; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G002430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G002430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmyb-like transcription factor family protein
Genome locationCmo_Chr16:1073448..1074215
RNA-Seq ExpressionCmoCh16G002430
SyntenyCmoCh16G002430
Gene Ontology termsGO:0009723 - response to ethylene (biological process)
GO:0009733 - response to auxin (biological process)
GO:0009739 - response to gibberellin (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576830.1 NADPH-dependent diflavin oxidoreductase 1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-7399.28Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
        GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNN+SENQQQVNN
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN

Query:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPY
        LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPY
Subjt:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPY

KAG7014851.1 putative transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-7298.56Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
        GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNN+SENQQQVNN
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN

Query:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPY
        LPA+LINRFPHLCLDAPQFVPPATGSAASAAANLHGIPY
Subjt:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPY

XP_022922957.1 probable transcription factor At5g61620 [Cucurbita moschata]5.7e-74100Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
        GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN

Query:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
        LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
Subjt:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV

XP_022985491.1 probable transcription factor At5g61620 [Cucurbita maxima]1.4e-7297.86Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
        GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNN+SENQ+QVNN
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN

Query:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
        LPAQLINRFPHLCLDAP FVPPATGSAASAAANLHGIPYV
Subjt:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV

XP_023553250.1 probable transcription factor At5g61620 [Cucurbita pepo subsp. pepo]2.2e-7399.29Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
        GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN

Query:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
        LPAQLINRFPHLCLDAP FVPPATGSAASAAANLHGIPYV
Subjt:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV

TrEMBL top hitse value%identityAlignment
A0A6J1CH76 probable transcription factor At5g616205.8e-5681.58Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEI-KNN--VPQDC------QASGETS---LPK
        GKPW+EEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKRRASLFDMPEI KNN  VPQDC       +SGE+S   LPK
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEI-KNN--VPQDC------QASGETS---LPK

Query:  NNSSENQQQVNNLPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
          SSENQQQVNNLP QLINRFPHLCLD+P FVPPA   AAS  ANLHGIPYV
Subjt:  NNSSENQQQVNNLPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV

A0A6J1E4T8 probable transcription factor At5g616202.8e-74100Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
        GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN

Query:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
        LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
Subjt:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV

A0A6J1FVF1 probable transcription factor At5g616201.3e-6083.33Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQAS-------GETS---LPKNN
        GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKRRASLFD+PEIKNNV Q+CQAS       GETS   LPK N
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQAS-------GETS---LPKNN

Query:  SSENQQQVNNLPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
        SSENQQQV+NLP QLINRFPHLCLD P FVP  TGS AS  ANLHGIPYV
Subjt:  SSENQQQVNNLPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV

A0A6J1J8B3 probable transcription factor At5g616206.8e-7397.86Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN
        GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNN+SENQ+QVNN
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN

Query:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
        LPAQLINRFPHLCLDAP FVPPATGSAASAAANLHGIPYV
Subjt:  LPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV

A0A6J1JM29 probable transcription factor At5g616201.3e-6083.33Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQAS-------GETS---LPKNN
        GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKRRASLFD+PEIKNNV Q+CQAS       GETS   LPK N
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQAS-------GETS---LPKNN

Query:  SSENQQQVNNLPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV
        SSENQQQV+NLP QLINRFPHLCLD P FVP  TGS AS  ANLHGIPYV
Subjt:  SSENQQQVNNLPAQLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV

SwissProt top hitse value%identityAlignment
B8BI93 Transcription factor MYBS26.2e-2377.61Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM
        G PWTEEEH+ FL GL++LGKGDWRGISKNFVT+RT TQVASHAQKYFLR+ +   KKKRRASLFD+
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM

Q7XC51 Transcription factor MYBS26.2e-2377.61Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM
        G PWTEEEH+ FL GL++LGKGDWRGISKNFVT+RT TQVASHAQKYFLR+ +   KKKRRASLFD+
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM

Q7XC57 Transcription factor MYBS31.1e-2256.73Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM-PEIKNNVPQDCQASGETSLPKNNSSENQQQVN
        G PWTEEEHR FL GL+KLGKGDWRGIS+NFV +RTPTQVASHAQKYF+R+ +   ++KRR+SLFDM P+   ++P           P     E + QV 
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM-PEIKNNVPQDCQASGETSLPKNNSSENQQQVN

Query:  NLPA
        N PA
Subjt:  NLPA

Q9FKF9 Probable transcription factor At5g616204.6e-2654.24Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMP-EIKNNVPQDCQASGETSLPKNNSSENQQQV-
        GKPWTEEEHR FL GL KLGKGDWRGI+K+FV+TRTPTQVASHAQKYF+R ++ N+K+KRRASLFD+  E +    ++ Q +   + PK   +  QQ V 
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMP-EIKNNVPQDCQASGETSLPKNNSSENQQQV-

Query:  -NNLPAQLINRFPHLCLD
          +   ++ NRF +L ++
Subjt:  -NNLPAQLINRFPHLCLD

Q9LVS0 Transcription factor KUA12.7e-2646.21Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM-PEIKNNVPQDCQASGETSLPKNNSSENQQQVN
        G PWTEEEHR FL GL+KLGKGDWRGIS+N+VTTRTPTQVASHAQKYF+R+ + + ++KRR+SLFDM P+   ++P D Q   E ++P     +    ++
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM-PEIKNNVPQDCQASGETSLPKNNSSENQQQVN

Query:  NLPAQLINRFPHL-------CLDAPQFV---PPATGSAASAAANL
           A      P +        +D+       P AT +AAS+++ L
Subjt:  NLPAQLINRFPHL-------CLDAPQFV---PPATGSAASAAANL

Arabidopsis top hitse value%identityAlignment
AT1G70000.1 myb-like transcription factor family protein3.4e-2474.63Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM
        G PWTEEEHR FL GL K+GKGDWRGIS+NFV TRTPTQVASHAQKYFLR+ + N +++RR+SLFD+
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM

AT1G70000.2 myb-like transcription factor family protein3.4e-2474.63Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM
        G PWTEEEHR FL GL K+GKGDWRGIS+NFV TRTPTQVASHAQKYFLR+ + N +++RR+SLFD+
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM

AT5G47390.1 myb-like transcription factor family protein1.9e-2746.21Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM-PEIKNNVPQDCQASGETSLPKNNSSENQQQVN
        G PWTEEEHR FL GL+KLGKGDWRGIS+N+VTTRTPTQVASHAQKYF+R+ + + ++KRR+SLFDM P+   ++P D Q   E ++P     +    ++
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDM-PEIKNNVPQDCQASGETSLPKNNSSENQQQVN

Query:  NLPAQLINRFPHL-------CLDAPQFV---PPATGSAASAAANL
           A      P +        +D+       P AT +AAS+++ L
Subjt:  NLPAQLINRFPHL-------CLDAPQFV---PPATGSAASAAANL

AT5G56840.1 myb-like transcription factor family protein4.4e-2470.83Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKN
        G PWT EEHRTFL GL+KLGKGDWRGIS+NFV T++PTQVASHAQKYFLR+      K+RR SLFDM    N
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKN

AT5G61620.1 myb-like transcription factor family protein3.3e-2754.24Show/hide
Query:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMP-EIKNNVPQDCQASGETSLPKNNSSENQQQV-
        GKPWTEEEHR FL GL KLGKGDWRGI+K+FV+TRTPTQVASHAQKYF+R ++ N+K+KRRASLFD+  E +    ++ Q +   + PK   +  QQ V 
Subjt:  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMP-EIKNNVPQDCQASGETSLPKNNSSENQQQV-

Query:  -NNLPAQLINRFPHLCLD
          +   ++ NRF +L ++
Subjt:  -NNLPAQLINRFPHLCLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTATGCAGGAAAGCCGTGGACCGAAGAGGAACATAGAACGTTTTTGGCTGGTTTGAAGAAGCTCGGGAAAGGGGATTGGAGAGGGATTTCGAAGAACTTTGTAAC
CACGAGAACACCGACCCAAGTAGCTAGTCATGCCCAAAAATACTTTTTGAGGAAGATGCATGCAAACGAAAAGAAGAAACGTAGAGCGAGTCTTTTTGACATGCCTGAAA
TCAAAAATAATGTTCCCCAAGATTGCCAAGCTTCTGGAGAAACGTCACTGCCAAAGAACAACAGTTCTGAGAATCAACAACAGGTCAATAATTTACCAGCACAACTTATC
AATCGATTCCCTCATCTTTGTTTGGATGCTCCTCAATTTGTTCCTCCGGCAACTGGATCGGCAGCCTCGGCTGCTGCAAATTTGCATGGGATTCCTTATGTGCGCCACTT
AATTCTAACTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATTATGCAGGAAAGCCGTGGACCGAAGAGGAACATAGAACGTTTTTGGCTGGTTTGAAGAAGCTCGGGAAAGGGGATTGGAGAGGGATTTCGAAGAACTTTGTAAC
CACGAGAACACCGACCCAAGTAGCTAGTCATGCCCAAAAATACTTTTTGAGGAAGATGCATGCAAACGAAAAGAAGAAACGTAGAGCGAGTCTTTTTGACATGCCTGAAA
TCAAAAATAATGTTCCCCAAGATTGCCAAGCTTCTGGAGAAACGTCACTGCCAAAGAACAACAGTTCTGAGAATCAACAACAGGTCAATAATTTACCAGCACAACTTATC
AATCGATTCCCTCATCTTTGTTTGGATGCTCCTCAATTTGTTCCTCCGGCAACTGGATCGGCAGCCTCGGCTGCTGCAAATTTGCATGGGATTCCTTATGTGCGCCACTT
AATTCTAACTAATTAA
Protein sequenceShow/hide protein sequence
MYYAGKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNNLPAQLI
NRFPHLCLDAPQFVPPATGSAASAAANLHGIPYVRHLILTN