; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G002560 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G002560
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationCmo_Chr16:1140541..1141644
RNA-Seq ExpressionCmoCh16G002560
SyntenyCmoCh16G002560
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014865.1 putative polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-8575.76Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        MAPSKDEWPSDGEDKWVQFYD+DSL                           TALFFHN NGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI
        NTDGIDISQSKNVLIQNSFI TGDDCIAINNGSSNINIV ITCGPGHGISIGSLGKDGDYNVVEN             G        GYGYARNITFEKI
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI

Query:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV
        ILENTKNPIIIDQYYSAFAYARKHM + I V
Subjt:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV

XP_022956242.1 probable polygalacturonase At3g15720 [Cucurbita moschata]2.7e-8870.56Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        MAPSKDEW SDG DKW+QFYDIDSLTV+GDG+F+GQGSSWW+KDCH HC RPTA+FFHN N L LSK KH+NSG+NH+SIN CN+V+IS+IHI+AP+ESP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI
        NTDGIDIS SKNV I +SFI TGDDCIAIN+GSSNI+I+ +TCGPGHGISIGSLGK+GDYNVVEN             G        GYGYA+NITFEKI
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI

Query:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV
         LEN KNPIIIDQ+Y+A+AY RK+  + I V
Subjt:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV

XP_022979578.1 probable polygalacturonase At3g15720 [Cucurbita maxima]4.4e-9171.86Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        MAPSKDEW +DG DKW+QFYDIDSLTV+GDGRF+GQGSSWW+KDCH HC RPTALFFHN NGL L+K KH+NSG+NH+SIN+CN+V+IS+IHI+APDESP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI
        NTDGIDIS SKNV IQ+SFI TGDDC+AIN+GSSNI+I+ +TCGPGHGISIGSLGKDGDYNVVEN             G        GYGYA+NITFEKI
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI

Query:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV
         LEN KNPIIIDQ+Y+A+AY RK+  + I V
Subjt:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV

XP_023526924.1 probable polygalacturonase At3g15720 [Cucurbita pepo subsp. pepo]5.6e-8673.15Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        MAP+KDEW  DG DKW+QFYDIDSLTV+GDGRF+GQGSSWW+KDCH HC RPTA+FFHN NGL LSK KH+NSGKNH+SIN CN+V+IS+IHI+APDESP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI
        NTDGIDIS SKNV IQ+SFI TGDDC+AIN+GSSNI+I  +TCGPGHGISIGSLGK+GDYNVVEN             G        GYGYA+NITFEKI
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI

Query:  ILENTKNPIIIDQYYS
         LEN KNPIIIDQ+Y+
Subjt:  ILENTKNPIIIDQYYS

XP_023552838.1 probable polygalacturonase At3g15720 [Cucurbita pepo subsp. pepo]1.7e-10685.71Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        MAPSKDEWPSDGEDKWVQFY+IDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHN NGLRLSKMKHINSGKNHISINDCNNVVIS+IHISAP++SP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI
        NTDGIDISQSKNVLIQNS IATGDDCIAINNGSSNINIV ITCGPGHGISIGSLGKDGDYNVVEN             G        GYGYARNITFEKI
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI

Query:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV
        ILENTKNPIIIDQYYSAFAYARK+M + I V
Subjt:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV

TrEMBL top hitse value%identityAlignment
A0A0A0KZ95 Uncharacterized protein3.4e-8167.86Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDC-HNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES
        MAP+KDEW SDG+ +W+QF+DI+ L +QG GRF+GQGS WW KDC H HC RPTALFFHN NGL++  MKHINS KNHISIN C++V+ S++HISAP++S
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDC-HNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES

Query:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEK
        PNTDGIDIS+S N+ I++SF+ATGDDCIAINNGSSNINI  ITCGPGHGISIGSLGKDG+YNVVEN             G        GYGYA+NITFEK
Subjt:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEK

Query:  IILENTKNPIIIDQYYSAFAYARK
        I ++N KNPIIIDQYYS++AY+RK
Subjt:  IILENTKNPIIIDQYYSAFAYARK

A0A5D3CYS8 Putative polygalacturonase5.3e-8267.71Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        MAP+KDEWP+DG+ KWVQF D++ L VQG GRF+GQGS WW    H  C RPTALFFHN NGL+++ MKH+NS KNHISIN CN+V+ S++HISAP++SP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI
        NTDGIDISQS N+ IQ+SFI TGDDC+AINNGSSNINI  ITCGPGHGISIGSLGKDG+YNVVEN             G        GYGYA+NITFEKI
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI

Query:  ILENTKNPIIIDQYYSAFAYARK
         L+N+KNPIIIDQYY+++AY+RK
Subjt:  ILENTKNPIIIDQYYSAFAYARK

A0A6J1CJJ6 probable polygalacturonase At3g157203.6e-7864.94Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        +AP+KD WPSD  D+W+QF DID L V G G+F+GQGSSWW KDC  HC RPTALF HN NGL+L +MKHINSG+NHISIN CN+ +IS++HI AP++SP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVE-------------NG------GYGYGYARNITFEKI
        NTDGIDIS S NVLIQNSF+ TGDDCIA+NNGS+NINIV +TCGPGHGISIGSLG++G YNVVE             NG        GYGYAR ITFE+I
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVE-------------NG------GYGYGYARNITFEKI

Query:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV
         L + KNPIIIDQYYS  A A+K+ +  I V
Subjt:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV

A0A6J1GVS6 probable polygalacturonase At3g157201.3e-8870.56Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        MAPSKDEW SDG DKW+QFYDIDSLTV+GDG+F+GQGSSWW+KDCH HC RPTA+FFHN N L LSK KH+NSG+NH+SIN CN+V+IS+IHI+AP+ESP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI
        NTDGIDIS SKNV I +SFI TGDDCIAIN+GSSNI+I+ +TCGPGHGISIGSLGK+GDYNVVEN             G        GYGYA+NITFEKI
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI

Query:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV
         LEN KNPIIIDQ+Y+A+AY RK+  + I V
Subjt:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV

A0A6J1IWN4 probable polygalacturonase At3g157202.1e-9171.86Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        MAPSKDEW +DG DKW+QFYDIDSLTV+GDGRF+GQGSSWW+KDCH HC RPTALFFHN NGL L+K KH+NSG+NH+SIN+CN+V+IS+IHI+APDESP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI
        NTDGIDIS SKNV IQ+SFI TGDDC+AIN+GSSNI+I+ +TCGPGHGISIGSLGKDGDYNVVEN             G        GYGYA+NITFEKI
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN------------GGY-------GYGYARNITFEKI

Query:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV
         LEN KNPIIIDQ+Y+A+AY RK+  + I V
Subjt:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV

SwissProt top hitse value%identityAlignment
Q02096 Polygalacturonase1.4e-3940.74Show/hide
Query:  KDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNH----C-NRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES
        + +W      +W++F DI +LT++G G  NG G +WW+  C       C + PTAL F +   L +S +   +S K H+S + C +V+ SN+ ++AP+ S
Subjt:  KDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNH----C-NRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES

Query:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGD----YNVVENGGY---------------GYGYARNITFEK
        PNTDGI I+ ++ + + NS I TGDDCI+I +GS  +   +ITCGPGHGISIGSLG          V+ +GG                G G A+NI F+ 
Subjt:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGD----YNVVENGGY---------------GYGYARNITFEK

Query:  IILENTKNPIIIDQYY
        I++ N  NPIIIDQYY
Subjt:  IILENTKNPIIIDQYY

Q8RY29 Polygalacturonase ADPG21.6e-3844.19Show/hide
Query:  SDGED--KWVQFYDIDSLTVQG--DGRFNGQGSSWWNKDCHNH----CNR-PTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        SD +D  KW+ F  +++L+V G   G  +G G +WW   C  +    C + PTAL F+N   L +  +K  N+ +  ISI  C+NV +SN+ ++AP +SP
Subjt:  SDGED--KWVQFYDIDSLTVQG--DGRFNGQGSSWWNKDCHNH----CNR-PTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKD-----------------GDYNVVENGGY--GYGYARNITFEKI
        NTDGI I+ ++N+ +  S I TGDDCI+I +GS N+ I DITCGPGHGISIGSLG D                 G  N V    Y  G G A NI F+ I
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKD-----------------GDYNVVENGGY--GYGYARNITFEKI

Query:  ILENTKNPIIIDQYY
         ++N KNPIIIDQ Y
Subjt:  ILENTKNPIIIDQYY

Q94AJ5 Probable polygalacturonase At1g801702.8e-4041.13Show/hide
Query:  DEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDC-HNHCN----RPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        D W      KW+ F+ +  LTV+G G  NG G  WW + C HNH N     PTAL FH    +R+  +  I+S + HI++  C  V IS + + AP  SP
Subjt:  DEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDC-HNHCN----RPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVE-------------NG------GYGYGYARNITFEKI
        NTDGI IS S+ ++I N+ ++TGDDCI+I   S+ I+I +I CGPGHGISIGSLGK   +  V              NG        G G    I F  I
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVE-------------NG------GYGYGYARNITFEKI

Query:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV
         + N  NPIIIDQYY        +   AIS+
Subjt:  ILENTKNPIIIDQYYSAFAYARKHMVQAISV

Q9LW07 Probable polygalacturonase At3g157203.1e-5553.24Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        +APSK  W  D +D+W+ F DI+ L ++GDG  NGQGSSWW     +  +RPTAL F + N LRLS + H++S   HI I++CN V IS++ I+AP+ SP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN-------------------GGYGYGYARNITFEKI
        NTDGID+  S NV+IQ+  IATGDDCIAIN+G+SNI+I  I CGPGHGISIGSLGKDG+   VEN                      G GYAR ITF  I
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN-------------------GGYGYGYARNITFEKI

Query:  ILENTKNPIIIDQYYS
         L+N +NPIIIDQ+Y+
Subjt:  ILENTKNPIIIDQYYS

Q9SFB7 Polygalacturonase QRT22.8e-4040.95Show/hide
Query:  EWPSDGEDK--WVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNH-----CNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES
        E PSD +++  W+ F ++++L V+G GR +G G  WW K C  +        PTA+ F   N LR+S ++  N+ + H++  DC NV   N+ +++P +S
Subjt:  EWPSDGEDK--WVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNH-----CNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES

Query:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGD----YNVVENGGY---------------GYGYARNITFEK
        PNTDGI +S ++N+LIQ+S + TGDDCI+I +GS N+    ITCGPGHGISIGSLG+D       NVV N                  G+G A+NI F+ 
Subjt:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGD----YNVVENGGY---------------GYGYARNITFEK

Query:  IILENTKNPIIIDQYYSAFAYARKHMVQAISV
        II++N  NPIII+Q Y     A      A+ V
Subjt:  IILENTKNPIIIDQYYSAFAYARKHMVQAISV

Arabidopsis top hitse value%identityAlignment
AT3G15720.1 Pectin lyase-like superfamily protein2.2e-5653.24Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        +APSK  W  D +D+W+ F DI+ L ++GDG  NGQGSSWW     +  +RPTAL F + N LRLS + H++S   HI I++CN V IS++ I+AP+ SP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN-------------------GGYGYGYARNITFEKI
        NTDGID+  S NV+IQ+  IATGDDCIAIN+G+SNI+I  I CGPGHGISIGSLGKDG+   VEN                      G GYAR ITF  I
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN-------------------GGYGYGYARNITFEKI

Query:  ILENTKNPIIIDQYYS
         L+N +NPIIIDQ+Y+
Subjt:  ILENTKNPIIIDQYYS

AT3G15720.2 Pectin lyase-like superfamily protein6.0e-5452.31Show/hide
Query:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP
        +APSK  W  D +D+W+ F DI+ L ++GDG  NGQGSSWW     +  +RPT   F + N LRLS + H++S   HI I++CN V IS++ I+AP+ SP
Subjt:  MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESP

Query:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN-------------------GGYGYGYARNITFEKI
        NTDGID+  S NV+IQ+  IATGDDCIAIN+G+SNI+I  I CGPGHGISIGSLGKDG+   VEN                      G GYAR ITF  I
Subjt:  NTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVEN-------------------GGYGYGYARNITFEKI

Query:  ILENTKNPIIIDQYYS
         L+N +NPIIIDQ+Y+
Subjt:  ILENTKNPIIIDQYYS

AT4G35670.1 Pectin lyase-like superfamily protein5.5e-4749.54Show/hide
Query:  MAPS-KDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES
        +APS K  W       W++F  +  L + G G  + +GSS+W  +      RPTAL     + LR++ +  I+S KNHISI  CN V ISNI++ AP+ S
Subjt:  MAPS-KDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES

Query:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDG-------------DYNVVENGGY------GYGYARNITFEK
        PNTDGIDIS S N+ I +S I TGDDCIAIN+GSSNINI  I CGPGHGIS+GSLG  G              +N   NG        G GYARNI+F  
Subjt:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDG-------------DYNVVENGGY------GYGYARNITFEK

Query:  IILENTKNPIIIDQYY
        I L NTKNPIIIDQ+Y
Subjt:  IILENTKNPIIIDQYY

AT5G17200.1 Pectin lyase-like superfamily protein6.1e-4647.6Show/hide
Query:  WPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESPNTDGIDI
        W +     W+ F  I+ L V G G  +G+GS WW     N  NRP A+ F+N NGLR+S ++H+NS +NH+ ++   N+ +  + ++AP +SPNTDGIDI
Subjt:  WPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESPNTDGIDI

Query:  SQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVE-------------NG------GYGYGYARNITFEKIILENTKN
        S    V I +S IATGDDCIAIN+GSS+INI  I CGPGHGIS+GSLG  GD+  VE             NG        G GYAR I+FE I +  ++N
Subjt:  SQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVE-------------NG------GYGYGYARNITFEKIILENTKN

Query:  PIIIDQYY
        PIIIDQ Y
Subjt:  PIIIDQYY

AT5G27530.1 Pectin lyase-like superfamily protein8.7e-4547.47Show/hide
Query:  MAPSK-DEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES
        +APS    W +     W+ F  +  L + G G  NG+GSS+W            AL   N N L ++ +  I+S K+HISI +C+ V IS I+I AP+ S
Subjt:  MAPSK-DEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDES

Query:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGD-------------YNVVENGGY------GYGYARNITFEK
        PNTDGIDIS S NV I +S I TGDDCIAIN GSS+INI  + CGPGHGIS+GSLG DG+             +N   NG        G GYARNI+FE 
Subjt:  PNTDGIDISQSKNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGD-------------YNVVENGGY------GYGYARNITFEK

Query:  IILENTKNPIIIDQYYS
        I L N +NPIIIDQ Y+
Subjt:  IILENTKNPIIIDQYYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAAGCAAGGATGAATGGCCCAGTGATGGTGAAGATAAATGGGTCCAATTTTACGACATAGATTCTCTCACTGTCCAAGGAGATGGTCGATTTAATGGCCAAGG
TTCTTCATGGTGGAACAAAGATTGTCATAATCACTGCAACCGACCAACGGCATTATTTTTCCACAACGGTAACGGGCTTCGTCTTAGTAAAATGAAGCACATTAATAGTG
GCAAGAACCATATTTCCATAAATGATTGCAATAATGTCGTTATCTCAAATATTCACATTAGTGCTCCAGATGAGAGTCCAAATACAGATGGAATTGATATTTCCCAATCA
AAGAACGTTCTTATTCAAAATTCTTTTATAGCTACAGGTGATGATTGTATTGCCATTAATAACGGCTCTTCAAATATCAATATAGTGGACATCACTTGTGGCCCCGGTCA
TGGCATAAGCATTGGGAGCTTAGGAAAGGACGGTGATTATAATGTTGTTGAAAATGGTGGATATGGATATGGATATGCAAGAAACATCACGTTCGAGAAAATAATACTCG
AAAATACAAAAAACCCAATCATTATCGATCAATATTACTCAGCTTTTGCATACGCAAGGAAACATATGGTACAAGCTATATCTGTCATTCCACCCCTTCCTTGTTTATCA
AAATCTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCAAGCAAGGATGAATGGCCCAGTGATGGTGAAGATAAATGGGTCCAATTTTACGACATAGATTCTCTCACTGTCCAAGGAGATGGTCGATTTAATGGCCAAGG
TTCTTCATGGTGGAACAAAGATTGTCATAATCACTGCAACCGACCAACGGCATTATTTTTCCACAACGGTAACGGGCTTCGTCTTAGTAAAATGAAGCACATTAATAGTG
GCAAGAACCATATTTCCATAAATGATTGCAATAATGTCGTTATCTCAAATATTCACATTAGTGCTCCAGATGAGAGTCCAAATACAGATGGAATTGATATTTCCCAATCA
AAGAACGTTCTTATTCAAAATTCTTTTATAGCTACAGGTGATGATTGTATTGCCATTAATAACGGCTCTTCAAATATCAATATAGTGGACATCACTTGTGGCCCCGGTCA
TGGCATAAGCATTGGGAGCTTAGGAAAGGACGGTGATTATAATGTTGTTGAAAATGGTGGATATGGATATGGATATGCAAGAAACATCACGTTCGAGAAAATAATACTCG
AAAATACAAAAAACCCAATCATTATCGATCAATATTACTCAGCTTTTGCATACGCAAGGAAACATATGGTACAAGCTATATCTGTCATTCCACCCCTTCCTTGTTTATCA
AAATCTCATTAA
Protein sequenceShow/hide protein sequence
MAPSKDEWPSDGEDKWVQFYDIDSLTVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNGNGLRLSKMKHINSGKNHISINDCNNVVISNIHISAPDESPNTDGIDISQS
KNVLIQNSFIATGDDCIAINNGSSNINIVDITCGPGHGISIGSLGKDGDYNVVENGGYGYGYARNITFEKIILENTKNPIIIDQYYSAFAYARKHMVQAISVIPPLPCLS
KSH