; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G002390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G002390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger CCCH domain-containing protein 54
Genome locationCmo_Chr16:1052957..1053613
RNA-Seq ExpressionCmoCh16G002390
SyntenyCmoCh16G002390
Gene Ontology termsGO:0006349 - regulation of gene expression by genetic imprinting (biological process)
GO:0006807 - nitrogen compound metabolic process (biological process)
GO:0009910 - negative regulation of flower development (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0031490 - chromatin DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576828.1 Zinc finger CCCH domain-containing protein 54, partial [Cucurbita argyrosperma subsp. sororia]6.9e-12199.05Show/hide
Query:  INDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEF
        +NDVYGHEFTAVALPEF YRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEF
Subjt:  INDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEF

Query:  AHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSELEASEFELP
        AHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSELEASEFELP
Subjt:  AHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSELEASEFELP

Query:  HIEWISELLQ
        HIEWISELLQ
Subjt:  HIEWISELLQ

XP_008454474.1 PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo]8.4e-9575.69Show/hide
Query:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
        M QGFVFGINDVYGHEF+AV+LPE    N  LT + DDTA+F++DEFRMY++KIQRCP++RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSC
Subjt:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC

Query:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
        PKGDFCEFAHGVFE+WLHP RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   R A+AA+E P E KNDG+ EIP +E   G  NERS   
Subjt:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL

Query:  EASEFELPHIEWISELLQ
        + SE ELPHIEWISELL+
Subjt:  EASEFELPHIEWISELLQ

XP_022922815.1 zinc finger CCCH domain-containing protein 54 [Cucurbita moschata]1.4e-126100Show/hide
Query:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
        MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
Subjt:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC

Query:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
        PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
Subjt:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL

Query:  EASEFELPHIEWISELLQ
        EASEFELPHIEWISELLQ
Subjt:  EASEFELPHIEWISELLQ

XP_022985508.1 zinc finger CCCH domain-containing protein 54 [Cucurbita maxima]8.1e-12296.79Show/hide
Query:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
        M QGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQT+DTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
Subjt:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC

Query:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
        PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETK KLHF APV RAALAAL+YPVERKNDGVSEIPVKEISDGLGNERSSEL
Subjt:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL

Query:  EASEFELPHIEWISELLQ
        EASE ELPHIEWISELLQ
Subjt:  EASEFELPHIEWISELLQ

XP_023553083.1 zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo]4.2e-12699.54Show/hide
Query:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
        MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
Subjt:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC

Query:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
        PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVAR ALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
Subjt:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL

Query:  EASEFELPHIEWISELLQ
        EASEFELPHIEWISELLQ
Subjt:  EASEFELPHIEWISELLQ

TrEMBL top hitse value%identityAlignment
A0A1S3BYP8 zinc finger CCCH domain-containing protein 544.1e-9575.69Show/hide
Query:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
        M QGFVFGINDVYGHEF+AV+LPE    N  LT + DDTA+F++DEFRMY++KIQRCP++RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSC
Subjt:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC

Query:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
        PKGDFCEFAHGVFE+WLHP RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   R A+AA+E P E KNDG+ EIP +E   G  NERS   
Subjt:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL

Query:  EASEFELPHIEWISELLQ
        + SE ELPHIEWISELL+
Subjt:  EASEFELPHIEWISELLQ

A0A5A7TRB5 Zinc finger CCCH domain-containing protein 544.1e-9575.69Show/hide
Query:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
        M QGFVFGINDVYGHEF+AV+LPE    N  LT + DDTA+F++DEFRMY++KIQRCP++RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSC
Subjt:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC

Query:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
        PKGDFCEFAHGVFE+WLHP RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   R A+AA+E P E KNDG+ EIP +E   G  NERS   
Subjt:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL

Query:  EASEFELPHIEWISELLQ
        + SE ELPHIEWISELL+
Subjt:  EASEFELPHIEWISELLQ

A0A6J1CJI1 zinc finger CCCH domain-containing protein 54 isoform X11.5e-7362.56Show/hide
Query:  MLQGFVFGIND-VYGHEFTAVALPEFAYRNTRLTPQTDD-TALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTG
        M QGF  GIN+ V+ H+F+            +L  Q +D  A+F SDEFRM+A+KIQRCP++RSHDWTECPYAHRGEKAQRRD RRFNYSAVACPAFR G
Subjt:  MLQGFVFGIND-VYGHEFTAVALPEFAYRNTRLTPQTDD-TALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTG

Query:  SCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEI-------PVKEISDG
        +CP+GDFCE+AHGVFE+WLHP RYRTRACNAGRFCQRKVCFFAH+PE+LR ETK K HF+A   R  + A+E P+E KND VS I        V+EI + 
Subjt:  SCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEI-------PVKEISDG

Query:  LGNERSSELEASEFELPHIEWISELLQ
          N+R+   E S+ +LPHI WI ELLQ
Subjt:  LGNERSSELEASEFELPHIEWISELLQ

A0A6J1E9W0 zinc finger CCCH domain-containing protein 546.9e-127100Show/hide
Query:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
        MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
Subjt:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC

Query:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
        PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
Subjt:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL

Query:  EASEFELPHIEWISELLQ
        EASEFELPHIEWISELLQ
Subjt:  EASEFELPHIEWISELLQ

A0A6J1JDT4 zinc finger CCCH domain-containing protein 543.9e-12296.79Show/hide
Query:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
        M QGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQT+DTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC
Subjt:  MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSC

Query:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL
        PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETK KLHF APV RAALAAL+YPVERKNDGVSEIPVKEISDGLGNERSSEL
Subjt:  PKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSEL

Query:  EASEFELPHIEWISELLQ
        EASE ELPHIEWISELLQ
Subjt:  EASEFELPHIEWISELLQ

SwissProt top hitse value%identityAlignment
O65036 Zinc finger CCCH domain-containing protein 543.1e-5553.05Show/hide
Query:  AYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTR
        AY      P  DD A++ SDEFRMYA+KI+RCP++RSHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR G+C +GD CEFAHGVFE+WLHP RYRTR
Subjt:  AYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTR

Query:  ACNAGRFCQRKVCFFAHSPEELR-PETKLKLHFDAPVARAALAALEYPVERKND----GVSEIPVKEISDGLGNERSSEL--------------EAS--E
        ACNAG  CQRKVCFFAH+PE+LR  E K +  +     RA        V  + D      S  PV+   D L +     L              E S  +
Subjt:  ACNAGRFCQRKVCFFAHSPEELR-PETKLKLHFDAPVARAALAALEYPVERKND----GVSEIPVKEISDGLGNERSSEL--------------EAS--E

Query:  FELPHIEWISELL
         +L H +WISEL+
Subjt:  FELPHIEWISELL

O82199 Zinc finger CCCH domain-containing protein 203.5e-4366.36Show/hide
Query:  FNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFA
        +  D FRMY FK++RC + RSHDWTECPYAH GEKA+RRDPR+F+YS  ACP FR G C +GD CEF+HGVFE WLHP RYRT+ C  G  C+R+VCFFA
Subjt:  FNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFA

Query:  HSPEELR
        HSP+++R
Subjt:  HSPEELR

O82307 Zinc finger CCCH domain-containing protein 231.9e-4465.52Show/hide
Query:  TPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRF
        +P TD    F+SDEFR+Y FKI+RC + RSHDWTECP+AH GEKA+RRDPR+F+YS  ACP FR GSC +GD CEF+HGVFE WLHP+RYRT+ C  G  
Subjt:  TPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRF

Query:  CQRKVCFFAHSPEELR
        C+R++CFFAH+ E+LR
Subjt:  CQRKVCFFAHSPEELR

Q6L4N4 Zinc finger CCCH domain-containing protein 353.5e-4369.23Show/hide
Query:  DEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSP
        DEFRMY FK++RC + RSHDWTECP+AH GEKA+RRDPRR+ YS  ACP FR G C +GD CEFAHGVFE WLHP RYRT+ C  G  C+R+VCFFAH+P
Subjt:  DEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSP

Query:  EELR
        ++LR
Subjt:  EELR

Q9M0G2 Zinc finger CCCH domain-containing protein 491.2e-4368.22Show/hide
Query:  FNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFA
        ++ D FRMY FK++RC + RSHDWTECPYAH GEKA+RRDPR+++YS  ACP FR G C KGD CEFAHGVFE WLHP RYRT+ C  G  C RK+CFFA
Subjt:  FNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFA

Query:  HSPEELR
        HSP++LR
Subjt:  HSPEELR

Arabidopsis top hitse value%identityAlignment
AT2G19810.1 CCCH-type zinc finger family protein2.5e-4466.36Show/hide
Query:  FNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFA
        +  D FRMY FK++RC + RSHDWTECPYAH GEKA+RRDPR+F+YS  ACP FR G C +GD CEF+HGVFE WLHP RYRT+ C  G  C+R+VCFFA
Subjt:  FNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFA

Query:  HSPEELR
        HSP+++R
Subjt:  HSPEELR

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.3e-4565.52Show/hide
Query:  TPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRF
        +P TD    F+SDEFR+Y FKI+RC + RSHDWTECP+AH GEKA+RRDPR+F+YS  ACP FR GSC +GD CEF+HGVFE WLHP+RYRT+ C  G  
Subjt:  TPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRF

Query:  CQRKVCFFAHSPEELR
        C+R++CFFAH+ E+LR
Subjt:  CQRKVCFFAHSPEELR

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein1.3e-4565.52Show/hide
Query:  TPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRF
        +P TD    F+SDEFR+Y FKI+RC + RSHDWTECP+AH GEKA+RRDPR+F+YS  ACP FR GSC +GD CEF+HGVFE WLHP+RYRT+ C  G  
Subjt:  TPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRF

Query:  CQRKVCFFAHSPEELR
        C+R++CFFAH+ E+LR
Subjt:  CQRKVCFFAHSPEELR

AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein8.5e-4568.22Show/hide
Query:  FNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFA
        ++ D FRMY FK++RC + RSHDWTECPYAH GEKA+RRDPR+++YS  ACP FR G C KGD CEFAHGVFE WLHP RYRT+ C  G  C RK+CFFA
Subjt:  FNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFA

Query:  HSPEELR
        HSP++LR
Subjt:  HSPEELR

AT5G07500.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.2e-5653.05Show/hide
Query:  AYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTR
        AY      P  DD A++ SDEFRMYA+KI+RCP++RSHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR G+C +GD CEFAHGVFE+WLHP RYRTR
Subjt:  AYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPTRYRTR

Query:  ACNAGRFCQRKVCFFAHSPEELR-PETKLKLHFDAPVARAALAALEYPVERKND----GVSEIPVKEISDGLGNERSSEL--------------EAS--E
        ACNAG  CQRKVCFFAH+PE+LR  E K +  +     RA        V  + D      S  PV+   D L +     L              E S  +
Subjt:  ACNAGRFCQRKVCFFAHSPEELR-PETKLKLHFDAPVARAALAALEYPVERKND----GVSEIPVKEISDGLGNERSSEL--------------EAS--E

Query:  FELPHIEWISELL
         +L H +WISEL+
Subjt:  FELPHIEWISELL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACAAGGGTTTGTTTTCGGCATCAATGACGTGTACGGTCATGAATTCACCGCCGTGGCGCTGCCGGAATTCGCTTACAGGAACACTCGCTTAACGCCACAAACCGA
TGACACGGCGCTGTTCAACTCCGACGAGTTTCGGATGTACGCTTTCAAGATCCAACGGTGTCCGAAATCCCGCAGCCATGATTGGACGGAATGTCCTTATGCCCACCGTG
GCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTTAACTACTCTGCTGTGGCTTGCCCTGCCTTTCGGACGGGCAGCTGCCCAAAGGGGGATTTTTGTGAATTTGCTCAT
GGGGTTTTCGAGTTCTGGCTCCACCCGACCCGGTACCGAACCCGGGCCTGTAATGCGGGCAGGTTTTGCCAACGCAAAGTTTGCTTTTTTGCTCACTCGCCGGAGGAGCT
CCGCCCTGAGACCAAACTCAAGCTTCATTTTGATGCTCCCGTGGCGCGTGCAGCGCTGGCCGCACTTGAATATCCCGTGGAGAGAAAGAACGACGGCGTTTCGGAAATTC
CGGTGAAGGAGATCAGCGACGGACTGGGAAATGAACGGAGCTCGGAGTTGGAGGCGTCAGAATTCGAGTTGCCGCACATTGAATGGATATCGGAATTGTTGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTACAAGGGTTTGTTTTCGGCATCAATGACGTGTACGGTCATGAATTCACCGCCGTGGCGCTGCCGGAATTCGCTTACAGGAACACTCGCTTAACGCCACAAACCGA
TGACACGGCGCTGTTCAACTCCGACGAGTTTCGGATGTACGCTTTCAAGATCCAACGGTGTCCGAAATCCCGCAGCCATGATTGGACGGAATGTCCTTATGCCCACCGTG
GCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTTAACTACTCTGCTGTGGCTTGCCCTGCCTTTCGGACGGGCAGCTGCCCAAAGGGGGATTTTTGTGAATTTGCTCAT
GGGGTTTTCGAGTTCTGGCTCCACCCGACCCGGTACCGAACCCGGGCCTGTAATGCGGGCAGGTTTTGCCAACGCAAAGTTTGCTTTTTTGCTCACTCGCCGGAGGAGCT
CCGCCCTGAGACCAAACTCAAGCTTCATTTTGATGCTCCCGTGGCGCGTGCAGCGCTGGCCGCACTTGAATATCCCGTGGAGAGAAAGAACGACGGCGTTTCGGAAATTC
CGGTGAAGGAGATCAGCGACGGACTGGGAAATGAACGGAGCTCGGAGTTGGAGGCGTCAGAATTCGAGTTGCCGCACATTGAATGGATATCGGAATTGTTGCAGTAA
Protein sequenceShow/hide protein sequence
MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAH
GVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGVSEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ