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CmoCh16G004280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G004280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionE1B protein, small T-antigen like
Genome locationCmo_Chr16:2038008..2038445
RNA-Seq ExpressionCmoCh16G004280
SyntenyCmoCh16G004280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456033.1 PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]1.8e-7295.8Show/hide
Query:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
        +S GF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS HDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
Subjt:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_022923014.1 uncharacterized protein LOC111430823 isoform X2 [Cucurbita moschata]2.6e-76100Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_022984157.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima]1.0e-7599.31Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS HDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_023552104.1 uncharacterized protein LOC111809873 isoform X1 [Cucurbita pepo subsp. pepo]6.5e-7597.93Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGF+LICMLHSLIALTCGALMMFYSHEV+VFGHGPETAIKLQGSS HDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

XP_038875201.1 uncharacterized protein LOC120067716 [Benincasa hispida]1.3e-7296.5Show/hide
Query:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
        +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS HDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
Subjt:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        WRVYFERKLEDLA DWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

TrEMBL top hitse value%identityAlignment
A0A1S3C293 uncharacterized protein LOC1034960848.5e-7395.8Show/hide
Query:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
        +S GF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS HDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
Subjt:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1CPH9 uncharacterized protein LOC1110129274.7e-7194.37Show/hide
Query:  SGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIW
        S GFLLICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSS HDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMAIW
Subjt:  SGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIW

Query:  RVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        RVYFERKLEDLA+DWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  RVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1E545 uncharacterized protein LOC111430823 isoform X21.3e-76100Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1FMS5 uncharacterized protein LOC1114468811.2e-7194.41Show/hide
Query:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI
        +S GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS  DQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMAI
Subjt:  SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  WRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

A0A6J1J9R2 uncharacterized protein LOC111482570 isoform X24.8e-7699.31Show/hide
Query:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
        MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS HDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM
Subjt:  MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
Subjt:  AIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53035.1 unknown protein1.2e-5065.47Show/hide
Query:  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVY
        F +IC+LHS+IALT G LMMFY+ +  +FG G E A KL+GS+ HD+LLI+ S SFSGLLLF +G +LFMV+FVKD+EF SFFA G V+L++ MA+WRV 
Subjt:  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVY

Query:  FERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        FE K+EDLA +WP+Q +GD+ LA+SWVFFLVYSWREKYD
Subjt:  FERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

AT3G15358.1 unknown protein2.9e-4964.03Show/hide
Query:  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVY
        F +IC+LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+ HD+ LI+ S SFSGLLLF +G +LFMV+FVKDREF SFFA G V+L++ MA+WRV 
Subjt:  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVY

Query:  FERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD
        FE K+EDLA + P+Q +GD+ LA+SWVFFLVY+WREKYD
Subjt:  FERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCATCTGGGGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGCCA
TGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCTCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTT
TATTCATGGTGGCATTTGTCAAAGATAGAGAGTTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGAAAG
CTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCATCTGGGGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGCCA
TGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCTCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTT
TATTCATGGTGGCATTTGTCAAAGATAGAGAGTTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGAAAG
CTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA
Protein sequenceShow/hide protein sequence
MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSSHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERK
LEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD