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CmoCh16G002580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G002580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAspartyl/glutamyl-tRNA(Asn/Gln) amidotransferasesubunit B
Genome locationCmo_Chr16:1144474..1147607
RNA-Seq ExpressionCmoCh16G002580
SyntenyCmoCh16G002580
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI22620.3 unnamed protein product, partial [Vitis vinifera]4.6e-0756.6Show/hide
Query:  LERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSM
        +ERSRDS   M PI +G+ P RW ++R +++   R V SSGISPD LLLERSM
Subjt:  LERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSM

GER46344.1 leucine--tRNA ligase, partial [Striga asiatica]3.5e-0751.61Show/hide
Query:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSML
        GI P +  +E+SRDS  FM P+LSGM P++ F +R R LS+ RLV S G+SPDK+L E  ++
Subjt:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSML

GER46518.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferasesubunit B [Striga asiatica]2.2e-0952.94Show/hide
Query:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMSAKM
        GI P + FLE+SRD++ FM P+L GM P+R F +R  D S+ RLVIS GISPD++L ERS+L+   ++
Subjt:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMSAKM

KAG2708738.1 hypothetical protein I3760_05G207200 [Carya illinoinensis]1.2e-0746.27Show/hide
Query:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMSAK
        GI PQ WF+++SRDS+ F  PI  G+ P++ F+++ +  ++  LVI SG SP  LLLERS++  S K
Subjt:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMSAK

PRQ57106.1 hypothetical protein RchiOBHm_Chr1g0344651 [Rosa chinensis]4.6e-0750.77Show/hide
Query:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMS
        GI P  W LERSR S     PI SG+ P++W  ++ +   A R VIS GISP +LLL+RS+LV S
Subjt:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMS

TrEMBL top hitse value%identityAlignment
A0A2P5C326 Uncharacterized protein5.1e-0445.71Show/hide
Query:  GGIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMSAKMG
        GGI P+      S+DS   M P   G+ P+R   ERLR+   +R  I SGI P KLLLERSM V   + G
Subjt:  GGIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMSAKMG

A0A2P6SEJ6 Uncharacterized protein2.2e-0750.77Show/hide
Query:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMS
        GI P  W LERSR S     PI SG+ P++W  ++ +   A R VIS GISP +LLL+RS+LV S
Subjt:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMS

A0A5A7QM95 Leucine--tRNA ligase (Fragment)1.7e-0751.61Show/hide
Query:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSML
        GI P +  +E+SRDS  FM P+LSGM P++ F +R R LS+ RLV S G+SPDK+L E  ++
Subjt:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSML

A0A5A7QNK9 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferasesubunit B1.1e-0952.94Show/hide
Query:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMSAKM
        GI P + FLE+SRD++ FM P+L GM P+R F +R  D S+ RLVIS GISPD++L ERS+L+   ++
Subjt:  GIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMSAKM

V4U753 Uncharacterized protein6.7e-0445Show/hide
Query:  SWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMS
        S F ++S +     PPI  G+ P++ F++R ++++  RLV +SGISP  LLLERSML  S
Subjt:  SWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGTGGTATTCGTCCCCAGAGTTGGTTCCTTGAGAGATCAAGAGACTCCAAATCCTTCATGCCTCCGATTCTGTCTGGGATGGTTCCTCTTAGATGGTTTATTGA
GAGATTGAGAGACCTCAGTGCAAAGAGGTTGGTGATTTCTTCAGGGATTTCTCCGGATAAGTTGTTGTTAGAGAGGTCGATGCTAGTCATGAGTGCCAAGATGGGCATTT
GGAAGCTTGATGACATGTGTTGTAAAGAACAAAACAGAACAAGAGAGAACAAGAAGCACATCGCTGAGCTATGCGAGTTTGTGGCATACAGACAAGAAGTACTTTACTCT
CCAAGCCTTACTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGTGGTATTCGTCCCCAGAGTTGGTTCCTTGAGAGATCAAGAGACTCCAAATCCTTCATGCCTCCGATTCTGTCTGGGATGGTTCCTCTTAGATGGTTTATTGA
GAGATTGAGAGACCTCAGTGCAAAGAGGTTGGTGATTTCTTCAGGGATTTCTCCGGATAAGTTGTTGTTAGAGAGGTCGATGCTAGTCATGAGTGCCAAGATGGGCATTT
GGAAGCTTGATGACATGTGTTGTAAAGAACAAAACAGAACAAGAGAGAACAAGAAGCACATCGCTGAGCTATGCGAGTTTGTGGCATACAGACAAGAAGTACTTTACTCT
CCAAGCCTTACTGAGTAACAATGGACCCCAAATCCCCCAAAACCCAAACACAAACCCAATTCCCATGCTCAGATAAAACCACCCATCAATAATACTTCCTCCCTCACTTT
CTTTTCCATTTTCATTCCCAAATTTTGGGGTGACACCCTCCATTCCGCAGCTCTTGTTTAATGGATCTCCACACAGCTCATTGCCAATAAAGCTAAACGGAGTAAACCTT
TGGAGCTGAGTACCTGTCGGAATTGGACCCGACAAGTTATTGTAAGACAAATTCAAGTAACTTAGGAACGATAACTCCGACATGGACGGTGGTATTCGTCCCCAGAGTTG
GTTCCTTGAGAGATCAAGAGACTCCAAATCCTTCATGCCTCCGATTCTGTCTGGGATGGTTCCTCTTAGATGGTTTATTGAGAGATTGAGAGACCTCAGTGCAAAGAGGT
TGGTGATTTCTTCAGGGATTTCTCCGGATAAGTTGTTGTTAGAGAGGTCGATGCTAGTCATGAGTGCCAAGATGGTATCATAATAGAGCTCGCTTCCTTTAGTTCTCACA
TATGCATTCTCGAGAATCGCGATAGCGTAGCCTTTGTTAAAGATAAAATGAAAACGTTGTGATAGGTCCCTCTTGGTAGCCATGGACGTAAAATTGCCAAAACAATGAGG
TATAGACCCACTTAAGTTGTTATTGCTGATGTCCATGATTTGAAGATATGAAAGATGACAAAGTTCCTTCGGGATTAGGCCACTTATCTCATTGTTCCCAAGGTTGAGAG
TCATTAGTTTCAATAGGCTCATCCCAATCCATGCTGGTATTTTTCCATGGAAGGCATTTAGACTGAGATCTAAAGCTCTCAACTCCAAGCAACTCTGAAGAGCCCGAGGA
ATCACTCCGGAAAGGCTGTTGTTTCGTAAATGCAACGATACTAATATGGTTAGAGACCCCATGGAGGTTGGTATCATGCCAGACAAATTATTGTTGTCCAAGCTTAGAAC
TTGTAGTGATTCCCAATTCTCCCAGCAGTTTGGAATGTTTCCTGATAAAAAATTGTTACCAAGATGAAGAACAGAGATCCCTAAGAACTGAGAACGACATAGGAAATGGG
TAATGTTTCCAGAGAAGAAATTGTTTGAAAGATCAAGCTGAGCAGGGGAGGATACTAAACGAGGCAATGAACCATGGAAAAGATTGGAGCGAAGGTCCATGATTGAGATA
TTACCCGTGAAAAGAATATGAGGAAGTGTTCCATAGAGTTGGTTGTGAGAGAGATTCAGGTAAATACACTGTGAAGACCAACTCCAAAACCAATCTGGAACGGTGTCTGA
AAGTTTAGCATTAGAGAGATCAACCCAACTTAACTTTTTTTGGGATTTGAGCCATTTGGGGAATTGGGGTCCTACGATGCAAGATCTCAGCCTTATTTCGTAAAGATTAA
AAGGGGGAATCCATTCTGTTGCAAAATTCAATGTGAAATTATTATCATCCATTTCCAAAATCTTTAGATTTGCTAGATTTGCAAAGTGATCCTCCAATACATTGCCTTCC
AAGTGATTATCAGATATTCTAAGTACTTGCAAACTTGATAGCAATCCCATACTCTTTGGAAGAGTTCCGCTTATTTTATTGTATTGAATGTATAGCATTGTTAATGAAGA
TAAATTTCCTATGGACTCTGGAATAGGACCAGTGATCG
Protein sequenceShow/hide protein sequence
MDGGIRPQSWFLERSRDSKSFMPPILSGMVPLRWFIERLRDLSAKRLVISSGISPDKLLLERSMLVMSAKMGIWKLDDMCCKEQNRTRENKKHIAELCEFVAYRQEVLYS
PSLTE