CuGenDBv2

Gene ID	CmoCh16G003810
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	EKC/KEOPS complex subunit Tprkb
Genome location	Cmo_Chr16:1762999..1764387
RNA-Seq Expression	CmoCh16G003810
Synteny	CmoCh16G003810
Gene Ontology terms	GO:0000722 - telomere maintenance via recombination (biological process) GO:0002949 - tRNA threonylcarbamoyladenosine modification (biological process) GO:0000408 - EKC/KEOPS complex (cellular component) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component)
InterPro domains	IPR013926 - CGI121/TPRKB IPR036504 - CGI121/TPRKB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6576954.1 hypothetical protein SDJN03_24528, partial [Cucurbita argyrosperma subsp. sororia]

9.4e-103

98.92

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLFYTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEINLEELGE
        MQAGTLEPEAAFL+ASLLWFYFVCLRNPPPPLFYTCIQVEGFSVYNYSGSKHITEFLK CGISGSSSHALVARFNASPDEMKAIEKLVHGKEINLEELGE
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLFYTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEINLEELGE

Query:  RADQAWIRKHFKITGPELTVSSSHVESLRGMPCSCKTCNKFHLWLLAHSHSSIGECIDLFYSTITFRLMMSIWNVQMIMLFMSDGK
        RADQAWIRKHFKITGPELTVSSSHVESLRGMPCSCKTCNKFHLWLLAHSHSSIGECIDLFYSTITFRLMMSIWNVQMIMLFMSDGK
Subjt:  RADQAWIRKHFKITGPELTVSSSHVESLRGMPCSCKTCNKFHLWLLAHSHSSIGECIDLFYSTITFRLMMSIWNVQMIMLFMSDGK

XP_008456125.1 PREDICTED: EKC/KEOPS complex subunit Tprkb [Cucumis melo]

7.1e-34

67.19

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        MQAGTLEPE AFLNASL+   F  L      L        T   +    VYNYSGSKHITE L+ CGIS SSS+ L A FN SPDE+KAIEKLVHGKEIN
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEELGERADQA I+KHFKITGPELT+SS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

XP_022149131.1 EKC/KEOPS complex subunit TPRKB [Momordica charantia]

9.3e-34

67.19

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        MQAGTLEPE AFLNASL+   F  L +    L        T        VYNYSGSKHITE LK CGIS +SS+ L ARFNASP EM+A+EKLVHGKEI+
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEELGERADQA I+KHFKITGPELTVSS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

XP_023524844.1 EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita pepo subsp. pepo]

2.4e-34

67.97

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        MQAGTLEPE AFLNASL+   F  L      L        T   +    VYNYSGSKHITE LK CGIS SSS+ L ARFNASPDE KAIEKLVHG+EIN
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEELG RADQA I+KHFKITGPELT+SS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

XP_038898952.1 EKC/KEOPS complex subunit TPRKB [Benincasa hispida]

1.9e-34

68.75

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        MQAGTLEPE AFLNASL+   F  L      L        T   +    VYNYSGSKHITE LK CGIS SSS+ L A FNASPDEMKAIEKLVHG EIN
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEELGERADQA I+KHFKITGPELT+SS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C2H5 EKC/KEOPS complex subunit Tprkb

3.4e-34

67.19

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        MQAGTLEPE AFLNASL+   F  L      L        T   +    VYNYSGSKHITE L+ CGIS SSS+ L A FN SPDE+KAIEKLVHGKEIN
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEELGERADQA I+KHFKITGPELT+SS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

A0A5D3DQY2 EKC/KEOPS complex subunit Tprkb

3.4e-34

67.19

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        MQAGTLEPE AFLNASL+   F  L      L        T   +    VYNYSGSKHITE L+ CGIS SSS+ L A FN SPDE+KAIEKLVHGKEIN
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEELGERADQA I+KHFKITGPELT+SS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

A0A6J1D7F7 EKC/KEOPS complex subunit TPRKB

4.5e-34

67.19

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        MQAGTLEPE AFLNASL+   F  L +    L        T        VYNYSGSKHITE LK CGIS +SS+ L ARFNASP EM+A+EKLVHGKEI+
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEELGERADQA I+KHFKITGPELTVSS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

A0A6J1FNX6 EKC/KEOPS complex subunit Tprkb isoform X1

5.9e-34

67.19

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        MQA TLEPE AFLNASL+   F  L      L        T   +    VYNYSGSKHITE LK CGIS SSS+ L ARFNASPDE KAIEKLVHG+EIN
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEELG RADQA I+KHFKITGPELT+SS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

A0A6J1IY73 EKC/KEOPS complex subunit Tprkb

5.9e-34

67.19

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        MQAGTLEPE AFLNASL+   F  L               T   +    VYNYSGSKHITE LK CGIS SSS+ L ARFNASPDE KAIEKLVHG+EIN
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEELG RADQA I+KHFKITGPELT+SS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G34412.1 CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

2.4e-24

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Query:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN
        M  G+L+ E +FLNASL+   F  L      L        +   +    VYNYSGSKHITE LK CGIS ++++ L ARFNASP EM+ + KL++GKEI+
Subjt:  MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLF------YTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEIN

Query:  LEELGERADQAWIRKHFKITGPELTVSS
        LEEL   A+QA I KH+KIT  EL +SS
Subjt:  LEELGERADQAWIRKHFKITGPELTVSS

Sequences

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CDS sequence

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ATGCAAGCTGGAACTCTGGAACCGGAAGCTGCATTTCTCAATGCTTCTCTTCTATGGTTCTATTTTGTATGCTTACGAAATCCACCCCCACCACTCTTTTACACTTGTAT
CCAAGTCGAGGGATTCTCTGTCTACAATTATTCGGGTTCAAAGCATATTACAGAGTTTTTAAAAATATGTGGAATTTCTGGTAGCTCTTCTCATGCCCTTGTGGCTCGTT
TTAATGCTTCCCCTGATGAGATGAAGGCCATCGAGAAACTAGTACATGGAAAAGAGATCAACCTAGAGGAATTGGGAGAGAGAGCAGACCAAGCTTGGATACGAAAGCAT
TTTAAGATAACTGGACCCGAGTTGACGGTATCATCATCACATGTAGAATCGCTGCGCGGGATGCCTTGTAGCTGCAAAACCTGCAACAAGTTTCATCTTTGGCTGTTGGC
ACACAGTCACTCCTCTATAGGTGAATGCATTGATTTGTTTTACAGTACAATTACTTTTAGGTTGATGATGTCTATATGGAATGTTCAAATGATTATGCTGTTTATGTCTG
ATGGGAAGTGA

mRNA sequence

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Protein sequence

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MQAGTLEPEAAFLNASLLWFYFVCLRNPPPPLFYTCIQVEGFSVYNYSGSKHITEFLKICGISGSSSHALVARFNASPDEMKAIEKLVHGKEINLEELGERADQAWIRKH
FKITGPELTVSSSHVESLRGMPCSCKTCNKFHLWLLAHSHSSIGECIDLFYSTITFRLMMSIWNVQMIMLFMSDGK

CmoCh16G003810 (gene) of Cucurbita moschata (Rifu) v1 genome