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CmoCh16G003480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G003480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUncharacterised protein family SERF
Genome locationCmo_Chr16:1606933..1610748
RNA-Seq ExpressionCmoCh16G003480
SyntenyCmoCh16G003480
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR026939 - ZNF706/At2g23090 superfamily
IPR039438 - At2g23090-like, zinc-binding domain
IPR039713 - At2g23090-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152272.1 uncharacterized protein At2g23090 [Cucumis sativus]2.9e-3497.4Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPKSDVF+CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
XP_022922955.1 uncharacterized protein At2g23090-like [Cucurbita moschata]5.9e-35100Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
XP_022991683.1 uncharacterized protein At2g23090-like [Cucurbita maxima]1.5e-3394.81Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARE+NLEKQKG+KGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPKSDVF+CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
XP_023524477.1 uncharacterized protein At2g23090-like [Cucurbita pepo subsp. pepo]6.5e-3496.1Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARE+NLEKQKGAKGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPKSDVF+CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
XP_023552184.1 uncharacterized protein At2g23090-like [Cucurbita pepo subsp. pepo]5.9e-35100Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
TrEMBL top hitse value%identityAlignment
A0A0A0KV37 Uncharacterized protein1.4e-3497.4Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPKSDVF+CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
A0A1S3BZP7 uncharacterized protein At2g23090-like1.4e-3497.4Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPKSDVF+CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
A0A6J1EA95 uncharacterized protein At2g23090-like2.9e-35100Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
A0A6J1J8V9 uncharacterized protein At2g23090-like2.9e-35100Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
A0A6J1JX00 uncharacterized protein At2g23090-like7.1e-3494.81Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGNGQKAKMARE+NLEKQKG+KGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPKSDVF+CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
SwissProt top hitse value%identityAlignment
O64818 Uncharacterized protein At2g230905.0e-2980.77Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGA-KGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGN QK+ MAR +NLEK K A KGSQL++NKKAM+IQCKVCMQTFICTTSEVKCREHAEAKHPK+DV +CFPHL+K
Subjt:  MGGGNGQKAKMARERNLEKQKGA-KGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
Arabidopsis top hitse value%identityAlignment
AT2G23090.1 Uncharacterised protein family SERF3.6e-3080.77Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGA-KGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK
        MGGGN QK+ MAR +NLEK K A KGSQL++NKKAM+IQCKVCMQTFICTTSEVKCREHAEAKHPK+DV +CFPHL+K
Subjt:  MGGGNGQKAKMARERNLEKQKGA-KGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAGGCAACGGTCAGAAGGCTAAGATGGCTCGCGAGAGAAACTTAGAGAAACAAAAAGGCGCCAAGGGAAGCCAGCTCGATTCTAACAAAAAAGCTATGACCAT
TCAGTGCAAGGTGTGCATGCAAACATTCATTTGCACAACCTCAGAGGTGAAATGTAGGGAGCATGCTGAAGCAAAGCACCCCAAATCTGATGTTTTCTCCTGTTTTCCCC
ATCTTCAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
TATTGTATAGATTCATCCCCCGAGTGGTGAGTGCATACCGCGTTAGCAGTCGAAAAACCCTTTATCAGCGGTCTCCTCTGTTTCCTTTCAGCAAAATCGTCGCCTCATCC
GCTCCCTATTTCTCCTCAATCGATTCAGCCATGGGAGGAGGCAACGGTCAGAAGGCTAAGATGGCTCGCGAGAGAAACTTAGAGAAACAAAAAGGCGCCAAGGGAAGCCA
GCTCGATTCTAACAAAAAAGCTATGACCATTCAGTGCAAGGTGTGCATGCAAACATTCATTTGCACAACCTCAGAGGTGAAATGTAGGGAGCATGCTGAAGCAAAGCACC
CCAAATCTGATGTTTTCTCCTGTTTTCCCCATCTTCAAAAGTGA
Protein sequenceShow/hide protein sequence
MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVFSCFPHLQK