGT----SKKPTADDVPWGGGYV--PPILSN

A0A6J1CHY3 uncharacterized protein LOC1110118037.8e-0447.3Show/hide
Query:  IRISLLLRLLFFALLLVASTASTANSKALLHFPRTRKMAMEDGQVGKGTSK-KPTADDVPWGGGYVPPILSNHP
        +RIS +L+L FFALLL+AS  S A++ ++   PR RK+ ME   VGK   + K  + D PW GGY PP  +N+P
Subjt:  IRISLLLRLLFFALLLVASTASTANSKALLHFPRTRKMAMEDGQVGKGTSK-KPTADDVPWGGGYVPPILSNHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCCCCAGGAGGATCCGGATTTCCCTTCTCTTGAGGCTGCTTTTCTTTGCTTTGCTTCTCGTTGCCTCTACTGCTTCTACAGCCAACAGCAAGGCTTTGCTCCA
CTTTCCTCGTACTCGCAAAATGGCGATGGAGGACGGACAGGTTGGGAAGGGTACATCAAAGAAACCAACTGCTGATGATGTCCCATGGGGAGGAGGCTATGTTCCTCCCA
TATTAAGCAACCACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCCCCAGGAGGATCCGGATTTCCCTTCTCTTGAGGCTGCTTTTCTTTGCTTTGCTTCTCGTTGCCTCTACTGCTTCTACAGCCAACAGCAAGGCTTTGCTCCA
CTTTCCTCGTACTCGCAAAATGGCGATGGAGGACGGACAGGTTGGGAAGGGTACATCAAAGAAACCAACTGCTGATGATGTCCCATGGGGAGGAGGCTATGTTCCTCCCA
TATTAAGCAACCACCCTTGATACCTCATTTGTTTGGATCAGCTCTGTGTTCTTCTTTTTGTTGCTGTTCTTGTCTTTTGGGGAGCATCCCATCCTATCTTATGTTCTTCA
CCCTACAATAACTTTAATGTTTCTCTTTTCTTTTTTATTTTAATGGAACGTTATATTACGTAACAAAATCTACCTCGTTTGTGAACA
Protein sequenceShow/hide protein sequence
MASPRRIRISLLLRLLFFALLLVASTASTANSKALLHFPRTRKMAMEDGQVGKGTSKKPTADDVPWGGGYVPPILSNHP