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CmoCh16G003090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G003090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC103494847
Genome locationCmo_Chr16:1415758..1416246
RNA-Seq ExpressionCmoCh16G003090
SyntenyCmoCh16G003090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576890.1 hypothetical protein SDJN03_24464, partial [Cucurbita argyrosperma subsp. sororia]6.5e-8499.38Show/hide
Query:  MFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKM
        MFAINLRFP VHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKM
Subjt:  MFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKM

Query:  DEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        DEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Subjt:  DEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

KAG7014917.1 hypothetical protein SDJN02_22548, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-8499.38Show/hide
Query:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
        MMFAINLRFP VHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
Subjt:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK

Query:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Subjt:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

XP_022922671.1 uncharacterized protein LOC111430603 [Cucurbita moschata]5.9e-85100Show/hide
Query:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
        MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
Subjt:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK

Query:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Subjt:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

XP_022984827.1 uncharacterized protein LOC111482994 [Cucurbita maxima]3.9e-8195.68Show/hide
Query:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
        M+FAINLRFP VHGQIHNFQFQSWPS ALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFT+LCGFL LKSEETKRCWKK
Subjt:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK

Query:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        MDEEAKLTL+KEFVSEWGFNFQPLSPRS KEMVEEYVINGENSPAISSASSLISSLKKSIGL
Subjt:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

XP_023551996.1 uncharacterized protein LOC111809798 [Cucurbita pepo subsp. pepo]1.5e-8397.53Show/hide
Query:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
        MMFAINLRFP VHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
Subjt:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK

Query:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        MDEEAKLTL+KEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKK++GL
Subjt:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

TrEMBL top hitse value%identityAlignment
A0A0A0KYF6 Uncharacterized protein3.3e-5777.16Show/hide
Query:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
        M+ AINLR P     IH+F+FQ  PSP LSR+R+P QITYCRKK SDADLASDLA EVAKINTNLIQ EEAM KSRE LFTELC FLGLKSEETKR W K
Subjt:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK

Query:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        M+EEAKL L+KEFVSEWGFNFQPLS R  KEMVEEYV NGEN   ISSASS ISSLKK++GL
Subjt:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

A0A1S3BZE3 LOW QUALITY PROTEIN: uncharacterized protein LOC1034948478.4e-5374.07Show/hide
Query:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
        M+ AINLR P   G+IHNF+FQ  PSP L R+R+P QITYCRKK SDADLA DLA EVAKINTNLIQ EEAM KSR  ++  +  FLGLKSEETKR WKK
Subjt:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK

Query:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        M+EEAKL L+KEFVSEWGFNFQPLS R  KEMVEEYV NGEN   ISSASSLISSLKK++GL
Subjt:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

A0A6J1D577 uncharacterized protein LOC1110177123.2e-6076.69Show/hide
Query:  MMFAINL-RFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWK
        M+FAINL R P    +IH+F+FQS PSPALSR+RLPCQI+YC KK SDA+LASDLA EVAK++TNLIQ EEAM KS+E LFTELCGFLGLKSEETK+ WK
Subjt:  MMFAINL-RFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWK

Query:  KMDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        KMDEEAKL L+KEFV+EWGFNFQPLSPRS KE+VEEYV NGEN  AISSA SLI SLK+ +GL
Subjt:  KMDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

A0A6J1E4R4 uncharacterized protein LOC1114306032.9e-85100Show/hide
Query:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
        MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
Subjt:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK

Query:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Subjt:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

A0A6J1J388 uncharacterized protein LOC1114829941.9e-8195.68Show/hide
Query:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK
        M+FAINLRFP VHGQIHNFQFQSWPS ALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFT+LCGFL LKSEETKRCWKK
Subjt:  MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKK

Query:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
        MDEEAKLTL+KEFVSEWGFNFQPLSPRS KEMVEEYVINGENSPAISSASSLISSLKKSIGL
Subjt:  MDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G64480.1 unknown protein2.6e-2246.03Show/hide
Query:  RKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVE------E
        +K  +D++LA+DLA E+ K NT   Q  EAM KS EIL+ E C  + LK +E K  W K+ EE KL L++EFV EW  +FQPLS  S KEMV+      +
Subjt:  RKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVE------E

Query:  YVINGENSPAISSASSLISSLKKSIG
          I   +S ++SS S L   LK+ IG
Subjt:  YVINGENSPAISSASSLISSLKKSIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTCGCAATCAATCTTCGTTTTCCTAGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCA
GATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGA
AGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATT
AAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTC
TTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTTCGCAATCAATCTTCGTTTTCCTAGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCA
GATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGA
AGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATT
AAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTC
TTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA
Protein sequenceShow/hide protein sequence
MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLI
KEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL