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CmoCh16G003530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G003530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionhomeobox protein HAT3.1 isoform X2
Genome locationCmo_Chr16:1638212..1638431
RNA-Seq ExpressionCmoCh16G003530
SyntenyCmoCh16G003530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57486.1 hypothetical protein Csa_010932 [Cucumis sativus]2.7e-0754.29Show/hide
Query:  RNMIISGG----------RRCAESNGGPDLEDSETKPLYSLFALK-RERTRRTPTTIAKILTLFFQSSIN
        RN+I SGG           + A+SNGGPDLEDSETKPLYSLF L+ + RT +  T IAK LT FFQ  ++
Subjt:  RNMIISGG----------RRCAESNGGPDLEDSETKPLYSLFALK-RERTRRTPTTIAKILTLFFQSSIN
XP_022149327.1 homeobox protein HAT3.1 isoform X2 [Momordica charantia]3.4e-0565.96Show/hide
Query:  ISGGRRCAESNGGPDLEDSETKPLYSLFALK-RERTRRTPTTIAKIL
        +  GR  A  NGGPDLEDSETKPLYSLFAL+ R  T  T  TI KIL
Subjt:  ISGGRRCAESNGGPDLEDSETKPLYSLFALK-RERTRRTPTTIAKIL
TrEMBL top hitse value%identityAlignment
A0A0A0LBT3 Uncharacterized protein1.3e-0754.29Show/hide
Query:  RNMIISGG----------RRCAESNGGPDLEDSETKPLYSLFALK-RERTRRTPTTIAKILTLFFQSSIN
        RN+I SGG           + A+SNGGPDLEDSETKPLYSLF L+ + RT +  T IAK LT FFQ  ++
Subjt:  RNMIISGG----------RRCAESNGGPDLEDSETKPLYSLFALK-RERTRRTPTTIAKILTLFFQSSIN
A0A6J1D7M5 homeobox protein HAT3.1 isoform X21.6e-0565.96Show/hide
Query:  ISGGRRCAESNGGPDLEDSETKPLYSLFALK-RERTRRTPTTIAKIL
        +  GR  A  NGGPDLEDSETKPLYSLFAL+ R  T  T  TI KIL
Subjt:  ISGGRRCAESNGGPDLEDSETKPLYSLFALK-RERTRRTPTTIAKIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAATATGATTATTAGCGGCGGCAGACGGTGCGCAGAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCGCGCTGAAAAG
AGAAAGAACAAGAAGAACACCCACCACCATCGCCAAAATTCTTACACTTTTCTTCCAAAGCTCCATAAATAAACATCTCCACCACCAACTAGATCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCAATATGATTATTAGCGGCGGCAGACGGTGCGCAGAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCGCGCTGAAAAG
AGAAAGAACAAGAAGAACACCCACCACCATCGCCAAAATTCTTACACTTTTCTTCCAAAGCTCCATAAATAAACATCTCCACCACCAACTAGATCCGTAG
Protein sequenceShow/hide protein sequence
MRNMIISGGRRCAESNGGPDLEDSETKPLYSLFALKRERTRRTPTTIAKILTLFFQSSINKHLHHQLDP