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CmoCh16G002400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G002400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:1053146..1053520
RNA-Seq ExpressionCmoCh16G002400
SyntenyCmoCh16G002400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACL54192.1 unknown [Zea mays]1.0e-0438.83Show/hide
Query:  ELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVHP
        +L+R V ++A+ A A  A + G G+V  RVEP LE+ + +   +   A A  + RA  +RVV P  V   RLL  V      P++AA    P DLE VH 
Subjt:  ELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVHP

Query:  KLV
        +LV
Subjt:  KLV

ACR35570.1 unknown [Zea mays]1.0e-0438.83Show/hide
Query:  ELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVHP
        +L+R V ++A+ A A  A + G G+V  RVEP LE+ + +   +   A A  + RA  +RVV P  V   RLL  V      P++AA    P DLE VH 
Subjt:  ELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVHP

Query:  KLV
        +LV
Subjt:  KLV

PUZ64349.1 hypothetical protein GQ55_3G136800 [Panicum hallii var. hallii]9.0e-0942.31Show/hide
Query:  AELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVH
        AEL+RRV ++A+ A A  A + G   V  RVEP LE+ + +  ++   A A  + RA  + VV PP V A  LL  V +R  RP++A   R P  LE VH
Subjt:  AELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVH

Query:  PKLV
        P+LV
Subjt:  PKLV

PVH61869.1 hypothetical protein PAHAL_3G145000, partial [Panicum hallii]9.0e-0942.31Show/hide
Query:  AELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVH
        AEL+RRV ++A+ A A  A + G   V  RVEP LE+ + +  ++   A A  + RA  + VV PP V A  LL  V +R  RP++A   R P  LE VH
Subjt:  AELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVH

Query:  PKLV
        P+LV
Subjt:  PKLV

TrEMBL top hitse value%identityAlignment
A0A2T7E939 Uncharacterized protein4.3e-0942.31Show/hide
Query:  AELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVH
        AEL+RRV ++A+ A A  A + G   V  RVEP LE+ + +  ++   A A  + RA  + VV PP V A  LL  V +R  RP++A   R P  LE VH
Subjt:  AELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVH

Query:  PKLV
        P+LV
Subjt:  PKLV

A0A2T8KIA4 Uncharacterized protein (Fragment)4.3e-0942.31Show/hide
Query:  AELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVH
        AEL+RRV ++A+ A A  A + G   V  RVEP LE+ + +  ++   A A  + RA  + VV PP V A  LL  V +R  RP++A   R P  LE VH
Subjt:  AELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVH

Query:  PKLV
        P+LV
Subjt:  PKLV

B8A1Z3 Uncharacterized protein5.0e-0538.83Show/hide
Query:  ELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVHP
        +L+R V ++A+ A A  A + G G+V  RVEP LE+ + +   +   A A  + RA  +RVV P  V   RLL  V      P++AA    P DLE VH 
Subjt:  ELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVHP

Query:  KLV
        +LV
Subjt:  KLV

C4J320 Uncharacterized protein5.0e-0538.83Show/hide
Query:  ELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVHP
        +L+R V ++A+ A A  A + G G+V  RVEP LE+ + +   +   A A  + RA  +RVV P  V   RLL  V      P++AA    P DLE VH 
Subjt:  ELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVHP

Query:  KLV
        +LV
Subjt:  KLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTGAGTTTGGTCTCAGGGCGGAGCTCCTCCGGCGAGTGAGCAAAAAAGCAAACTTTGCGTTGGCAAAACCTGCCCGCATTACAGGCCCGGGTTCGGTACCGGG
TCGGGTGGAGCCAGAACTCGAAAACCCCATGAGCAAATTCACAAAAATCCCCCTTTGGGCAGCTGCCCGTCCGAAAGGCAGGGCAAGCCACAGCAGAGTAGTTAAACCGC
CGTGGGTCACGGCGTTGCGCCTTCTCGCCACGGTGGGCATAAGGACATTCCGTCCAATCATGGCTGCGGGATTTCGGACACCGTTGGATCTTGAAAGCGTACATCCGAAA
CTCGTCGGAGTTGAACAGCGCCGTGTCATCGGTTTGTGGCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTGAGTTTGGTCTCAGGGCGGAGCTCCTCCGGCGAGTGAGCAAAAAAGCAAACTTTGCGTTGGCAAAACCTGCCCGCATTACAGGCCCGGGTTCGGTACCGGG
TCGGGTGGAGCCAGAACTCGAAAACCCCATGAGCAAATTCACAAAAATCCCCCTTTGGGCAGCTGCCCGTCCGAAAGGCAGGGCAAGCCACAGCAGAGTAGTTAAACCGC
CGTGGGTCACGGCGTTGCGCCTTCTCGCCACGGTGGGCATAAGGACATTCCGTCCAATCATGGCTGCGGGATTTCGGACACCGTTGGATCTTGAAAGCGTACATCCGAAA
CTCGTCGGAGTTGAACAGCGCCGTGTCATCGGTTTGTGGCGTTAA
Protein sequenceShow/hide protein sequence
MKLEFGLRAELLRRVSKKANFALAKPARITGPGSVPGRVEPELENPMSKFTKIPLWAAARPKGRASHSRVVKPPWVTALRLLATVGIRTFRPIMAAGFRTPLDLESVHPK
LVGVEQRRVIGLWR