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CmoCh16G003310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G003310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationCmo_Chr16:1514522..1516345
RNA-Seq ExpressionCmoCh16G003310
SyntenyCmoCh16G003310
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576909.1 Cysteine-rich and transmembrane domain-containing protein WIH2, partial [Cucurbita argyrosperma subsp. sororia]7.2e-49100Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

KAG7014935.1 Cysteine-rich and transmembrane domain-containing protein WIH2 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-39100Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

XP_022922446.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]7.2e-49100Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

XP_022985146.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]6.1e-4899.01Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MSYYNQGQAPVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

XP_023551906.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]8.0e-4898.02Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MSYYNQGQAP+GVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0KWC5 Uncharacterized protein7.6e-3681.19Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MSYYNQGQ P+GVPPP GYPPEGYPKDA          YPPPGYPPQGYPPPGAYPPQGYPPPYAPQY QPPP QQ SS  GCL+GCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

A0A2C9V6I2 Rhodopsin1.2e-3888.46Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY---PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLL
        MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPP G YPPQGY   PP YAPQYGQPPPP QQ+SSSGCL+GCLAALCCCCLL
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY---PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLL

Query:  DACF
        DACF
Subjt:  DACF

A0A6J1D5E9 cysteine-rich and transmembrane domain-containing protein WIH2-like8.1e-3886.14Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MSYYNQGQ P+GVPPP GYPPEGYPKDA     YPPQGYPP GYPPQGYPPPGAYP QGYPPPYAPQYGQ PPPQQQSS  GCL+GCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

A0A6J1E456 cysteine-rich and transmembrane domain-containing protein WIH2-like3.5e-49100Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

A0A6J1J7A9 cysteine-rich and transmembrane domain-containing protein WIH2-like3.0e-4899.01Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MSYYNQGQAPVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
A5PLE2 Cysteine-rich and transmembrane domain-containing protein 13.1e-1049.12Show/hide
Query:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYP--PQGYPPPYAPQ-----YGQPPPP------------QQQSSSSGCL
        Y Q  A  G  P  GYP +GYP   YP  GYP QGYPP GYP QGYP  G YP  P G P PY  Q     Y QP PP              QS    CL
Subjt:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYP--PQGYPPPYAPQ-----YGQPPPP------------QQQSSSSGCL

Query:  QGCLAALCCCCLLD
          C AALCCCCL D
Subjt:  QGCLAALCCCCLLD

P09241 Rhodopsin5.8e-0974.55Show/hide
Query:  PPPHGYPPEGY-PKDAYPPP-GYPPQGYPPPGYPPQGYPPPGAYP----PQGYPP
        PPP GYPP+GY P+ AYPPP GYPPQGYPP GYPPQGYPP GA P    PQG PP
Subjt:  PPPHGYPPEGY-PKDAYPPP-GYPPQGYPPPGYPPQGYPPPGAYP----PQGYPP

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B1.5e-2067.33Show/hide
Query:  NQGQAPVGVPPPHGYPPEGYPKDAYPPPG--YPPQGYPPP-GYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSS-SSGCLQGCLAALCCCCLLDAC
        +Q    VGVPP H YP EG PKDAYPPPG  YP QGYPPP GYP QGYPP G YPPQGYP    PQ G PP  QQQ   S G L+GC+AALCC C+LDAC
Subjt:  NQGQAPVGVPPPHGYPPEGYPKDAYPPPG--YPPQGYPPP-GYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSS-SSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH27.5e-3380.2Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MS YN  Q PVGVPPP GYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGYPPPYAPQY  PP  QQQ SS G L+GCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH12.1e-1964.29Show/hide
Query:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF
        Y+Q Q PVG PPP GYP    PKD YPP GYPP GYPPPGY  QG      YP QGYPP   PQY Q P   QQ  ++G L+GCLAALCCCCLLDACF
Subjt:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF

Arabidopsis top hitse value%identityAlignment
AT1G31750.1 proline-rich family protein6.0e-0968.33Show/hide
Query:  HGYPPEGY---PKDAYPPP-GYPPQGYPPP--GYPPQGY-PPPGAYPPQGYPPPYAPQYG
        HGYPP  Y   P+ AYPPP GYPPQGYPPP  GYPP  Y PPPGAYPP GYP P  P+ G
Subjt:  HGYPPEGY---PKDAYPPP-GYPPQGYPPP--GYPPQGY-PPPGAYPPQGYPPPYAPQYG

AT2G41420.1 proline-rich family protein5.4e-3480.2Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC
        MS YN  Q PVGVPPP GYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGYPPPYAPQY  PP  QQQ SS G L+GCLAALCCCCLLDAC
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

AT3G49845.1 unknown protein7.0e-1852.46Show/hide
Query:  YNQGQAPVGVPPPHGYPP-EGYPKDAYPPP-GYPPQGYPPPGYPPQGYPPP-----GAYPPQGYPPPYAPQ-------YGQPPPP----------QQQSS
        Y   Q PV  PPP GYPP EGYP   YPPP GYPP  YP  GYPP GYPPP       YP QGYPPP  PQ       Y  PPPP          + +  
Subjt:  YNQGQAPVGVPPPHGYPP-EGYPKDAYPPP-GYPPQGYPPPGYPPQGYPPP-----GAYPPQGYPPPYAPQ-------YGQPPPP----------QQQSS

Query:  SSGCLQGCLAALCCCCLLDACF
        S G ++GCLA LCCC LL+ACF
Subjt:  SSGCLQGCLAALCCCCLLDACF

AT5G45350.1 proline-rich family protein6.6e-0847.96Show/hide
Query:  GQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPP-PGAYPPQ----GYPP-------PYAPQYGQPPP---PQQQSSSSGCLQGCLA
        G  P G PPP  YPP GYP+  YPP   PP  YPP GYPP  YPP PG YPP     GYPP       P AP +G  PP   P   S  +G + G +A
Subjt:  GQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPP-PGAYPPQ----GYPP-------PYAPQYGQPPP---PQQQSSSSGCLQGCLA

AT5G67600.1 unknown protein1.5e-2064.29Show/hide
Query:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF
        Y+Q Q PVG PPP GYP    PKD YPP GYPP GYPPPGY  QG      YP QGYPP   PQY Q P   QQ  ++G L+GCLAALCCCCLLDACF
Subjt:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCA
GGGATATCCGCCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTC
CTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
GTTAGTGGCAAACAAACATAGCCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCCTTCAGATCCCAATCTTCTTCTCTGTACTTCGCA
GACCTTCGCTGTCGTCTCCATTAACTCCTCCATCTATCTTCAGTTTTTCCTTCATTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGG
TCGGGATTGATTGTGTTGAGAGGGAGATATCTTGTGATTTGAAGAGGAATTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATG
GTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCGCCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCT
TATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGTTTGGCTGCGCT
GTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCTGGCTTCAAATTCAAGGACTATCTCTCTCTCTCTCTCAGTAAAGCTT
TTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCAATTTGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCA
TTTTTCTTATATAAATAACACCCCCTTATCTCTCTCTAGTGCTT
Protein sequenceShow/hide protein sequence
MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF