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CmoCh16G003950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G003950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:1823225..1827103
RNA-Seq ExpressionCmoCh16G003950
SyntenyCmoCh16G003950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TQD99954.1 hypothetical protein C1H46_014458 [Malus baccata]8.2e-0539.17Show/hide
Query:  EDDGEIILKLRRVIIETLKKQMDGFSEIFEGRGR--EGVIEKLLER-RINGVDSRNLNGSLFVHVDGGSGGTSHSDGRRAATGKAGIGIA--AELGSRWR
        E +GE++L+L R ++E  K++  GF +   G  R  EG +E +  +  I+G D   L  ++FV V+GG GGT H+   RAA  +AGIG++  AE+  R R
Subjt:  EDDGEIILKLRRVIIETLKKQMDGFSEIFEGRGR--EGVIEKLLER-RINGVDSRNLNGSLFVHVDGGSGGTSHSDGRRAATGKAGIGIA--AELGSRWR

Query:  W---RIERSLRMAAAVSLHL
        W    +ER    AAA + HL
Subjt:  W---RIERSLRMAAAVSLHL
TrEMBL top hitse value%identityAlignment
A0A540MMG4 Uncharacterized protein4.0e-0539.17Show/hide
Query:  EDDGEIILKLRRVIIETLKKQMDGFSEIFEGRGR--EGVIEKLLER-RINGVDSRNLNGSLFVHVDGGSGGTSHSDGRRAATGKAGIGIA--AELGSRWR
        E +GE++L+L R ++E  K++  GF +   G  R  EG +E +  +  I+G D   L  ++FV V+GG GGT H+   RAA  +AGIG++  AE+  R R
Subjt:  EDDGEIILKLRRVIIETLKKQMDGFSEIFEGRGR--EGVIEKLLER-RINGVDSRNLNGSLFVHVDGGSGGTSHSDGRRAATGKAGIGIA--AELGSRWR

Query:  W---RIERSLRMAAAVSLHL
        W    +ER    AAA + HL
Subjt:  W---RIERSLRMAAAVSLHL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACTCAAACTCGGCCAATGCTACCATGTGCGGCCCCATGACATGCTAACAGGTACTCACTTCAGAAAGATAGTTCACTTGAGTTTCACCCTGAAAAATAGA
AACCATTTACATGATCAGCAAATCATTCTGTACACGATAGTTCCTGGCAGGCAGCCAAGCAAAACCTTCATCAACAAAATGAAAACTGAAATGGGATTTGAGGAC
GATGGGGAGATCATCCTCAAGCTTCGTCGGGTGATAATCGAGACATTGAAGAAGCAAATGGATGGTTTCAGTGAGATCTTTGAGGGAAGGGGGAGAGAAGGAGTG
ATTGAAAAGCTCCTTGAGAGACGAATTAATGGTGTTGACAGCAGAAATTTGAACGGCTCGCTCTTTGTACATGTCGATGGAGGCAGCGGCGGGACGAGCCATTCC
GATGGAAGAAGGGCGGCTACTGGCAAAGCTGGCATCGGAATCGCGGCGGAATTGGGGAGTAGGTGGCGGTGGAGGATTGAAAGATCCCTTAGGATGGCGGCGGCC
GTTTCCCTTCATCTAGTCTCCGGTCGATGTCTTCACAGTCTCCGGCGGGTACTTTTTCTGAAATTTCAATTTGAAAGATGGCATTCGGAAGGGGGCGGAGGGAAC
TTTGATTTATATCGCCACGTCATAGTCACGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATACTCAAACTCGGCCAATGCTACCATGTGCGGCCCCATGACATGCTAACAGGTACTCACTTCAGAAAGATAGTTCACTTGAGTTTCACCCTGAAAAATAGA
AACCATTTACATGATCAGCAAATCATTCTGTACACGATAGTTCCTGGCAGGCAGCCAAGCAAAACCTTCATCAACAAAATGAAAACTGAAATGGGATTTGAGGAC
GATGGGGAGATCATCCTCAAGCTTCGTCGGGTGATAATCGAGACATTGAAGAAGCAAATGGATGGTTTCAGTGAGATCTTTGAGGGAAGGGGGAGAGAAGGAGTG
ATTGAAAAGCTCCTTGAGAGACGAATTAATGGTGTTGACAGCAGAAATTTGAACGGCTCGCTCTTTGTACATGTCGATGGAGGCAGCGGCGGGACGAGCCATTCC
GATGGAAGAAGGGCGGCTACTGGCAAAGCTGGCATCGGAATCGCGGCGGAATTGGGGAGTAGGTGGCGGTGGAGGATTGAAAGATCCCTTAGGATGGCGGCGGCC
GTTTCCCTTCATCTAGTCTCCGGTCGATGTCTTCACAGTCTCCGGCGGGTACTTTTTCTGAAATTTCAATTTGAAAGATGGCATTCGGAAGGGGGCGGAGGGAAC
TTTGATTTATATCGCCACGTCATAGTCACGCACTGA
Protein sequenceShow/hide protein sequence
MILKLGQCYHVRPHDMLTGTHFRKIVHLSFTLKNRNHLHDQQIILYTIVPGRQPSKTFINKMKTEMGFEDDGEIILKLRRVIIETLKKQMDGFSEIFEGRGREGV
IEKLLERRINGVDSRNLNGSLFVHVDGGSGGTSHSDGRRAATGKAGIGIAAELGSRWRWRIERSLRMAAAVSLHLVSGRCLHSLRRVLFLKFQFERWHSEGGGGN
FDLYRHVIVTH