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CmoCh16G003570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G003570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:1647854..1650628
RNA-Seq ExpressionCmoCh16G003570
SyntenyCmoCh16G003570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576932.1 hypothetical protein SDJN03_24506, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3888.17Show/hide
Query:  MAACRCTWRSLLISTAHNLSLAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
        MAACRCTWRSLLISTAHNL L+      +LDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAE EDSS RIQ
Subjt:  MAACRCTWRSLLISTAHNLSLAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
XP_022922828.1 uncharacterized protein LOC111430694 [Cucurbita moschata]6.5e-47100Show/hide
Query:  MAACRCTWRSLLISTAHNLSLAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
        MAACRCTWRSLLISTAHNLSLAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
Subjt:  MAACRCTWRSLLISTAHNLSLAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
XP_022984270.1 uncharacterized protein LOC111482625 isoform X4 [Cucurbita maxima]1.6e-2167.02Show/hide
Query:  MAACRCTWRSLLISTAHNLS-LAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
        MAACRCTWRSLLISTAHNLS LAGGVVSY    P      K              G  +   LFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
Subjt:  MAACRCTWRSLLISTAHNLS-LAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
XP_023551738.1 uncharacterized protein LOC111809622 isoform X1 [Cucurbita pepo subsp. pepo]7.7e-1663.95Show/hide
Query:  RSLLISTAHNLS-LAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
        RSLLISTAHNLS LAGGVVSY    P      K              G  +   LFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
Subjt:  RSLLISTAHNLS-LAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
TrEMBL top hitse value%identityAlignment
A0A6J1E7W7 uncharacterized protein LOC1114306943.1e-47100Show/hide
Query:  MAACRCTWRSLLISTAHNLSLAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
        MAACRCTWRSLLISTAHNLSLAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
Subjt:  MAACRCTWRSLLISTAHNLSLAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
A0A6J1J875 uncharacterized protein LOC111482625 isoform X47.8e-2267.02Show/hide
Query:  MAACRCTWRSLLISTAHNLS-LAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
        MAACRCTWRSLLISTAHNLS LAGGVVSY    P      K              G  +   LFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
Subjt:  MAACRCTWRSLLISTAHNLS-LAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTTGCAGGTGCACTTGGAGATCTTTATTGATTTCTACGGCCCATAACCTAAGCTTAGCTGGTGGTGTTGTTTCCTACAATCTGGACTGGCCCCCTCCTGCTTC
CTTTGATAAAAACTTGTCAGGAAACCCAAAATACTACCTGCTATTCAACAATGGGGACCTTCAAACCCCATCACTATTCTTCCCCCCACCCTCCATAAGGAACTTGATTG
GAAATGCAACAAGTCTTGGAAAACGGGCTGAGTTTGAAGATTCCTCCTTAAGGATTCAGGTTTTTTCTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGCTGCTTGCAGGTGCACTTGGAGATCTTTATTGATTTCTACGGCCCATAACCTAAGCTTAGCTGGTGGTGTTGTTTCCTACAATCTGGACTGGCCCCCTCCTG
CTTCCTTTGATAAAAACTTGTCAGGAAACCCAAAATACTACCTGCTATTCAACAATGGGGACCTTCAAACCCCATCACTATTCTTCCCCCCACCCTCCATAAGGAACTTG
ATTGGAAATGCAACAAGTCTTGGAAAACGGGCTGAGTTTGAAGATTCCTCCTTAAGGATTCAGGTTTTTTCTTTTTGACAGTCTTCTGAGGCAAGTCTCCCTACATTGCC
TTTTATTTCACATTCACTTTTACATGTAAAGAATGAGGACCCGAAAGAAATCACTTGGTTGTAGAGATATGTGTTGCCAACATCAGCCTTGGAAAAGAATCCCACAAAAG
TAGTTTTAAAAGTGATTCGGTT
Protein sequenceShow/hide protein sequence
MAACRCTWRSLLISTAHNLSLAGGVVSYNLDWPPPASFDKNLSGNPKYYLLFNNGDLQTPSLFFPPPSIRNLIGNATSLGKRAEFEDSSLRIQVFSF