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CmoCh16G003410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G003410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:1576182..1577692
RNA-Seq ExpressionCmoCh16G003410
SyntenyCmoCh16G003410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044341.1 hypothetical protein E6C27_scaffold46G00670 [Cucumis melo var. makuwa]3.6e-1265.79Show/hide
Query:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV
        MEMKNK  LVAMVV MVVMA S TTI A DE I++  +GG    +T RVCPAT+LPCKTDSECSPC C   +GSC+
Subjt:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV

KAG6576915.1 hypothetical protein SDJN03_24489, partial [Cucurbita argyrosperma subsp. sororia]3.2e-0534.94Show/hide
Query:  VALLVMVVLAAVMAQSAAVDEAIQLPSEGGAGCYDTPPP----PRVCPVMILPCKTDSECSP-CYC----------VNGSCRDHMEMKNKVGLVAMVVVM
        V  L++   A   A  AAVDE IQL S+GG    D P       + CP +++PCK DS+C P C C          + G+ R+ ME K +  L+AMV ++
Subjt:  VALLVMVVLAAVMAQSAAVDEAIQLPSEGGAGCYDTPPP----PRVCPVMILPCKTDSECSP-CYC----------VNGSCRDHMEMKNKVGLVAMVVVM

Query:  VVMAHSATTIAAVDEPIQVPTNGGGSESDTPRV-------CPATLLPCKTDSECSP-CNC-VNGSC
        ++ A + +      E IQ+ ++G    +D PR        CP  L+ C+ DS+C P C C  NG C
Subjt:  VVMAHSATTIAAVDEPIQVPTNGGGSESDTPRV-------CPATLLPCKTDSECSP-CNC-VNGSC

KGN52766.1 hypothetical protein Csa_015422 [Cucumis sativus]2.3e-1969.74Show/hide
Query:  MEMNKKVALLVMVVLAAVMAQS----AAVDEAIQLPSEGGAGCYDTPPPPRVCPVMILPCKTDSECSPCYCVNGSC
        MEM  KVAL+ MVV+  VM +S    AA+DE I+LP+ G A  YDTPPPPRVCP+MILPCKTDSECSPCYC NGSC
Subjt:  MEMNKKVALLVMVVLAAVMAQS----AAVDEAIQLPSEGGAGCYDTPPPPRVCPVMILPCKTDSECSPCYCVNGSC

KGN52767.1 hypothetical protein Csa_015168 [Cucumis sativus]1.0e-1165.79Show/hide
Query:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV
        MEMKNK  LVAMVV MVVMA S TTI A DE I++  +GG    +T RVCPATLLPC+TDSECSPC C   +G+CV
Subjt:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV

TYK29470.1 hypothetical protein E5676_scaffold655G00670 [Cucumis melo var. makuwa]1.6e-1267.11Show/hide
Query:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV
        MEMKNK  LVAMVV MVVMA S TTI A DE I+V  +GG    +T RVCPAT+LPCKTDSECSPC C   +GSC+
Subjt:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV

TrEMBL top hitse value%identityAlignment
A0A0A0KWE9 Uncharacterized protein5.0e-1265.79Show/hide
Query:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV
        MEMKNK  LVAMVV MVVMA S TTI A DE I++  +GG    +T RVCPATLLPC+TDSECSPC C   +G+CV
Subjt:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV

A0A0A0KY39 Uncharacterized protein1.1e-1969.74Show/hide
Query:  MEMNKKVALLVMVVLAAVMAQS----AAVDEAIQLPSEGGAGCYDTPPPPRVCPVMILPCKTDSECSPCYCVNGSC
        MEM  KVAL+ MVV+  VM +S    AA+DE I+LP+ G A  YDTPPPPRVCP+MILPCKTDSECSPCYC NGSC
Subjt:  MEMNKKVALLVMVVLAAVMAQS----AAVDEAIQLPSEGGAGCYDTPPPPRVCPVMILPCKTDSECSPCYCVNGSC

A0A5A7TRY5 Uncharacterized protein1.7e-1265.79Show/hide
Query:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV
        MEMKNK  LVAMVV MVVMA S TTI A DE I++  +GG    +T RVCPAT+LPCKTDSECSPC C   +GSC+
Subjt:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV

A0A5D3E1Q5 Uncharacterized protein7.8e-1367.11Show/hide
Query:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV
        MEMKNK  LVAMVV MVVMA S TTI A DE I+V  +GG    +T RVCPAT+LPCKTDSECSPC C   +GSC+
Subjt:  MEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNC--VNGSCV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAACAAGAAGGTTGCTTTGCTGGTTATGGTGGTTCTGGCGGCGGTTATGGCTCAATCCGCGGCCGTGGATGAGGCGATTCAGCTGCCGTCGGAGGGCGGAGC
AGGTTGTTACGACACACCGCCCCCTCCAAGAGTATGTCCGGTTATGATATTGCCGTGTAAAACTGACTCTGAGTGCTCTCCATGTTACTGTGTTAATGGCTCCTGCAGAG
ATCATATGGAGATGAAAAACAAGGTTGGTTTGGTGGCTATGGTGGTTGTGATGGTGGTTATGGCTCACTCCGCCACCACCATCGCCGCCGTGGATGAGCCCATTCAGGTC
CCAACCAACGGCGGAGGAAGTGAATCCGATACACCCAGGGTGTGCCCGGCTACACTTTTGCCATGCAAAACTGACTCTGAGTGCTCTCCATGCAACTGTGTCAATGGCTC
CTGCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGAACAAGAAGGTTGCTTTGCTGGTTATGGTGGTTCTGGCGGCGGTTATGGCTCAATCCGCGGCCGTGGATGAGGCGATTCAGCTGCCGTCGGAGGGCGGAGC
AGGTTGTTACGACACACCGCCCCCTCCAAGAGTATGTCCGGTTATGATATTGCCGTGTAAAACTGACTCTGAGTGCTCTCCATGTTACTGTGTTAATGGCTCCTGCAGAG
ATCATATGGAGATGAAAAACAAGGTTGGTTTGGTGGCTATGGTGGTTGTGATGGTGGTTATGGCTCACTCCGCCACCACCATCGCCGCCGTGGATGAGCCCATTCAGGTC
CCAACCAACGGCGGAGGAAGTGAATCCGATACACCCAGGGTGTGCCCGGCTACACTTTTGCCATGCAAAACTGACTCTGAGTGCTCTCCATGCAACTGTGTCAATGGCTC
CTGCGTTTGA
Protein sequenceShow/hide protein sequence
MEMNKKVALLVMVVLAAVMAQSAAVDEAIQLPSEGGAGCYDTPPPPRVCPVMILPCKTDSECSPCYCVNGSCRDHMEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQV
PTNGGGSESDTPRVCPATLLPCKTDSECSPCNCVNGSCV